rna6714, rna6714 (mRNA) Nannochloropsis gaditana

Overview
Namerna6714
Unique Namerna6714
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length660
Alignment locationCM002469.1:325183..326409 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100027g21.144.mrna
Orig protein idgnl|cribi|Naga_100027g21.144
GbkeymRNA
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:325183..326409 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100027g21gene6492Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6714rna6714-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23966.1cds6698Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6714 ID=rna6714|Name=rna6714|organism=Nannochloropsis gaditana|type=mRNA|length=660bp
ATGCGCACCACCGCTTGCTTGCTCGCCGGTCTGGGCCTCACCCAGGCTTT
TCTGGCCCCCACCCTCCCCAGCGCCCGCTCGTTCAGCCGCACCGCCGTGA
CCATGAAGTTGGGCTCCTCTGCACAGGGCCTAGCCGGAAGCGACATCGAG
TTCCCCGAGTTCGACCCCCTGGGATTCACCAACAACCCAAAGCCCGAGAC
ATTGGACTGGTACCGTGCCGCTGAGCTCAAGCACGGGCGCGTTGCCATGT
TGGCGGCCCTGGGTCAGATCGTGCAGCACTTCTACACCCTCCCCGACGCG
TCCGGCGTCTTCTCCGCGGGAGACCGGCCCATCGAGGCCCTGAACAAGGT
GGTGGCAGAGCGGCCCTTGGCAGCCATTCAGATCGGCCTGGCCATCTTTG
CGGTGGAGGCGCTGGGGCAGTTCAACCAGGCCAAGCCCGGGCAGGCCCCC
GGGGATCTGGGCTGGGACCCTCTGAACTTGAAGAGCGACGACCCCGAGAT
CTACGCTAAGGTCCAGAACCGCGAGCTCAAGAACGGGCGCCTTGCTATGA
TCGCCATCGCCGGCATGTTGGTGCAGGAGAACTTGACGGGCCTCGGCGTC
ATCGAGCAGTGGGTCAAGGGCGACATCAACCCATTCGGGGACGGACGTGG
CTTCTTCTAG
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protein sequence of rna6714

>rna6714-protein ID=rna6714-protein|Name=rna6714|organism=Nannochloropsis gaditana|type=polypeptide|length=168bp
MEGLGCGRPEAVSTSASVRERRTLNQARPHPYFQAPHSPHSKRFIVGNQL
QRVPILHLCTAISEWARRVPSPRLTSYFFSLSFKQSDAIPFSATMATTEP
KVAAKDDAAPLLDVLEEDDEFEEFADPDWDAVVDEAQDEQQWQDDWDDDK
ADDEFSKHLRQELEKHGG
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mRNA from alignment at CM002469.1:325183..326409-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6714 ID=rna6714|Name=rna6714|organism=Nannochloropsis gaditana|type=mRNA|length=1227bp|location=Sequence derived from alignment at CM002469.1:325183..326409- (Nannochloropsis gaditana)
GTGCCGAGGAGGGGAAAACCTGGAGAAAATTTTGATGTCGGTGGGATGGA
TGAGAGAGAGAGGGCTGATTATTCACTGAGGAGGAAGAGGTCATTTTTGG
GAAGTAGTACTCCAGGAGACCCAAAAACGCATGGACGCTTCGGCCTGCCT
GGTTTCCCGTTCCAACCCTCAGAATTGAGTCAAACTTCCCGTTGCATGCG
CCGCAGTGTGGCATGATTGTAAATGGAAGGACTTGGCTGTGGACGGCCTG
AGGCTGTCTCCACGTCGGCTTCAGTCAGGGAGCGACGAACTCTAAACCAG
GCCCGGCCACACCCCTACTTCCAAGCACCGCATTCCCCGCACTCAAAACG
ATTCATCGTCGGCAATCAATTGCAACGTGTTCCTATACTTCACTTGTGTA
CGGCCATATCAGAGTGGGCTCGTCGAGTGCCATCTCCCAGACTGACTTCG
TACTTCTTTTCCCTCTCCTTCAAACAAAGCGACGCGATTCCCTTTTCCGC
AACTATGGCAACCACTGAGCCTAAGGTTGCTGCCAAGGATGACGCGGCTC
CATTGCTGGATGTTCTTGAGGAAGACGACGAATTTGAGGTACGGGAGGGA
CGGAATGGGTGAAGGGGTGCCTCAAGAGGGCCTCCACTACGGGTTGATCC
CCGCGGGCGGCCCGAACACTTTCTCCCTCCTCTTGATTGATTTGAGATTT
GTCTTGTGGACAGGAATTTGCGGATCCAGATTGGGACGCGGTTGTTGACG
AGGCGCAAGACGAGCAGCAGTGGCAGGTAAGCTTATTCCGATTCAGCCTT
CGGCAAGGTGCACGTGTGACGGTGCCTGCGCTATCCGAATCAGATACCTT
GTCGAGTCAATGAAAGTCTAGCGTTCTGAGACGAATGCAAGCGTGGGCTT
CGACGTTCTCACTCCGGGGATGTCGAGGGCATCGATGGCCCTTTTGATCC
AGGCATGTTCTTCACGCCGTCTCTCCCACATCGATTGAACGCATGCGCGG
GACAGGACGATTGGGATGACGATAAAGCGGACGACGAGTTCTCCAAGCAT
CTGCGTCAAGAACTCGAGAAACATGGAGGCTGATTCGGGAGTTGGCTTGG
CGTTGCGGGGAGCCCGTACCAGGGACCACAGGAGCTCGCGGGCGATGTCT
GCCCGCATGGCTGCAGTTGACTTAAGCTTGTTCCATACAAAGAAAAAATA
AGCAAAAATGACATATGAGTCTCGACT
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Coding sequence (CDS) from alignment at CM002469.1:325183..326409-

>rna6714 ID=rna6714|Name=rna6714|organism=Nannochloropsis gaditana|type=CDS|length=1521bp|location=Sequence derived from alignment at CM002469.1:325183..326409- (Nannochloropsis gaditana)
GACGATTGGGATGACGATAAAGCGGACGACGAGTTCTCCAAGCATCTGCG
TCAAGAACTCGAGAAACATGGAGGCTGAGAATTTGCGGATCCAGATTGGG
ACGCGGTTGTTGACGAGGCGCAAGACGAGCAGCAGTGGCAGATGGAAGGA
CTTGGCTGTGGACGGCCTGAGGCTGTCTCCACGTCGGCTTCAGTCAGGGA
GCGACGAACTCTAAACCAGGCCCGGCCACACCCCTACTTCCAAGCACCGC
ATTCCCCGCACTCAAAACGATTCATCGTCGGCAATCAATTGCAACGTGTT
CCTATACTTCACTTGTGTACGGCCATATCAGAGTGGGCTCGTCGAGTGCC
ATCTCCCAGACTGACTTCGTACTTCTTTTCCCTCTCCTTCAAACAAAGCG
ACGCGATTCCCTTTTCCGCAACTATGGCAACCACTGAGCCTAAGGTTGCT
GCCAAGGATGACGCGGCTCCATTGCTGGATGTTCTTGAGGAAGACGACGA
ATTTGAGGACGATTGGGATGACGATAAAGCGGACGACGAGTTCTCCAAGC
ATCTGCGTCAAGAACTCGAGAAACATGGAGGCTGAGAATTTGCGGATCCA
GATTGGGACGCGGTTGTTGACGAGGCGCAAGACGAGCAGCAGTGGCAGAT
GGAAGGACTTGGCTGTGGACGGCCTGAGGCTGTCTCCACGTCGGCTTCAG
TCAGGGAGCGACGAACTCTAAACCAGGCCCGGCCACACCCCTACTTCCAA
GCACCGCATTCCCCGCACTCAAAACGATTCATCGTCGGCAATCAATTGCA
ACGTGTTCCTATACTTCACTTGTGTACGGCCATATCAGAGTGGGCTCGTC
GAGTGCCATCTCCCAGACTGACTTCGTACTTCTTTTCCCTCTCCTTCAAA
CAAAGCGACGCGATTCCCTTTTCCGCAACTATGGCAACCACTGAGCCTAA
GGTTGCTGCCAAGGATGACGCGGCTCCATTGCTGGATGTTCTTGAGGAAG
ACGACGAATTTGAGGACGATTGGGATGACGATAAAGCGGACGACGAGTTC
TCCAAGCATCTGCGTCAAGAACTCGAGAAACATGGAGGCTGAGAATTTGC
GGATCCAGATTGGGACGCGGTTGTTGACGAGGCGCAAGACGAGCAGCAGT
GGCAGATGGAAGGACTTGGCTGTGGACGGCCTGAGGCTGTCTCCACGTCG
GCTTCAGTCAGGGAGCGACGAACTCTAAACCAGGCCCGGCCACACCCCTA
CTTCCAAGCACCGCATTCCCCGCACTCAAAACGATTCATCGTCGGCAATC
AATTGCAACGTGTTCCTATACTTCACTTGTGTACGGCCATATCAGAGTGG
GCTCGTCGAGTGCCATCTCCCAGACTGACTTCGTACTTCTTTTCCCTCTC
CTTCAAACAAAGCGACGCGATTCCCTTTTCCGCAACTATGGCAACCACTG
AGCCTAAGGTTGCTGCCAAGGATGACGCGGCTCCATTGCTGGATGTTCTT
GAGGAAGACGACGAATTTGAG
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Synonyms
Publications