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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100040g7.2008.mrna |
| Orig protein id | gnl|cribi|Naga_100040g7.2008 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:197143..197871 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6659 ID=rna6659|Name=rna6659|organism=Nannochloropsis gaditana|type=mRNA|length=1380bp
ATGCCGAGTCGCATCTCCTACTTAGGCGTTGCATTTTCGTTGGCTGCCGC
CTCCTATCATTTTGCTTCTTCTTTTCAGCTTCGCATGACAGTCGGGGGTG
GTGTTCATCAGAAGCGTCGCAAAACTCTCAACAACCAGCACAAGGTACCT
CCTTCTGCGGTAGACACAATCAAGACCACGAAAACGACAGAGGAAGACAC
TACAAATAAGAGCAAACACCCCTTCCTGGAGACCAGTCCTTTCCACTGCA
CGCTGTACGACGGGCTCAACCGGCCCTGGACAAAAGAAGGGGCTCGGCCC
ACCACGCTGGAGGGACGTTCATGGCACGCAGATATGCCTCTTCCCCTCGC
CAAAAAGATGATTGTCGAGGCAGCGCAGGACCAGAGCGTGAGCAAAGAGA
TGTTAATGGCCGCCCTACACATGGTAGAGTACGATGCGGCCTTCGAAGCC
GGGGCAAAGGGAGGGTGGGAGGTGGGCGATTTGGAGGGCGAGTGGCGTCT
GGCTTTCAATGCGGATGCGCCCTTCTTGGAGAGCCGACGGGACAGGTGGG
GGTATTTGATTCAGGCGCAGGAGAAGGAGGGAGAGGCAGAGGAGGAGGTG
GCGGTGGTGGGTCTGCGTCTCGACACCCGCGCCTCGACCATTGTGCTGGA
CTCTTTGCAGGAACCCCGGCCCAAGTCCTTTCAAGGAACGTTCTGGAAGG
ATCGCGGGGGAAAGGTGCACGTGGATGTGACGCGCGTCCAGCTCTTAAAA
GCCATGGACCCCGCGAATGAGGAGGAGGAAGCGGTGGGGGAGGCCGGGGG
GGGTCGGCTCTTGCCCGAGTCGGAGCTGCCGTTAATGGACGCCTTTTTGC
GTCCGGGTAGCTTTTTCGAGGTGATCCAGGTAGACAAGCTTCATTTGGCC
CTTCGCTACCACCTAGGCGGGGCGCTTGAATCGTCGCTCTTGATTTTCAA
CAAGGTGGTGCCCTTCAGTGCGGAGGCGGGGGGGCTGCCAGAGGGAGGAG
AGAGTGTACAGTGGAGGGAGGTCGGCTCGACGGAAGCAGGGGCGGGAATC
GAGGACAAGTCCGCCCCAGAGGCCGAAGCCGAAGGCACTCATGGTAAGGA
CAGGTGGGGACATGTGAAGAAAACCAACCGCGAGGGGCAGCCCCGGTATG
CGAACGCAGAAGAACGCCTGCAGCAATTGCGGCAGCGGAGGCGGATGCTT
GGGGGCTACGATTCGTTCTGGGAGTACCTGGAGGAGGAGAAAGTGTCCCT
TTTCCTGGTCCTCGCCTTTCCCGCCTTTGTGAAGGCCAGTCCGCACCTGC
TGGCCGCGGCCCATGTCAAATGGATGCTGCTCCAGGAGATGGCGGGCTCC
GCACTCCAGGCATGGGGCGGGCAATCCTAG back to topprotein sequence of rna6659 >rna6659-protein ID=rna6659-protein|Name=rna6659|organism=Nannochloropsis gaditana|type=polypeptide|length=196bp
MCGALFFAHYLFTIPIDMGGLRSERVPQGPPWRLDTQPSDSLYSSGRGDR
ARDQPPSLRAKCISYASRWIRPVNRKYGQRQSGYPGLSYIRRKSQGKNKC
PQPKVLRQDSKATIVWDKLRAEHKSLSGAVLKHLRGGGGTRENRSVLHDR
KAKRHLNAIPYISTRALLYNVQNSIFRFLNCSKRIAWSESQWKHSK back to topmRNA from alignment at CM002469.1:197143..197871+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6659 ID=rna6659|Name=rna6659|organism=Nannochloropsis gaditana|type=mRNA|length=729bp|location=Sequence derived from alignment at CM002469.1:197143..197871+ (Nannochloropsis gaditana)
ATGTGTGGAGCCTTGTTTTTTGCCCATTATCTGTTTACTATTCCGATTGA
TATGGGGGGGTTGAGGTCCGAAAGGGTTCCCCAGGGGCCGCCGTGGCGCC
TCGACACCCAACCATCCGATAGTTTGTACagcagcgggagaggggatCGC
GCTCGCGATCAGCCCCCTTCTCTCCGAGCCAAGTTCTGATAAAATTGTAT
TGTTGATCATAATCTTTCGAATGCACGACATTGTTACTAACCAGTAATTT
TAAATAGATGTATTTCTTACGCATCACGATGGATAAGGCCAGTAAATAGA
AAATACGGTCAAAGGCAGTCGGGCTACCCAGGCCTGTCGTACATCAGGCG
GAAAAGTCAGGGAAAGAATAAATGTCCGCAGCCTAAGGTACTAAGGCAAG
ATAGCAAAGCTACCATAGTGTGGGACAAGTTGCGTGCAGAACACAAGTCA
TTGTCGGGGGCTGTGTTAAAACACctgcgaggaggcggtgggacCAGGGA
AAACCGCAGTGTGCTGCATGATCGAAAAGCCAAACGTCACTTAAACGCGA
TACCCTACATTTCCACCAGGGCATTGTGTTGACTGTCAAATTTGAGGTAA
ACGAAATCATCTTACTCTGAAAAGGAGACTGGTCTCAAAGTGTACAACGT
CCAAAATTCAATTTTTCGATTTTTAAATTGTTCAAAAAGAATAGCCTGGT
CCGAATCGCAATGGAAACATTCAAAATAA back to topCoding sequence (CDS) from alignment at CM002469.1:197143..197871+ >rna6659 ID=rna6659|Name=rna6659|organism=Nannochloropsis gaditana|type=CDS|length=1773bp|location=Sequence derived from alignment at CM002469.1:197143..197871+ (Nannochloropsis gaditana)
ATGTGTGGAGCCTTGTTTTTTGCCCATTATCTGTTTACTATTCCGATTGA
TATGGGGGGGTTGAGGTCCGAAAGGGTTCCCCAGGGGCCGCCGTGGCGCC
TCGACACCCAACCATCCGATAGTTTGTACagcagcgggagaggggatCGC
GCTCGCGATCAGCCCCCTTCTCTCCGAGCCAAATGTATTTCTTACGCATC
ACGATGGATAAGGCCAGTAAATAGAAAATACGGTCAAAGGCAGTCGGGCT
ACCCAGGCCTGTCGTACATCAGGCGGAAAAGTCAGGGAAAGAATAAATGT
CCGCAGCCTAAGGTACTAAGGCAAGATAGCAAAGCTACCATAGTGTGGGA
CAAGTTGCGTGCAGAACACAAGTCATTGTCGGGGGCTGTGTTAAAACACc
tgcgaggaggcggtgggacCAGGGAAAACCGCAGTGTGCTGCATGATCGA
AAAGCCAAACGTCACTTAAACGCGATACCCTACATTTCCACCAGGGCATT
GTTGTACAACGTCCAAAATTCAATTTTTCGATTTTTAAATTGTTCAAAAA
GAATAGCCTGGTCCGAATCGCAATGGAAACATTCAAAATAAATGTGTGGA
GCCTTGTTTTTTGCCCATTATCTGTTTACTATTCCGATTGATATGGGGGG
GTTGAGGTCCGAAAGGGTTCCCCAGGGGCCGCCGTGGCGCCTCGACACCC
AACCATCCGATAGTTTGTACagcagcgggagaggggatCGCGCTCGCGAT
CAGCCCCCTTCTCTCCGAGCCAAATGTATTTCTTACGCATCACGATGGAT
AAGGCCAGTAAATAGAAAATACGGTCAAAGGCAGTCGGGCTACCCAGGCC
TGTCGTACATCAGGCGGAAAAGTCAGGGAAAGAATAAATGTCCGCAGCCT
AAGGTACTAAGGCAAGATAGCAAAGCTACCATAGTGTGGGACAAGTTGCG
TGCAGAACACAAGTCATTGTCGGGGGCTGTGTTAAAACACctgcgaggag
gcggtgggacCAGGGAAAACCGCAGTGTGCTGCATGATCGAAAAGCCAAA
CGTCACTTAAACGCGATACCCTACATTTCCACCAGGGCATTGTTGTACAA
CGTCCAAAATTCAATTTTTCGATTTTTAAATTGTTCAAAAAGAATAGCCT
GGTCCGAATCGCAATGGAAACATTCAAAATAAATGTGTGGAGCCTTGTTT
TTTGCCCATTATCTGTTTACTATTCCGATTGATATGGGGGGGTTGAGGTC
CGAAAGGGTTCCCCAGGGGCCGCCGTGGCGCCTCGACACCCAACCATCCG
ATAGTTTGTACagcagcgggagaggggatCGCGCTCGCGATCAGCCCCCT
TCTCTCCGAGCCAAATGTATTTCTTACGCATCACGATGGATAAGGCCAGT
AAATAGAAAATACGGTCAAAGGCAGTCGGGCTACCCAGGCCTGTCGTACA
TCAGGCGGAAAAGTCAGGGAAAGAATAAATGTCCGCAGCCTAAGGTACTA
AGGCAAGATAGCAAAGCTACCATAGTGTGGGACAAGTTGCGTGCAGAACA
CAAGTCATTGTCGGGGGCTGTGTTAAAACACctgcgaggaggcggtggga
cCAGGGAAAACCGCAGTGTGCTGCATGATCGAAAAGCCAAACGTCACTTA
AACGCGATACCCTACATTTCCACCAGGGCATTGTTGTACAACGTCCAAAA
TTCAATTTTTCGATTTTTAAATTGTTCAAAAAGAATAGCCTGGTCCGAAT
CGCAATGGAAACATTCAAAATAA back to top
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