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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100974g1.7601.mrna |
| Orig protein id | gnl|cribi|Naga_100974g1.7601 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:110606..111589 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna666 ID=rna666|Name=rna666|organism=Nannochloropsis gaditana|type=mRNA|length=2159bp
AAAACGTCACTTCCATAGTTTTCGGGGCTCACTACCACAGGAAGAGGGGG
CACCGTGCATGGCGTCGTAAATCGTGCTGAACAGTGAAGTATCTTTGAGA
TCGACATCGAAGGTGGAGGCGGGACGCGGAGGTTAGTAAGCCTCAGGACA
GCCGCAGACTTCCCTTTTGTGAATTACCCGTCCGATAAACACTATGTGCA
TCATGTTTCGACCAAAGTGCTGCACTTTAAGCCTCCTCCTCTTGAGCCAC
GCCGTGCAAACGGGCGCTTTCCTCCGCCCCCTCCCCCTCTTCCGGCTAGC
GCCCCTTCCATCGACCTCTCCAACCCGTCCTCTGTTCCTCCCTCGCAGCC
CTTTGTCTTTCACTGCCTCTTCAGCACCTCAAGAAGGGCAAGCGCCATCA
GTCCAGTCATCGCCACCGTCCCCTTTGTATGATCAGCAAGAAGGAGGATG
GAGCTATTTCCACAGCGTCCCACGTGCTTTGCCAGGGGGACGCACGTTGA
GGGAGGACAGGGTGAGCTCAGAATCTGGCGAGCCTTTCGCAGGAGAGGAA
GAAGGAGAAAGGGGCCGCCAACGTCGCCGGCTGGTCTTGTACGGCGCACA
GGGGGAGAGGGAGGGTGACCTGGTGTTTGTGGAGTCTCGGGGCAAGAGCC
TGCACTTGGAAACCCTGCAAGTCAAGGAAGGGGACGCGACGGAGGGCGGA
GGCGAAGCGGCGGCTGCAACACTTTCTCCCGCCCATAGCCTGATATTGGG
TGCCATGGAGCGGTTTTTGAACCGGGGAGGGCGCATAGGACAGGTGACGG
TGGGCGACGCCGGGCAGGAGGGGAGGGGCCTCGAGCCTCTTCAGGCCTCA
GCCACGGCCCTAGGCTTCCGACCCATCCCTCCCGAGGGGGCACCGGCCAA
GGACAAGGGGCAGGCGGGCCGCCCGGTCCTACAAGGCGGCCTGACTGACG
TCCTCCCCGAGCTCCAGGCTTTATCCAGGGATACCTCCGCGTCGGGCTCC
GCTTTGCTCCTGAACGTGCTGGGGAGGTTGGAACACGACGCCCAGAACTT
CAAGGCCGCCAGTGACTTGTACACGCAGGCCTTGACCTTGCAGCCGAACA
GTTCCACCATCTTCCAGAATCTGGGGGCGGCTTTTGCTTCCCAGGGGGAG
CATCAGCTGGCCTTTGCCTCCTTCCAACGGGCGATCGATTTGAATGCGAA
CGACCGTTACACGTATTTCAAACTCGGGATGATGTACGAACAGCTGGCGA
CGGGCAAGTACAAGGAAGCCGCCGAGCACGCCTTGAGTTGCTACGCGTTT
TATGTGGACGGGCGGGAGGGCGGGGAGGACACAGACGCCCTGACCATCTA
CGGGAACTTGCTGGTGAAGCGGTTGTGCCCCGCGGAGGCCGTCGAGGTGT
ACAAACGGGCCTTGGCCCTGGAAGCAGGGCTTTGGAACGTCTGGTTCAAC
ATGGCAAATGCCTATTTGAAGATTGGGGAGAAGGAAGATGCCATCATTGC
GCTCCAGCAGACGCTGTCGCTCAACCCGAACGTCTCCGCCGCCCGTCACC
TCCTCCTCTCCATCACAGGGGCCCAAGGAGGGGGAGAGGGAGGGGCGGCC
GCCCCTGTAGAAGCTGATCCTGCCTATGTGGTGGAGCTATTTGACTACTA
TGCGCCTACCTACGACCAGCACATGAAAGAAGGCCTCCTCTACACCGCCC
CTCGGATCCTGCGTCAAGAAGTCCGGAAGGTCCTGAACCACACGCTCTTC
ACTGAGGGGGCCATGGGCCCCGTCACGCCCGAAGGAAGCGGGGAGGCCCT
GCTGCGGGCATTGAACAAGAGCATGCGCATCCTTGACTTAGGCTGTGGGA
CGGTAGGCTGGCGGTGGGGGAGGGGTGGGATGAAAGGGGGGCGTGGTCGT
TAGGGTGGTGGGGGGGGATCTGGGAGAGACGTGGGAGGAGGGGTGCTTGG
TATGGTGGTGGGTGGGCGCACAGTGGATGTCCTTCCAGAAGGTCTGGCGC
TGTGGATCCCCTTCTAGAACATTTCTTGCTGTGGGTATCCTTCTAGAACA
TCTGTCTTGTCTTGGAGAGGCACCAGGTGTCTGGCATGGGTCTCACCTTC
CCCCAGGCCCTCCTGTCCGCCCATTTTTCCTCCTTTAACCCTCACTTCAT
CTCACCCCT back to topprotein sequence of rna666 >rna666-protein ID=rna666-protein|Name=rna666|organism=Nannochloropsis gaditana|type=polypeptide|length=269bp
MSEKTEDAVNQAQGEGKEMEVIEGVDSSTDRDRYEASGLGEGREEDAGVV
APTEPPTLRESDDEESDDDDEEVKGKQGRRAGAEGVLGGARRAEQGRKDD
GEGDNEAEDEEEEEEDEEKGGEDEEEEEEEEEEDSDSDESDEGDGRKKAM
LVKKKGRYGKKKGGNVKRKRRGGFLTASMVDDEAAESGGESEEEGGGRKG
GKKGKRRMRKQRGSSSEDESEGGEEENEYVHDDFVVPDEVAAEEEQRAAR
EARKARGSSSDDSEEEAER back to topmRNA from alignment at CM002456.1:110606..111589+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna666 ID=rna666|Name=rna666|organism=Nannochloropsis gaditana|type=mRNA|length=984bp|location=Sequence derived from alignment at CM002456.1:110606..111589+ (Nannochloropsis gaditana)
ccctgtaaACATTCCATCCCCACAGGGTATTTCGCAAGTGAAAGTCCTGT
ACTCACGCCTCGGCTTTTGCTGTCAGCAAAGCGATACCGGACAGTGAGTG
GGATTTCCGGTTGCCGTTTTAAATCTGTTGGCTTTTCGGGGGGTAATGAG
TGAAAAAACAGAGGACGCCGTGAATCAGGctcaaggggaagggaaggaaa
tggaagtcATTGAGGGAGTCGATAGCTCCACAGACCGAGACAGATACGAA
GCCAGCGGATTGGgagaaggtagggaggaggacgcaggtGTAGTTGCGCC
CACAGAACCTCCCACCTTGAGAGAGAGCGATGATGAAGAAAGTGATGACG
ATGATGAGGAGGTAAAGGggaaacagggaaggagagcgggagcggaagga
gtACTAGGGGGCGCCCGCAGGGCTGagcagggaagaaaagatgatGGTGA
AGGTGATaacgaggcggaggacgaagaggaagaggaagaggacgaggaaa
agggaggagaggatgaggaggaggaggaggaggaggaggaggaggattct
GATTCAGACGAGTCCGATGAGGGCGATGGACGGAAAAAGGCCATGCtggt
gaagaaaaaggggaggtatgggaagaagaagggaggaaacgtgAAGCGGA
AACGCCGTGGTGGGTTCTTGACCGCGTCCATGGTCGACGACGAGGCAGCG
GAGAGCGgtggggaaagcgaggaggagggcgggggaaggaagggggggaa
gaaggggaagcgtCGCATGCGCAAGCAGAGGGGCAGCAGTTCGGAGGATG
AgtcggaaggaggggaggaagagaatgaGTACGTGCACGATGACTTCGTC
GTGCCCgacgaggtggcggcggaggaggaacagcGTGCCGCCCGTGAGGC
TCGGAAGGCGCGGGGCAGCTCAAGCGAcgacagcgaggaggaagcggaac
ggtgagagggagaggagggagggagggagggagg back to topCoding sequence (CDS) from alignment at CM002456.1:110606..111589+ >rna666 ID=rna666|Name=rna666|organism=Nannochloropsis gaditana|type=CDS|length=810bp|location=Sequence derived from alignment at CM002456.1:110606..111589+ (Nannochloropsis gaditana)
ATGAGTGAAAAAACAGAGGACGCCGTGAATCAGGctcaaggggaagggaa
ggaaatggaagtcATTGAGGGAGTCGATAGCTCCACAGACCGAGACAGAT
ACGAAGCCAGCGGATTGGgagaaggtagggaggaggacgcaggtGTAGTT
GCGCCCACAGAACCTCCCACCTTGAGAGAGAGCGATGATGAAGAAAGTGA
TGACGATGATGAGGAGGTAAAGGggaaacagggaaggagagcgggagcgg
aaggagtACTAGGGGGCGCCCGCAGGGCTGagcagggaagaaaagatgat
GGTGAAGGTGATaacgaggcggaggacgaagaggaagaggaagaggacga
ggaaaagggaggagaggatgaggaggaggaggaggaggaggaggaggagg
attctGATTCAGACGAGTCCGATGAGGGCGATGGACGGAAAAAGGCCATG
CtggtgaagaaaaaggggaggtatgggaagaagaagggaggaaacgtgAA
GCGGAAACGCCGTGGTGGGTTCTTGACCGCGTCCATGGTCGACGACGAGG
CAGCGGAGAGCGgtggggaaagcgaggaggagggcgggggaaggaagggg
gggaagaaggggaagcgtCGCATGCGCAAGCAGAGGGGCAGCAGTTCGGA
GGATGAgtcggaaggaggggaggaagagaatgaGTACGTGCACGATGACT
TCGTCGTGCCCgacgaggtggcggcggaggaggaacagcGTGCCGCCCGT
GAGGCTCGGAAGGCGCGGGGCAGCTCAAGCGAcgacagcgaggaggaagc
ggaacggtga back to top
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