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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100027g38.165.mrna |
| Orig protein id | gnl|cribi|Naga_100027g38.165 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:363716..365367 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6731 ID=rna6731|Name=rna6731|organism=Nannochloropsis gaditana|type=mRNA|length=1971bp
GGAAAAAGGATCTGACATGTCAAGAATAATTTGCCTGGGCTTGCTTTTAG
CCCTGTGGTCGACAAGAAACCGACTCTCAACGGCCGCGGTTGCCAGCACC
TCAACTCCCACATGGCCTCAAAAAGGGCAACGAAACAGTATGGCAAATCA
AGCCCAAGAACCGTCCGTTACTCCGAGCCGATGGGATTTGAATGCCTTTC
ATGCCTTTGTCAAGGGTCGGACGGGGGGAATTTGTTCGGCGCCAGTGTCT
CTGCCTACAACAAACGTCTATTGGGTACTGCATGGCCAGCTCTCTAATCC
CTTTACAGGGGACGTCATAGCCGAAGTACGAGGTATAGAAGTCGTGCGAT
TTGTGGGCTATGTGCAGGCACCAGGGCAACAAAGAGGGAACATATGTGGA
TCCCATCCTGCCGTAGATCTGCCCAAATCACAAAGTCATGCCATGCCCGG
TACGCGGATGTGCTTGCAATTGAAGGATTCTCAGCCTAAAGTGACGGAGA
CAGGCGAGGAAAAGCGGCACGTTGATATACAAACTGCATCGCTTCAGCGG
TGGTGCGCATTGGCCACCTCAGTATCTGCCAAAACGTTCCGATACTTTGA
GCCTTGCACAGGGCGACCCTTGTTGAGATTTCGACCAGGTCCTCGCGCCA
AAGTTCGAACAGTCCCAGCCGCCATCACAACCAAGCAAGTCATCACATAT
GCCTTGTCACATTCCGGTAGCTTACACTTGGTGGCAGAATCCCTCAATGG
TGGTCTTGTGGCGGTGAAAAATGAAGCTGCCGGGCCAGTGCTAGTGTCAC
AGAAAAGAAAATGTATCTTATGCTTTCCGCCTAAGCCACCAAAGAAATTT
GAACTATCTTTACTCATGTGGCCAGGCTCCAAAAGAGGCAATCGTGATTA
TAGCAGGAATGAAGGCAAAGCTTCAGAAGAGAGAAAGGTGGATGGCAGTA
GACGGAGATTCCCGTGGAGGTCCCTCGTGCAGTTCGGCACTTCTTCTGCG
CAGCCAGCTTGCCGTGAGCTCTACACTCTGACCACGGAGCCGCTGCCCAA
GCAGCGTGGCCGTCGTCCACGGATAAAATATCTTCGTTATGGAGAGGCTC
CTCACTGGTGTGGGGCAGGGAGGGTCTGCCACCTTGCCCTCGACGGCACT
AGGTTCGACCGATTGCAGGATGTTCCCAAGCGTTACAGAGAGCTCTTCTT
TCCCACGACGACAACTGCGCCCTTAACCGACGAAAGCGAGAAGAAAGTAT
CAGCAGAGCTGCCTCCGCAGTCCGTTGAGGCCTTCTTGGAGGAAGCCAGA
GGAGTCCAACGGGCAGAACGCGCTCGGTTTCCCTTTTGCAGGTTCGTCCG
GGAGTTTGGATGACGCCGTTGAGACCGTCAGCCAAAGTGCAATAGCTAGA
GTTTCGAATGAGAAAGCAAGTAATTTTTACAGACTGAACACGCGTTAAAC
GAGCATATTCATTATAATTGGTTGTTAGCTGTTAAGACTTTATTCGTTTA
CAGATTTTTCAAGACATACAAGCCAGCGAGTAAATGAAGGAGAAAAGGTT
TGGGGAAGTGTGAAGACGACTTTAAAAGCCTTGGGCGTCCTCGAGAGCAT
GTAAGAGAGTATATTGGCATCAGATTTCTTGTTGCATCCAATATCCTGCT
TGGTCCATTCAGGCAAAAAAAAGACGAGGCGCCCGCCTGGGACCAGCACA
CTGGCAGCAATATCAATTAGGGCGAAAATCACAGGTATGATAGTCTGCTG
ACGAGCTGTGGCTGCCTTCGTATCTGTCGCAGTTTCTGCTTTTCCAAACA
CCTTAGCCTTGATATTGTAGGGCGGATCGGTCACAATGCTGTCGTAGTAA
CCGGAGCGGAACAGGGGATGAAGCTGACGGGAAAGTATGTCTGCCTGAGT
AAGAACAGGTACTGGGGACGTCAAGGAGTCTACCCACTGGGAGAAATCGT
TTTTATCGTATGCAAATGACT back to topprotein sequence of rna6731 >rna6731-protein ID=rna6731-protein|Name=rna6731|organism=Nannochloropsis gaditana|type=polypeptide|length=379bp
MNKRVEALAHAFKPSLVDVHEELLSKTDHILEVAKSRGWGIFGSQGTEKD
LCLYEAAQYEAQAKELRAAIALLSSTSNNDSMAGAKSKKLIPTSETVLEN
GDLKLTATEQRQEEVDTPITNVTAQSSTNIILKQIKRFLFKRIIDGDLED
AHRTAERIEVLAKCLKTQSELDLAHWKTGGGYVKPEEVQLLYLVRQIIIC
EGEKERFHDKHPNLNRHNESELQGESVDISKRLLRYKSLFHIQTGSWFTV
YDNDYQVAADPHFPESRANPFHVQCFFDGTIREEDLQRNSIRERIQEAEN
KRRPLFSGLRSVTWGSKFTSSRSMDGDDSVFSLQGFWSQMTSSFFFLGQM
FIPSSFFRSIKKLEVDLSRTEGKSSDLQV back to topmRNA from alignment at CM002469.1:363716..365367+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6731 ID=rna6731|Name=rna6731|organism=Nannochloropsis gaditana|type=mRNA|length=1652bp|location=Sequence derived from alignment at CM002469.1:363716..365367+ (Nannochloropsis gaditana)
AGGACTGCGCGCTAGTGCACGGCACCATTCACATGTGTAGACCTTCCCTT
CACATCATGTGTCATATGCGGTTCATGTAATCGATTTATTTCGACATTCG
TACAGGTCATCTTCTGCGCCAGGGTTGCAGGCCCATACTCATTTCGGTCT
AGCGTACAGGCGTTCTGGCTCGCTTGCTATCGTCTTTGATGAATAAACGG
GTGGAGGCACTCGCTCATGCTTTTAAACCTTCTTTGGTTGATGTTCATGA
AGAACTTTTGAGTAAGACTGATCACATCCTCGAAGTTGCGAAGTCCCGAG
GGTGGGGAATTTTCGGTAGCCAAGGCACGGAAAAGGATCTTTGCTTGTAT
GAGGCCGCTCAATACGAAGCTCAAGCCAAAGAGCTTCGAGCTGCTATCGC
ATTGCTTTCCTCTACGAGCAATAACGACTCCATGGCGGGAGCAAAGAGCA
AAAAACTGATTCCTACATCAGAAACGGTGCTTGAAAACGGAGACCTAAAG
TTGACAGCGACCGAGCAACGTCAAGAAGAGGTAGACACTCCCATCACAAA
TGTCACAGCTCAATCTTCTACAAATATCATTTTGAAACAAATCAAAAGAT
TTTTGTTTAAACGCATCATAGATGGCGATTTAGAAGATGCTCATCGGACC
GCTGAGAGAATTGAGGTTCTCGCTAAATGCTTGAAGACACAGTCGGAGTT
GGATTTGGCTCATTGGAAAACTGGAGGGGGTTATGTCAAACCAGAAGAAG
TTCAGCTACTTTACTTGGTGCGTCAAATCATCATTTGCGAAGGCGAGAAA
GAAAGGTTTCACGACAAGCATCCGAACCTGAATCGCCACAATGAAAGTGA
GCTCCAAGGGGAGTCAGTGGACATATCAAAGCGTCTTTTGCGCTACAAAT
CTCTGTTCCATATCCAAACGGGGAGCTGGTTTACTGTCTATGACAACGAC
TACCAGGTGGCGGCGGATCCTCATTTTCCGGAGTCCAGAGCCAACCCGTT
TCATGTGCAATGTTTTTTCGATGGCACCATCCGTGAGGAAGATCTCCAAA
GGAATTCAATACGCGAGCGCATTCAAGAAGCTGAGAACAAGCGTCGTCCG
CTTTTTTCTGGACTTCGCAGCGTTACTTGGGGGTCAAAATTCACTAGCAG
TCGGAGTATGGACGGCGACGACTCTGTCTTCTCGCTGCAAGGATTTTGGT
CACAAATGacgtcctctttctttttcttggggCAAATGTTCATAccgtct
tcttttttccggtCCATCAAGAAATTGGAGGTAGATCTTTCTCGTACCGA
AGGGAAGTCGTCAGATTTACAAGTTTGAAATGAACATGGTGACAACACAG
CGTCGCAGGGCATGTTAATGAGAAAATTTTTCATTGTTGTGGATACGTGA
CATTCGCAGGTCTCAGGATTCCTGTCAGGAAACATCAAAACGACCAGAGA
ACACGAAAACCTGATAGCATCGGTTCCGCTTGAAGTATTTTGCACTGTAC
TTTTATTTTTGCATGTAAATGCTTGACAGATTCCATGATTGCTCATTCCG
AAAGCACGACGTAAGAGAGCGATGTCCCTTCTTCCGGAACATCTTGTTGA
ACCTTGTCTTTCAGCTCGTTTAGCAATGTCGACAAACCGACATTCTCAAT
CA back to topCoding sequence (CDS) from alignment at CM002469.1:363716..365367+ >rna6731 ID=rna6731|Name=rna6731|organism=Nannochloropsis gaditana|type=CDS|length=1140bp|location=Sequence derived from alignment at CM002469.1:363716..365367+ (Nannochloropsis gaditana)
ATGAATAAACGGGTGGAGGCACTCGCTCATGCTTTTAAACCTTCTTTGGT
TGATGTTCATGAAGAACTTTTGAGTAAGACTGATCACATCCTCGAAGTTG
CGAAGTCCCGAGGGTGGGGAATTTTCGGTAGCCAAGGCACGGAAAAGGAT
CTTTGCTTGTATGAGGCCGCTCAATACGAAGCTCAAGCCAAAGAGCTTCG
AGCTGCTATCGCATTGCTTTCCTCTACGAGCAATAACGACTCCATGGCGG
GAGCAAAGAGCAAAAAACTGATTCCTACATCAGAAACGGTGCTTGAAAAC
GGAGACCTAAAGTTGACAGCGACCGAGCAACGTCAAGAAGAGGTAGACAC
TCCCATCACAAATGTCACAGCTCAATCTTCTACAAATATCATTTTGAAAC
AAATCAAAAGATTTTTGTTTAAACGCATCATAGATGGCGATTTAGAAGAT
GCTCATCGGACCGCTGAGAGAATTGAGGTTCTCGCTAAATGCTTGAAGAC
ACAGTCGGAGTTGGATTTGGCTCATTGGAAAACTGGAGGGGGTTATGTCA
AACCAGAAGAAGTTCAGCTACTTTACTTGGTGCGTCAAATCATCATTTGC
GAAGGCGAGAAAGAAAGGTTTCACGACAAGCATCCGAACCTGAATCGCCA
CAATGAAAGTGAGCTCCAAGGGGAGTCAGTGGACATATCAAAGCGTCTTT
TGCGCTACAAATCTCTGTTCCATATCCAAACGGGGAGCTGGTTTACTGTC
TATGACAACGACTACCAGGTGGCGGCGGATCCTCATTTTCCGGAGTCCAG
AGCCAACCCGTTTCATGTGCAATGTTTTTTCGATGGCACCATCCGTGAGG
AAGATCTCCAAAGGAATTCAATACGCGAGCGCATTCAAGAAGCTGAGAAC
AAGCGTCGTCCGCTTTTTTCTGGACTTCGCAGCGTTACTTGGGGGTCAAA
ATTCACTAGCAGTCGGAGTATGGACGGCGACGACTCTGTCTTCTCGCTGC
AAGGATTTTGGTCACAAATGacgtcctctttctttttcttggggCAAATG
TTCATAccgtcttcttttttccggtCCATCAAGAAATTGGAGGTAGATCT
TTCTCGTACCGAAGGGAAGTCGTCAGATTTACAAGTTTGA back to top
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