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Properties
| Property Name | Value |
|---|
| Product | phosphopantothenate--cysteine ligase |
| Orig transcript id | gnl|cribi|Naga_100027g32.123.mrna |
| Orig protein id | gnl|cribi|Naga_100027g32.123 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:353368..355171 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6725 ID=rna6725|Name=rna6725|organism=Nannochloropsis gaditana|type=mRNA|length=411bp
ATGTCCACTCTCGAAGTCACGGACTTGCCAGTGCCTGCTAAGGATGAGCG
CTTCCCCTCCGTCAATCAGGCTCTAAACTGCTGGAACAAATACAACGAGT
GGGTTCTATGCCTGAAAAAAAATGAGAAAGATGAGAGCAAATGCTTTTTG
CCGCGCTTTAATATGCGTGAATTGTGCCCAACGGAATGGGTTGAGAAGTG
GGATGCCGACCGGGGCGAAGGCAAATTTGCGGGCCTTCAAGAGGACGACG
CCGTGGAGAAAGTGTGGATACGAGTTGGGGTAGAGTGTGCAGGGATAGGA
GCGGAGGGGGATGACAAGAGTAGGAAAATCTCGAGTCTGAAGGCCACGAT
CAGCGCACGCAGCTTAAATGACGACCCCGCCGTAGCTGTACTTAAGTGGA
TATTGGTTTGA back to topprotein sequence of rna6725 >rna6725-protein ID=rna6725-protein|Name=rna6725|organism=Nannochloropsis gaditana|type=polypeptide|length=420bp
MTAAAGQQSDAFFEPSNVTHNTTPIVLEATNRIREFAAGYLEQNRAIVLV
TSGGTAAPLERNTVRSIENFSTGKRGAASAEYFLRLGYAVIFLHRPGTSC
PFSRTFQTEVAEHVDGALMDALRVREKTGALVLNAKGGAAASLCAALEAY
QEAREEGTLLQVSYETVTDYLLILQSAARCLAPFRQNALFFLACAVSDFY
VPASEMADHKIQSTGKHRQRKQADVKGKAEEWDGLTLNLRAVPKCLSLLR
REWAPHAFVVSFKLETDTDVLLEKAQGAVARYGVHMVVANLLHTRYREVQ
LVKASPRARQGRESAEATEPSTPISTCFEVRKVVRDPAQPDLEATFVPLV
AQAHYTFISESDQPYGLPPPPLRSLPVPSLWQRLRRVDLADLFMGMILGP
GVVLLSVALQRRLLERLRNR back to topmRNA from alignment at CM002469.1:353368..355171+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6725 ID=rna6725|Name=rna6725|organism=Nannochloropsis gaditana|type=mRNA|length=1804bp|location=Sequence derived from alignment at CM002469.1:353368..355171+ (Nannochloropsis gaditana)
CAGTCTTCCATGTGGCATGTAGGGAGTCCCCAATCTGGCTAAccctcttt
ccgtcctcGATCGCTCATCACCCAGCAGACAAAGCAGCAAAAAAAGGTTT
CCGAGAAAGCGTAGAACAACCTTCATGCATGCGTTGGCTTGttatttttc
ctttcttcctcattttGCCCGCAGCAACTATCGTTCTAGACATGGACAAC
CCGCGCCTATCAGACGCAACTCTATGCATGGCCTCACCTGCCCAGTGTTC
AACCTTTTCTCCCGGCCCTCGAAGATAACCAGACAGGTCGAGGTTTTTGG
TGCAACATCGCGTTGTATCACTTTCTGGACGAAACACCTGAAGTTGACGG
CGCGATGACAGCAGCGGCTGGCCAGCAATCAGATGCTTTTTTCGAACCAA
GCAACGTGACACACAATACAACGCCAATCGTCTTAGAGGCCACCAATCGC
ATCCGCGAATTTGCGGCCGGCTATTTGGAGCAAAATCGTGCCATCGTATT
GGTCACCTCCGGAGGCACCGCTGCGCCTTTGGAGCGCAATACTGTGCGAT
CCATAGAAAATTTCAGCACAGGCAAGCGCGGGGCGGCTTCGGCGGAATAC
TTCCTGCGACTGGGCTATGCAGTCATTTTTTTGCATCGTCCAGGGACATC
TTGTCCTTTCTCCAGGACGTTCCAGACGGAGGTCGCGGAGCACGTAGACG
GAGCTCTGATGGATGCCTTGCGCGTGAGAGAGAAAACCGGGGCCTTGGTT
CTGAACGCCAAAGGAGgagcggccgcctccttgtGCGCGGCGCTTGAGGC
GTATCAAGAGGCGCGAGAGGAGGGTACGCTGCTGCAGGTTTCTTACGAGA
CAGTGACAGACTATCTTCTCATCCTACAATCTGCCGCTCGctgccttgct
ccctttAGACAGAATGCCCTGTTCTTTTTGGCCTGTGCGGTGAGTGACTT
CTACGTTCCGGCTTCCGAGATGGCCGACCACAAGATCCAGTCCACCGGGA
AGCACCggcagaggaagcaagcagatgtgaaggggaaggctgAGGAGTGG
GATGGACTGACGCTGAACCTGCGCGCTGTGCCTAAGtgtctttctcttct
ccggCGAGAGTGGGCCCCGCACGCATTTGTCGTGTCCTTCAAGCTGGAAA
CGGACACAGACGTGCTCTTGGAAAAAGcgcagggggcggtggcgcggTAC
GGCGTGCATATGGTGGTGGCCAACCTTTTGCACACCCGCTACAGAGAGGT
GCAGCTTGTAAAGGCCTCGCCGCGGGCCCggcaggggagagaaagcgccG
AGGCCACAgagccctccaccccgaTTTCGACCTGCTTTGAAGTGCGGAAA
GTAGTGCGAGATCCAGCTCAACCAGATTTGGAGGCGACTTTCGTTCCTTT
AGTCGCCCAGGCCCACTACACCTTCATCTCTGAGAGCGACCAGCCTtacg
gccttcctcccccgcctcttcggTCACTACCCGTCCCGTCCCTGTGGCAA
CGCCTTCGTCGGGTTGACCTGGCAGATCTCTTCATGGGGATGATCCTCGG
GCCCGGAGTAGTGCTTCTGTCGGTGGCCCTACAACGCAGGCTATTGGAGA
GGCTCAGAAATAGGTAGATTCTTGCGTTCTGCACACGATGTATTCCATAT
GTACGGCGGTAAATACACCAAATCAATTATATTGGATGGTGTCAAGTTCT
ACGCCTGCGTCGTTTCTTTATATGTATAGTTTCATGTGGGCGTTGTGCTT
CGTTGCACCGGAAAAAAGAACTAAGAATGCTCAAGTCGCCGCAACCTTGC
CACA back to topCoding sequence (CDS) from alignment at CM002469.1:353368..355171+ >rna6725 ID=rna6725|Name=rna6725|organism=Nannochloropsis gaditana|type=CDS|length=1263bp|location=Sequence derived from alignment at CM002469.1:353368..355171+ (Nannochloropsis gaditana)
ATGACAGCAGCGGCTGGCCAGCAATCAGATGCTTTTTTCGAACCAAGCAA
CGTGACACACAATACAACGCCAATCGTCTTAGAGGCCACCAATCGCATCC
GCGAATTTGCGGCCGGCTATTTGGAGCAAAATCGTGCCATCGTATTGGTC
ACCTCCGGAGGCACCGCTGCGCCTTTGGAGCGCAATACTGTGCGATCCAT
AGAAAATTTCAGCACAGGCAAGCGCGGGGCGGCTTCGGCGGAATACTTCC
TGCGACTGGGCTATGCAGTCATTTTTTTGCATCGTCCAGGGACATCTTGT
CCTTTCTCCAGGACGTTCCAGACGGAGGTCGCGGAGCACGTAGACGGAGC
TCTGATGGATGCCTTGCGCGTGAGAGAGAAAACCGGGGCCTTGGTTCTGA
ACGCCAAAGGAGgagcggccgcctccttgtGCGCGGCGCTTGAGGCGTAT
CAAGAGGCGCGAGAGGAGGGTACGCTGCTGCAGGTTTCTTACGAGACAGT
GACAGACTATCTTCTCATCCTACAATCTGCCGCTCGctgccttgctccct
ttAGACAGAATGCCCTGTTCTTTTTGGCCTGTGCGGTGAGTGACTTCTAC
GTTCCGGCTTCCGAGATGGCCGACCACAAGATCCAGTCCACCGGGAAGCA
CCggcagaggaagcaagcagatgtgaaggggaaggctgAGGAGTGGGATG
GACTGACGCTGAACCTGCGCGCTGTGCCTAAGtgtctttctcttctccgg
CGAGAGTGGGCCCCGCACGCATTTGTCGTGTCCTTCAAGCTGGAAACGGA
CACAGACGTGCTCTTGGAAAAAGcgcagggggcggtggcgcggTACGGCG
TGCATATGGTGGTGGCCAACCTTTTGCACACCCGCTACAGAGAGGTGCAG
CTTGTAAAGGCCTCGCCGCGGGCCCggcaggggagagaaagcgccGAGGC
CACAgagccctccaccccgaTTTCGACCTGCTTTGAAGTGCGGAAAGTAG
TGCGAGATCCAGCTCAACCAGATTTGGAGGCGACTTTCGTTCCTTTAGTC
GCCCAGGCCCACTACACCTTCATCTCTGAGAGCGACCAGCCTtacggcct
tcctcccccgcctcttcggTCACTACCCGTCCCGTCCCTGTGGCAACGCC
TTCGTCGGGTTGACCTGGCAGATCTCTTCATGGGGATGATCCTCGGGCCC
GGAGTAGTGCTTCTGTCGGTGGCCCTACAACGCAGGCTATTGGAGAGGCT
CAGAAATAGGTAG back to top
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