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Properties
Property Name | Value |
Product | stearoyl- desaturase 5 |
Orig transcript id | gnl|cribi|Naga_100027g27.153.mrna |
Orig protein id | gnl|cribi|Naga_100027g27.153 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002469.1 | supercontig | CM002469.1:341620..343704 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6721 ID=rna6721|Name=rna6721|organism=Nannochloropsis gaditana|type=mRNA|length=1275bp GCCACCGCCTCTGCACGGATATCTGGCTACTTACCAAGTTCATTGATCTG TTCTTTGAGCAGCAATCCCTCCTTCGAACGTCGTCCGCCTCTCTCAGCGT TTTTGCTACCCTTTGAATGTGCTCTACTCCGTTCTCGCCCAACGCACACA CGTTTATTCCCTTCAAACGCCCTGAAGTGGAATTGCCTCTCAACAAAACC GTGGTGCTTTCGGGCATCATACTGTGTGAAATGAGCAAATGAGAAACATA GAACACAAACGAGAAGCAAAGAATCGATGCAGGGTTCACATGATTCGCTA TAAGTCTTCTTCTGTTTCTCTAATGTCTGTCCGTCATCATGGGGCTTCTT TGCGTCCAATCTACGCATCAAGGCTCGTTTCGAGTTTTAGTAACTTAACG TTTGCCGCGAAACAGAGTCCCTTGTCATAGGACTACAGGGCTTCTGATCT CCTCAACTTAAATGAAGTGATTCAATTAGTCGAAGGTTTGCAAAATTCAT CACGTTGATGGATAAATGGCGTGAGCACCGCTGGGAGCTTGTACATAGCA AATTAATGCTGAAGGTCGAAATATAATACATTGCTAAGCGATCATGTCTA TCTAAATGTCTATCTAAATGTAGCCATTTCTTTGTAATTCATAGTGGTGG TCCTATGCCTTTTCTCGAACGCACTTTTCGCAGGATATATGAAGGCAGTG AAGAACAAGAGTGGTCTTTCAATGGATTAAATCTGAGGTCATGGCGTCGC CCAAAAGAAAATCTATAATTATGATGGCTTACTCCGATTGTGTATGGAAA AAGTATGCGGATGGAGGGCAAATTATCCTGAGGCAGAGGGTTACCGGGGG TAGCACGGCTGCACGGTCACTCAATAGTCCACTCTTCGAAGTATACCACA CAAGGCTTGCTCACTATCGAAGGAAGAGTCGGCTTACTCGCAGACCATTT AACGAAGAGCGATGCTATTTTCAGTGTGCATTTGCGAATGAGAAAATCTT TTATTTTATATTTGACCTTCGAGCGGTAAAGCACCCTCATTCCAGACTGT GCCTTAGGGCTGCCGTGCCATCACATTTAAACTTTCACAGGGGTCAATAC AAGCAGTTTTCTTTACCTGGGGGCCGAAACAAGATTCAGAAATTAGAATA TAACATAAAATATTAATGAGGAATCCGACACACATGACCTCCCAACTACA AAGTGTACTGTAGATATGCCAATTCTGTGCATTCTGTGCTAAAAAAGAAG ACACGCGGATAGACTTGTTGTCCTC back to topprotein sequence of rna6721 >rna6721-protein ID=rna6721-protein|Name=rna6721|organism=Nannochloropsis gaditana|type=polypeptide|length=340bp MVFQLARDALSALVYHYKEGNLNWPMIIYLVLAHLAAYMGLVSIPSCKWQ TLLEAFILWPITGLGITAGVHRLWAHRSYTATLPYRILLMLFNSIANQGS IYHWSRDHRVHHKYSETDADPHNATRGFFFAHMGWLIVKKHPKVVEGGKQ LDFSDLAADPVVRFQRDWDPWFAQFMCFVMPALVARYFWGEAFWNAFWVA GGLRYCLVLHFTWMVNSAAHLYGDHPYDPTIWPAENPLVSVVAIGEGWHN WHHRYPYDYAASEFGISRQFNPTKAFIDFFAAIGMVSNRKRATGAWAKLR ESRAKDEANGKSIKDFRGRGVVQGTAQPPGWEQSAHPKYN back to topmRNA from alignment at CM002469.1:341620..343704+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6721 ID=rna6721|Name=rna6721|organism=Nannochloropsis gaditana|type=mRNA|length=2085bp|location=Sequence derived from alignment at CM002469.1:341620..343704+ (Nannochloropsis gaditana) ACTCGCACACCAGTGTTCTCGCTTTATCGTTGTGCTAGGTTTTATCTCCT
CCGTTCGCGTTCGCGAGGCAGCCGCCGCGTGCCTCAAGCCGAGGCGGGTG
CTGTGGGGCATACGTGGTGGTTTTCGGTCACTGAAGGGCTCGTGAATCAG
TGAATTCATGGGAAACTCACTTTCACCTTGCCCAAAAGAGTGCTCTGGGT
GTTGGTGCTTCAGGCCTATCCGTGGACGTCTGAGCCAGGCCCAACACCTG
ACTACCCTACCCTCCACTACCCCTGCTCTCCCCTTTGAGCTGCCGGGTCC
CTATGAGATGATAGATTGGTCCATCCTACGTGTTAGCGCGCACTATTAGA
CTCTATGTATCTCTTCCGCTCGTGTTTGGGCGCTGAAACCCGCCTAGGAT
ATGACAAGCGAAATTCTGTGACGGAAGTCCTGACGTTCAGGAGACGCACG
CTCACGAGTCATGAATGTCAAGGTCAGCCTGCACGTAGATGTCCTCACCA
TCCCTTCACTCTCTCTCATACATAACCTCGCAGATCATCACCTGGGATCG
TCATCGACAGAAACCCTCCGAAGTAAAGCACTCAAAAAAAGATGGTCTTC
CAGTTGGCTCGCGATGCCTTGTCGGCGCTTGTCTACCACTACAAAGAGGG
CAACCTGAATTGGCCCATGATCATCTACCTAGTCCTCGCGCACCTTGCCG
CCTACATGGGGCTGGTCTCCATCCCTTCATGCAAGTGGCAGACCCTTCTG
GAGGCCTTCATCCTGTGGCCCATCACCGGGTTGGGCATCACGGCCGGCGT
CCATCGTCTGTGGGCGCATCGCTCCTACACTGCCACCTTGCCGTaccgca
tcctcctcatgcTCTTCAATTCGATTGCGAATCAAGGCAGCATCTACCAC
TGGTCCCGGGATCATCGCGTTCACCACAAGTACTCGGAGACAGATGCGGA
TCCTCACAATGCCACCCGTGGCTTCTTCTTCGCGCACATGGGGTGGCTTA
TCGTTAAGAAACACCCGAAGGTAGTAGAAGGCGGCAAACAGTTGGATTTC
TCTGATCTTGCTGCGGACCCGGTGGTCCGTTTCCAGCGTGACTGGGACCC
GTGGTTCGCGCAATTCATGTGCTTCGTCATGCCGGCGCTGGTCGCCAGAT
ATTTCTGGGGTGAGGCCTTTTGGAACGCATTTTGGGTTGCAGGGGGCCTC
CGCTACTGTCTGGTCCTGCATTTCACCTGGATGGTGAACTCCGCCGCCCA
CTTATACGGCGATCACCCCTACGACCCCACCATCTGGCCCGCCGAGAACC
CGCTAGTATCGGTGGTGGCcatcggggagggatggcacAATTGGCATCAC
CGGTATCCCTACGACTATGCGGCATCTGAGTTCGGGATCTCCCGACAATT
TAACCCTACGAAGGCTTTCATTGACTTCTTTGCTGCCATCGGTATGGTCT
CGAATCGAAAGCGGGCGACAGGGGCCTGGGCCAAGCTCAGGGAGTCACGG
GCGAAGGACGAGGCGAACGGGAAGAGCATCAAAGATtttcgaggacgagg
agttGTCCAAGGCACCGCACAGCCACCGGGATGGGAACAAAGCGCGCACC
CCAAGTACAACTGATCGAAAAAAGTCTTGTACTCGATGAAGGACTGGAGG
GCGTAGGGAAACGATGTTGAGAGGTGACCGATTCGGTGACAGCAATGTGC
TTTTTTCTGCCTTTGTTCCATAGGTCGTTAATTACGACACAGGTGGTAAC
TGGGGATAAGATGCATTTAATTCTACGGTCAAAAAATGTGAGAGTTTGAA
GACCCGACTTAGGGTGAAACTTTATTGCGTAGGTGTCGCGGGTGAGCTAC
CCTTGCATGTGCATGCCAGTCTGAAACACACGAGTCTTCGCCCGCCACGG
CTCCTCGTCCCGTACAATTTCCCTCAATTAGAAATAGCCGCATCGATACG
ATCGCAACGTGTATAGGTGTTAAGGGATCAGACGTGCGTAAAATAAGAAA
CCCAGCAATTACTATTTATAACTACTTATCGCACAGCTCCCAGCCAGTTC
GCTGGAAATGAACGTTATATCGAGTTGATATAAAT back to topCoding sequence (CDS) from alignment at CM002469.1:341620..343704+ >rna6721 ID=rna6721|Name=rna6721|organism=Nannochloropsis gaditana|type=CDS|length=1023bp|location=Sequence derived from alignment at CM002469.1:341620..343704+ (Nannochloropsis gaditana) ATGGTCTTCCAGTTGGCTCGCGATGCCTTGTCGGCGCTTGTCTACCACTA CAAAGAGGGCAACCTGAATTGGCCCATGATCATCTACCTAGTCCTCGCGC ACCTTGCCGCCTACATGGGGCTGGTCTCCATCCCTTCATGCAAGTGGCAG ACCCTTCTGGAGGCCTTCATCCTGTGGCCCATCACCGGGTTGGGCATCAC GGCCGGCGTCCATCGTCTGTGGGCGCATCGCTCCTACACTGCCACCTTGC CGTaccgcatcctcctcatgcTCTTCAATTCGATTGCGAATCAAGGCAGC ATCTACCACTGGTCCCGGGATCATCGCGTTCACCACAAGTACTCGGAGAC AGATGCGGATCCTCACAATGCCACCCGTGGCTTCTTCTTCGCGCACATGG GGTGGCTTATCGTTAAGAAACACCCGAAGGTAGTAGAAGGCGGCAAACAG TTGGATTTCTCTGATCTTGCTGCGGACCCGGTGGTCCGTTTCCAGCGTGA CTGGGACCCGTGGTTCGCGCAATTCATGTGCTTCGTCATGCCGGCGCTGG TCGCCAGATATTTCTGGGGTGAGGCCTTTTGGAACGCATTTTGGGTTGCA GGGGGCCTCCGCTACTGTCTGGTCCTGCATTTCACCTGGATGGTGAACTC CGCCGCCCACTTATACGGCGATCACCCCTACGACCCCACCATCTGGCCCG CCGAGAACCCGCTAGTATCGGTGGTGGCcatcggggagggatggcacAAT TGGCATCACCGGTATCCCTACGACTATGCGGCATCTGAGTTCGGGATCTC CCGACAATTTAACCCTACGAAGGCTTTCATTGACTTCTTTGCTGCCATCG GTATGGTCTCGAATCGAAAGCGGGCGACAGGGGCCTGGGCCAAGCTCAGG GAGTCACGGGCGAAGGACGAGGCGAACGGGAAGAGCATCAAAGATtttcg aggacgaggagttGTCCAAGGCACCGCACAGCCACCGGGATGGGAACAAA GCGCGCACCCCAAGTACAACTGA back to top
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