rna6736, rna6736 (mRNA) Nannochloropsis gaditana

Overview
Namerna6736
Unique Namerna6736
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1950
Alignment locationCM002469.1:382644..383000 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100027g43.125.mrna
Orig protein idgnl|cribi|Naga_100027g43.125
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:382644..383000 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100027g43gene6513Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23947.1cds6720Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6736rna6736-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6736 ID=rna6736|Name=rna6736|organism=Nannochloropsis gaditana|type=mRNA|length=1950bp
TGAGGTAGTCCCTGCTTGTGATGAGGAGGGGCGCCCGGGGACACGAGGAG
GAGAAGAAGGAGGGGAGCACCACAAGTTGTTGGCGGCGCGGTGTGGACGA
AGTGGACGAGAAGCACGGGACTGGGGAAGGAGCAGGGAGCGGGTAGAGGA
GCGTGGGGATAGTACATGAAAGGGAGGAGCACCTTGTGCGCCCAAGCTGA
ACCCTGACTCTTTTTGAACAACACAAAGCAAGAAACAACAAACCATGTAG
CACTTACAAGGCATATACCCATCAAAGAAGGCTTCGTCAAGGAAGAGAAA
GCTGGCTGAAGTGTTGAAATAAAAGACAGTAACTTGGAAAGAAATACAGT
ACTGGCACATGGTACTACGCGGGCGGAGCGAGACGTTGATGCCACAGGTG
CAGCACTTTTTGACAAGACGCATATCAGCCAGACCAATTTTAAGCTGGAG
ACTGCTGGCGACTGTTTCTGGGCCCCGGCCTCTGCCAGCGACGCTTTTCT
CCAGATACGTAGTGGAGCCCCGAAAAGTGACTATTGTTGGAGCACCTCTC
GCCGATGGACAGCCGCTTTTGGGCGTCGATCGCGGTCCCACTTTTATTCG
TAAGCGTGGCTTGGTGCAACGACTTGAAAGGGATGCCTGGAGGGTGGAAG
ATCTTGGCGACTTGGATTTTGAGATGCGGAGCGGCCTTGGGCGACAGGAA
GATTTCGCGGAGGGAGCTGCACATGGTTCCACGAAACGCGCCAAAATGGT
AGGGCATGCTAATCGCATACTGTATGAGGTCACGCACGAGCATGCTCGGC
AGGATAAGCTGGTCCTAACGTTGGGCGGCGACCACAGCATTGGCGTGGGA
TCTGTCGCTGGGGCTCTCAAGGGCCGGCCCGAGACGGCTATAATCTGGGT
GGACGCGCATGCGGATATAAACAGCCGCAACACATCAGAGTCGGGCCACT
TGCATGGGATGGTTTTAAGCTTTTTGATGAACTTAGACAACTCGCGCAAC
ATGAAGGGGTTTCACTGGCTCAACGACGAGTCCATTCCTGTACTCTTACC
CACGCGCTTGGTCTATGTGGGGCTTCGAGACCTGGACAAAGGAGAGAAGG
CATTTATCCGGAGTCTTGGTATTAAGGCCTACACCATGCATGAAGTTGAT
AAATTTGGAATAGGGAAGATCATGGAGATGGTCCTCGATCATATACTGGG
AAGGACAGATCGGCCGCTCCATCTGAGCTTTGATATCGACGCCGTCGACC
CCCTTTATGCACCCTCGACAGGCACGCGTGTTGCCGGCGGACTGAGCTAT
CGGGAGGCTTACTATATTTGCGAGGAGGTAGCACACTCCGGGTGCCTCGC
ATCCATGGATCTCGTCGAGGTCAACCCCACCTTAACTATGGCGGGTGGCG
ACGAGAGGACTGTGGACATGGCTGTCGGACTCATTTCGTCAGCAACGGGA
AACAGTATCTTATGAAGATATATCCATAAAGACTGGCAGAGAAAGAAGGA
GGTAGATTGCGAATTGCTTTCGATCTCTTAAAATTGTCGAATCGAGGAGT
GAGACGTCCTCCATGGGAAGGCTTTTCAAGAGAGTGGGTGTGTCATTCTT
GTGAACTATACGTGCGAATTCTCTAATGCCCACGACACGCAGGCTGCACA
GATTAAATACATTTATTTACAATTTGGCTTAGAAATTCGCTACATATTTT
AGACAGAGCAAGACACAAACTCTTCTTCTTGATCTGGCCATTTTATGTTT
ACTTCCAGCTTGGAGTCTAAAACGTGGCTTGCTACGACCTCCCTGACCCC
AAAACTTTTTATTAGAGTCTACCATCTGCCGCAAGTCCTTGAGTACCGTC
AGAAAAGCACACAGCCCTTGTTTTTGCCTCGCTTCCTTTTTCCCGTACAT
CTTCCTCTCTCCGCTCTACATCGCCCTCGTTTTCCGATGACACTTCGACA
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protein sequence of rna6736

>rna6736-protein ID=rna6736-protein|Name=rna6736|organism=Nannochloropsis gaditana|type=polypeptide|length=118bp
MYSIIVYLVVGDRATEVERGRTEVWMDVAETLSLGSAARMVMHHPDDCTV
AGRKKRKKEEPYASTFTRKLREIVEVSSENEGDVERREEDVREKGSEAKT
RAVCFSDGTQGLAADGRL
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mRNA from alignment at CM002469.1:382644..383000-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6736 ID=rna6736|Name=rna6736|organism=Nannochloropsis gaditana|type=mRNA|length=357bp|location=Sequence derived from alignment at CM002469.1:382644..383000- (Nannochloropsis gaditana)
ATGTACTCGATCATTGTTTACCTTGTCGTGGGTGATCGTGCTACGGAAGT
GGAGCGAGGGAGGACCGAGGTTTGGATGGACGTAGCCGAGACATTGTCGC
TTGGATCAGCAGCCCGGATGGTAATGCATCATCCTGATGATTGTACCGTT
GCTGGGCGTAAAAAACGAAAAAAGGAGGAGCCATATGCCAGCACTTTTAC
GAGAAAATTACGTGAAATTGTCGAAGTGTCATCGGAAAACGAGGGCGATG
TAGAGCGGAGAGAGGAAGATGTACGGGAAAAAGGAAGCGAGGCAAAAACA
AGGGCTGTGTGCTTTTCTGACGGTACTCAAGGACTTGCGGCAGATGGTAG
ACTCTAA
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Coding sequence (CDS) from alignment at CM002469.1:382644..383000-

>rna6736 ID=rna6736|Name=rna6736|organism=Nannochloropsis gaditana|type=CDS|length=357bp|location=Sequence derived from alignment at CM002469.1:382644..383000- (Nannochloropsis gaditana)
ATGTACTCGATCATTGTTTACCTTGTCGTGGGTGATCGTGCTACGGAAGT
GGAGCGAGGGAGGACCGAGGTTTGGATGGACGTAGCCGAGACATTGTCGC
TTGGATCAGCAGCCCGGATGGTAATGCATCATCCTGATGATTGTACCGTT
GCTGGGCGTAAAAAACGAAAAAAGGAGGAGCCATATGCCAGCACTTTTAC
GAGAAAATTACGTGAAATTGTCGAAGTGTCATCGGAAAACGAGGGCGATG
TAGAGCGGAGAGAGGAAGATGTACGGGAAAAAGGAAGCGAGGCAAAAACA
AGGGCTGTGTGCTTTTCTGACGGTACTCAAGGACTTGCGGCAGATGGTAG
ACTCTAA
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Synonyms
Publications