rna6663, rna6663 (mRNA) Nannochloropsis gaditana

Overview
Namerna6663
Unique Namerna6663
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length309
Alignment locationCM002469.1:202050..203760 -

Link to JBrowse

Properties
Property NameValue
Productnicotinamide n-methyltransferase
Orig transcript idgnl|cribi|Naga_100040g11.2006.mrna
Orig protein idgnl|cribi|Naga_100040g11.2006
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:202050..203760 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100040g11gene6441Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24008.1cds6647Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6663rna6663-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6663 ID=rna6663|Name=rna6663|organism=Nannochloropsis gaditana|type=mRNA|length=309bp
ATGATTTTGATGCCGCCACCTTCAGAAAACGAGGGGGAGCCACTGACGCG
ATATAACGCCATGATGTCTCGAAGATGCAGCGCTCCGTTTCAATCTGACC
ACGGGGCATGGCAAAAAGCAATAAATAAAAATAATGCGCGAGCATGGACT
ACGTGCGGGCATGACACAGCGCGTGGCACTTGGGCGGTGTGCATGCTGGC
CTGTGGCTTCAAGTACTCTACTGCCGGTGTGACCTGGAAAGAGATAAGTA
TCTCGAGTGTACGAAATTCTTTGAAAAAAGAGTGGGGCCAACGTTTTAGA
ACTAGATGA
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protein sequence of rna6663

>rna6663-protein ID=rna6663-protein|Name=rna6663|organism=Nannochloropsis gaditana|type=polypeptide|length=309bp
MEGVQLCVPRHGVEDNEEEQDWELEQGLLSLFATSDKANPSSAENSGEED
SSPMLTTHTYTRRDPTALPLELEISLLSCRHSLWGHKLWNAAKVLGEMID
SRPSLVQGKYCLELGAGAALPSLLAALNGARRVVCSDYATSTDRVLVAAM
QTNIDRLVAQAFLPHDVLRAVGYVWGQPINSLLAPLQEEKGGGVSKFQVI
LCADLIFNRSEHKKLLWTCKTCLEEDGEVLVTYSHHDPGKRALDMAFFAL
ATQEEEREEGVEEGVGGWIVEDVKMEQHVDLFVESDGLDEERGKVYVKRL
RRRRGANRG
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mRNA from alignment at CM002469.1:202050..203760-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6663 ID=rna6663|Name=rna6663|organism=Nannochloropsis gaditana|type=mRNA|length=1711bp|location=Sequence derived from alignment at CM002469.1:202050..203760- (Nannochloropsis gaditana)
ACGTGTGGGCGGAAAGGAGAGTGTGGAGCGGCAAGAGGCATGGGATTGAG
AGACAAGTCAGTGTACGAGCGCAAGGGCAACAACGGTTTGGCAGGCAAAG
CGAGCAAGCTGTCGCTGAGGGCGAGCTGGCCTTTAAAAACCTTGCAACGG
AGCAGGAGAGAGTGTGGAGGCATTGCAAGCATGGAAACGAGGGGCAGATT
GCCGTTTGCAAGGGACATGAATGAATCTGTATAAGGCAAGTGGTTTGATG
CTTACGCAAGTTGCAGCCAGGCCTTCCTCCGGGCATCTTTTTTGGCCCCA
CGGGCTTCTATCGCAGCAGCCAGACAGCACTTACCGTCAACGTAACCAGC
CGCCACTCCCGCCCCAAATGACAGCGAGAATCATTTTTAAGTACATTTTT
GTATTGTATGGAACCTAAAGAGGGAACCGCGGCGGTAGCAGCCCGGCAGG
CTGCGGAGAAAGAAACCCGGGCGCGCCGTATACTCCAGGCACGTTTGCGG
AAGTTTTGATCTGCTCCTTACGACCGTTAGTGACATTATCCTCATCTCTT
TACGCTAGAATTTTTTGCAGATGGAAGGGGTGCAGCTTTGCGTGCCCCGA
CATGGGGTCGAGGACAACGAGGAGGAGCAGGACTGGGAGCTCGAGCAAGG
GCTGCTGTCCCTCTTTGCCACGAGCGACAAAGCAAATCCTTCTTCGGCTG
AGAATAGTGGTGAAGAAGATTCTTCTCCCATGCTCACCACACACACGTAC
ACGCGCAGAGACCCGACAGCCCTCCCGCTGGAACTAGAGATTAGTCTGCT
TTCATGCCGCCATTCCCTGTGGGGCCACAAGCTCTGGAATGCGGCCAAAG
TTCTCGGGGAGATGATCGACAGTCGACCGTCCCTTGTTCAAGGAAAATAT
TGCTTGGAGCTGGGAGCAGGGGCCGCGCTTCCTTCCCTTCTGGCTGCCTT
AAACGGGGCGAGGCGGGTCGTGTGTTCGGATTATGCCACCAGCACGGACC
GCGTCCTGGTGGCAGCCATGCAAACGAACATTGACAGGCTGGTGGCTCAG
GCATTCTTACCGCACGACGTATTAAGGGCGGTCGGATACGTGTGGGGCCA
GCCGATCAACAGTCTGCTGGCGCCTTTGCAGGAGGAAAAGGGAGGGGGAG
TGAGCAAGTTTCAGGTGATCTTGTGCGCGGACCTGATTTTCAATCGAAGT
GAGCACAAAAAATTATTGTGGACGTGCAAGACGTGTTTGGAAGAGGATGG
CGAGGTGCTTGTGACCTACTCGCACCATGATCCGGGAAAGCGTGCATTAG
ACATGGCTTTTTTCGCATTAGCCACGCAAGAGGAAGAAAGGGAGGAAGGG
GTGGAGGAAGGGGTGGGTGGGTGGATCGTGGAAGATGTGAAAATGGAGCA
GCATGTAGATCTTTTTGTAGAAAGTGATGGCTTGGATGAAGAACGGGGTA
AAGTGTACGTAAAGCGGCTCAGGCGAAGGAGGGGGGCCAACCGAGGATGA
TGGAGATTTTGATGGTGTTGCCCTCATATTCGAGAGCTGTCGCACATCAC
GCCTACAGAGGAAGCCGAACGTCTCTTTTACAGCTCTATAAATTAAGTTC
TTTGTCGCCCCTTAACACGGGACTCTCTAATGATTCGAATGCGCGTCATC
TAGTTCTAAAACGTTGGCCCCACTCTTTTTTCAAAGAATTTCGTACACTC
GAGATACTTAT
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Coding sequence (CDS) from alignment at CM002469.1:202050..203760-

>rna6663 ID=rna6663|Name=rna6663|organism=Nannochloropsis gaditana|type=CDS|length=930bp|location=Sequence derived from alignment at CM002469.1:202050..203760- (Nannochloropsis gaditana)
ATGGAAGGGGTGCAGCTTTGCGTGCCCCGACATGGGGTCGAGGACAACGA
GGAGGAGCAGGACTGGGAGCTCGAGCAAGGGCTGCTGTCCCTCTTTGCCA
CGAGCGACAAAGCAAATCCTTCTTCGGCTGAGAATAGTGGTGAAGAAGAT
TCTTCTCCCATGCTCACCACACACACGTACACGCGCAGAGACCCGACAGC
CCTCCCGCTGGAACTAGAGATTAGTCTGCTTTCATGCCGCCATTCCCTGT
GGGGCCACAAGCTCTGGAATGCGGCCAAAGTTCTCGGGGAGATGATCGAC
AGTCGACCGTCCCTTGTTCAAGGAAAATATTGCTTGGAGCTGGGAGCAGG
GGCCGCGCTTCCTTCCCTTCTGGCTGCCTTAAACGGGGCGAGGCGGGTCG
TGTGTTCGGATTATGCCACCAGCACGGACCGCGTCCTGGTGGCAGCCATG
CAAACGAACATTGACAGGCTGGTGGCTCAGGCATTCTTACCGCACGACGT
ATTAAGGGCGGTCGGATACGTGTGGGGCCAGCCGATCAACAGTCTGCTGG
CGCCTTTGCAGGAGGAAAAGGGAGGGGGAGTGAGCAAGTTTCAGGTGATC
TTGTGCGCGGACCTGATTTTCAATCGAAGTGAGCACAAAAAATTATTGTG
GACGTGCAAGACGTGTTTGGAAGAGGATGGCGAGGTGCTTGTGACCTACT
CGCACCATGATCCGGGAAAGCGTGCATTAGACATGGCTTTTTTCGCATTA
GCCACGCAAGAGGAAGAAAGGGAGGAAGGGGTGGAGGAAGGGGTGGGTGG
GTGGATCGTGGAAGATGTGAAAATGGAGCAGCATGTAGATCTTTTTGTAG
AAAGTGATGGCTTGGATGAAGAACGGGGTAAAGTGTACGTAAAGCGGCTC
AGGCGAAGGAGGGGGGCCAACCGAGGATGA
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Synonyms
Publications