rna6703, rna6703 (mRNA) Nannochloropsis gaditana

Overview
Namerna6703
Unique Namerna6703
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length555
Alignment locationCM002469.1:301775..302579 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100027g9.129.mrna
Orig protein idgnl|cribi|Naga_100027g9.129
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:301775..302579 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100027g9gene6481Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6703rna6703-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23951.1cds6687Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6703 ID=rna6703|Name=rna6703|organism=Nannochloropsis gaditana|type=mRNA|length=555bp
ATGGGAGATGAACCTATGAAGCTGCAGCTCCTCTCGAACAGCAACGGAGT
GCTGGCAACTGAGCTTGTAGGCGTGGACGACGACTACCAAACTTTCTCCT
ACGCGTATAAATTCACAACTAATCAAGGAGGATTCCTATGCCGACGATAT
GATGTCTTTGATGCGGTTGGTTTACGTTGTTGTGACGTTCGGTGGGCACT
GGGCAAGTTAAGGATAGTGATGCTCCCAGATGGCTATGTTACCGAGAAAT
GTAAGCCCTCCACGGAATGGCTTGGTAAGCACGACATCTCCGAGTGGGCC
CCGGCGTCTCGTGATTTTCAGAAGCAATGGCAGCAAATGGTGAAGGACGA
GCTCCTGTCTTGCCGCAAGGATTTGCTCGCCAACACCCTCCATCACTTCC
GCGATCTCTGTAAGGATAATCCGGACACTAAAGAAGCCCTGAGGGATCTC
GTTCTAGTCGACGACGAGGACGTGGACTCCGTGGTGAACAACTTCGCGGG
CGAATTCAAGCGAACGAAACTGACCGAGAAGATTTGGAAGAGCGTCAAGC
TTTGA
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protein sequence of rna6703

>rna6703-protein ID=rna6703-protein|Name=rna6703|organism=Nannochloropsis gaditana|type=polypeptide|length=237bp
MRGMDIEYHISLLESRKYLKFGKVVCWFWPSRKARGIGAERIAGSAHSRT
YDGSPQACKRKSFAGVGFVDRGDIIERESAQAGGSLMKGRNKGSRRRQNV
KKQDKMQADTTPFSRMEEERLRRRGKVRAEPLRIDACFDSRYSYSPHLFF
GASRFHAEDKQMPDILCREEGVAVRVMSTSANDQTRVSRTAKTQKNVTKR
DHNQKSIDHAVEVLAESAIEIEVRNEMIQASEAESLG
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mRNA from alignment at CM002469.1:301775..302579-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6703 ID=rna6703|Name=rna6703|organism=Nannochloropsis gaditana|type=mRNA|length=805bp|location=Sequence derived from alignment at CM002469.1:301775..302579- (Nannochloropsis gaditana)
ATGCGTGGCATGGACATAGAGTATCACATTTCCTTGTTGGAGTCTCGAAA
ATATCTGAAGTTTGGAAAAGTCGTTTGCTGGTTTTGGCCGAGCAGGAAGG
CGCGAGGGATCGGAGCCGAGAGGATTGCTGGTAGCGCCCATTCTCGCACC
TATGACGGCTCGCCTCAGGCTTGCAAACGAAAGTCTTTTGCGGGGGTGGG
GTTCGTAGGTCTTGAGAAAGGTGCTTATATATAAAAAAACATCTCCTAGA
CAGAGGTGACATTATCGAGAGAGAAAGTGCGCAAGCTGGAGGAAGCTTAA
TGAAAGGCAGAAACAAAGGGAGTAGGCGACGTCAAAATGTGAAGAAGCAG
GATAAGATGCAGGCAGATACAACGCCATTCAGCCGGATGGAAGAGGAGAG
GCTGAGGAGGAGGGGGAAAGTGCGAGCTGAGCCTCTGCGGAGTGAGTTGG
CTCGGCAATCTTTTCTCAGCTGGAAATTTTATCCGCCTAAGTTGACGCAT
GCTTCGATTCAAGATATAGCTACTCTCCGCATTTATTTTTCGGTGCGTCC
CGTTTTCATGCCGAAGACAAGCAGATGCCCGATATCTTGTGCAGAGAGGA
AGGAGTTGCCGTGCGCGTGATGAGCACATCGGCAAATGATCAGACACGTG
TGAGTAGAACTGCGAAGACACAGAAAAATGTCACGAAGAGAGACCACAAT
CAAAAATCTATCGACCATGCCGTTGAGGTACTAGCAGAGAGTGCGATCGA
AATCGAGGTGAGAAATGAGATGATACAAGCAAGTGAGGCGGAGAGCCTGG
GCTAG
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Coding sequence (CDS) from alignment at CM002469.1:301775..302579-

>rna6703 ID=rna6703|Name=rna6703|organism=Nannochloropsis gaditana|type=CDS|length=2142bp|location=Sequence derived from alignment at CM002469.1:301775..302579- (Nannochloropsis gaditana)
TTGACGCATGCTTCGATTCAAGATATAGCTACTCTCCGCATTTATTTTTC
GGTGCGTCCCGTTTTCATGCCGAAGACAAGCAGATGCCCGATATCTTGTG
CAGAGAGGAAGGAGTTGCCGTGCGCGTGATGAGCACATCGGCAAATGATC
AGACACGTGTGAGTAGAACTGCGAAGACACAGAAAAATGTCACGAAGAGA
GACCACAATCAAAAATCTATCGACCATGCCGTTGAGGTACTAGCAGAGAG
TGCGATCGAAATCGAGGTGAGAAATGAGATGATACAAGCAAGTGAGGCGG
AGAGCCTGGGCTAGACAGAGGTGACATTATCGAGAGAGAAAGTGCGCAAG
CTGGAGGAAGCTTAATGAAAGGCAGAAACAAAGGGAGTAGGCGACGTCAA
AATGTGAAGAAGCAGGATAAGATGCAGGCAGATACAACGCCATTCAGCCG
GATGGAAGAGGAGAGGCTGAGGAGGAGGGGGAAAGTGCGAGCTGAGCCTC
TGCGGAATGCGTGGCATGGACATAGAGTATCACATTTCCTTGTTGGAGTC
TCGAAAATATCTGAAGTTTGGAAAAGTCGTTTGCTGGTTTTGGCCGAGCA
GGAAGGCGCGAGGGATCGGAGCCGAGAGGATTGCTGGTAGCGCCCATTCT
CGCACCTATGACGGCTCGCCTCAGGCTTGCAAACGAAAGTCTTTTGCGGG
GGTGGGGTTCGTAGTTGACGCATGCTTCGATTCAAGATATAGCTACTCTC
CGCATTTATTTTTCGGTGCGTCCCGTTTTCATGCCGAAGACAAGCAGATG
CCCGATATCTTGTGCAGAGAGGAAGGAGTTGCCGTGCGCGTGATGAGCAC
ATCGGCAAATGATCAGACACGTGTGAGTAGAACTGCGAAGACACAGAAAA
ATGTCACGAAGAGAGACCACAATCAAAAATCTATCGACCATGCCGTTGAG
GTACTAGCAGAGAGTGCGATCGAAATCGAGGTGAGAAATGAGATGATACA
AGCAAGTGAGGCGGAGAGCCTGGGCTAGACAGAGGTGACATTATCGAGAG
AGAAAGTGCGCAAGCTGGAGGAAGCTTAATGAAAGGCAGAAACAAAGGGA
GTAGGCGACGTCAAAATGTGAAGAAGCAGGATAAGATGCAGGCAGATACA
ACGCCATTCAGCCGGATGGAAGAGGAGAGGCTGAGGAGGAGGGGGAAAGT
GCGAGCTGAGCCTCTGCGGAATGCGTGGCATGGACATAGAGTATCACATT
TCCTTGTTGGAGTCTCGAAAATATCTGAAGTTTGGAAAAGTCGTTTGCTG
GTTTTGGCCGAGCAGGAAGGCGCGAGGGATCGGAGCCGAGAGGATTGCTG
GTAGCGCCCATTCTCGCACCTATGACGGCTCGCCTCAGGCTTGCAAACGA
AAGTCTTTTGCGGGGGTGGGGTTCGTAGTTGACGCATGCTTCGATTCAAG
ATATAGCTACTCTCCGCATTTATTTTTCGGTGCGTCCCGTTTTCATGCCG
AAGACAAGCAGATGCCCGATATCTTGTGCAGAGAGGAAGGAGTTGCCGTG
CGCGTGATGAGCACATCGGCAAATGATCAGACACGTGTGAGTAGAACTGC
GAAGACACAGAAAAATGTCACGAAGAGAGACCACAATCAAAAATCTATCG
ACCATGCCGTTGAGGTACTAGCAGAGAGTGCGATCGAAATCGAGGTGAGA
AATGAGATGATACAAGCAAGTGAGGCGGAGAGCCTGGGCTAGACAGAGGT
GACATTATCGAGAGAGAAAGTGCGCAAGCTGGAGGAAGCTTAATGAAAGG
CAGAAACAAAGGGAGTAGGCGACGTCAAAATGTGAAGAAGCAGGATAAGA
TGCAGGCAGATACAACGCCATTCAGCCGGATGGAAGAGGAGAGGCTGAGG
AGGAGGGGGAAAGTGCGAGCTGAGCCTCTGCGGAATGCGTGGCATGGACA
TAGAGTATCACATTTCCTTGTTGGAGTCTCGAAAATATCTGAAGTTTGGA
AAAGTCGTTTGCTGGTTTTGGCCGAGCAGGAAGGCGCGAGGGATCGGAGC
CGAGAGGATTGCTGGTAGCGCCCATTCTCGCACCTATGACGGCTCGCCTC
AGGCTTGCAAACGAAAGTCTTTTGCGGGGGTGGGGTTCGTAG
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Synonyms
Publications