rna6737, rna6737 (mRNA) Nannochloropsis gaditana

Overview
Namerna6737
Unique Namerna6737
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length357
Alignment locationCM002469.1:384393..385007 -

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Properties
Property NameValue
Productatp-dependent dna helicase q1
Orig transcript idgnl|cribi|Naga_100027g46.147.mrna
Orig protein idgnl|cribi|Naga_100027g46.147
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:384393..385007 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100027g46gene6514Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6737rna6737-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23969.1cds6721Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6737 ID=rna6737|Name=rna6737|organism=Nannochloropsis gaditana|type=mRNA|length=357bp
ATGTACTCGATCATTGTTTACCTTGTCGTGGGTGATCGTGCTACGGAAGT
GGAGCGAGGGAGGACCGAGGTTTGGATGGACGTAGCCGAGACATTGTCGC
TTGGATCAGCAGCCCGGATGGTAATGCATCATCCTGATGATTGTACCGTT
GCTGGGCGTAAAAAACGAAAAAAGGAGGAGCCATATGCCAGCACTTTTAC
GAGAAAATTACGTGAAATTGTCGAAGTGTCATCGGAAAACGAGGGCGATG
TAGAGCGGAGAGAGGAAGATGTACGGGAAAAAGGAAGCGAGGCAAAAACA
AGGGCTGTGTGCTTTTCTGACGGTACTCAAGGACTTGCGGCAGATGGTAG
ACTCTAA
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protein sequence of rna6737

>rna6737-protein ID=rna6737-protein|Name=rna6737|organism=Nannochloropsis gaditana|type=polypeptide|length=186bp
MAESREGVSEELQMVEHKLGEHQRRLGALMAGGKKLWDHWASEAFPWSNK
VLKLEDGVFGISVPWRCHQKEIINATMACADTFVIMRTDGGKSLCSQLPA
SMPGKGVGIVISPLLSLISDQVYSLETIAPGGSAMLAGSATSEESGQVFR
RMEDPRRSLRLVYVTLEKIIKSKLFVSTLEALNDAQ
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mRNA from alignment at CM002469.1:384393..385007-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6737 ID=rna6737|Name=rna6737|organism=Nannochloropsis gaditana|type=mRNA|length=615bp|location=Sequence derived from alignment at CM002469.1:384393..385007- (Nannochloropsis gaditana)
ATGGCTGAATCCAGAGAAGGTGTAAGTGAGGAACTACAGATGGTGGAACA TAAATTAGGCGAGCATCAGCGTCGATTGGGTGCTTTGATGGCCGGGGGAA AAAAGTTGTGGGACCGTAAGGTGACTTAGACAAAATCACTTCAAGTCCCG ATCGTTTCCACAAGTGTAGACTGGGCGAGCGAAGCATTTCCCTGGTCAAA CAAAGTGCTGAAATTGGAAGATGGGGTTTTCGGTATCTCTGTACCGTGGC GGTGTCATCAAAAGGAAATCATAAACGCCACAATGGCTTGCGCGGATACA TTTGTGATCATGCGCACAGATGGCGGAAAGAGTCTCTGTTCCCAGCTGCC TGCGTCAATGCCAGGAAAGGGTGTCGGCATTGTCATATCTCCCCTTCTTT CACTTATATCTGACCAAGTGTATAGCCTTGAAACAATTGCTCCCGGAGGA AGTGCCATGTTGGCTGGAAGTGCGACGAGTGAAGAATCTGGGCAAGTATT TCGTCGAATGGAAGACCCGCGACGTTCCCTGAGACTTGTTTATGTGACGC TGGAAAAGATAATCAAGAGCAAGCTCTTTGTTTCCACACTGGAAGCCTTA AACGATGCACAATGA
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Coding sequence (CDS) from alignment at CM002469.1:384393..385007-

>rna6737 ID=rna6737|Name=rna6737|organism=Nannochloropsis gaditana|type=CDS|length=1122bp|location=Sequence derived from alignment at CM002469.1:384393..385007- (Nannochloropsis gaditana)
ACTGGGCGAGCGAAGCATTTCCCTGGTCAAACAAAGTGCTGAAATTGGAA
GATGGGGTTTTCGGTATCTCTGTACCGTGGCGGTGTCATCAAAAGGAAAT
CATAAACGCCACAATGGCTTGCGCGGATACATTTGTGATCATGCGCACAG
ATGGCGGAAAGAGTCTCTGTTCCCAGCTGCCTGCGTCAATGCCAGGAAAG
GGTGTCGGCATTGTCATATCTCCCCTTCTTTCACTTATATCTGACCAAGT
GTATAGCCTTGAAACAATTGCTCCCGGAGGAAGTGCCATGTTGGCTGGAA
GTGCGACGAGTGAAGAATCTGGGCAAGTATTTCGTCGAATGGAAGACCCG
CGACGTTCCCTGAGACTTGTTTATGTGACGCTGGAAAAGATAATCAAGAG
CAAGCTCTTTGTTTCCACACTGGAAGCCTTAAACGATGCACAATGAATGG
CTGAATCCAGAGAAGGTGTAAGTGAGGAACTACAGATGGTGGAACATAAA
TTAGGCGAGCATCAGCGTCGATTGGGTGCTTTGATGGCCGGGGGAAAAAA
GTTGTGGGACCACTGGGCGAGCGAAGCATTTCCCTGGTCAAACAAAGTGC
TGAAATTGGAAGATGGGGTTTTCGGTATCTCTGTACCGTGGCGGTGTCAT
CAAAAGGAAATCATAAACGCCACAATGGCTTGCGCGGATACATTTGTGAT
CATGCGCACAGATGGCGGAAAGAGTCTCTGTTCCCAGCTGCCTGCGTCAA
TGCCAGGAAAGGGTGTCGGCATTGTCATATCTCCCCTTCTTTCACTTATA
TCTGACCAAGTGTATAGCCTTGAAACAATTGCTCCCGGAGGAAGTGCCAT
GTTGGCTGGAAGTGCGACGAGTGAAGAATCTGGGCAAGTATTTCGTCGAA
TGGAAGACCCGCGACGTTCCCTGAGACTTGTTTATGTGACGCTGGAAAAG
ATAATCAAGAGCAAGCTCTTTGTTTCCACACTGGAAGCCTTAAACGATGC
ACAATGAATGGCTGAATCCAGAGAAGGTGTAAGTGAGGAACTACAGATGG
TGGAACATAAATTAGGCGAGCATCAGCGTCGATTGGGTGCTTTGATGGCC
GGGGGAAAAAAGTTGTGGGACC
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Synonyms
Publications