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Properties
| Property Name | Value |
|---|
| Product | Telomere length regulation protein, conserved domain protein |
| Orig transcript id | gnl|cribi|Naga_100040g3.2015.mrna |
| Orig protein id | gnl|cribi|Naga_100040g3.2015 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:187525..191393 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6655 ID=rna6655|Name=rna6655|organism=Nannochloropsis gaditana|type=mRNA|length=2130bp
TTTCACCCCTGGCCTCGAATTACCACGCTCATCCGTGCAGGCTCGATCAT
GCTTGTCGGCCTTTGACTCACTGCACGCAACCTTTCTCCTCTTCTCCATT
GCCAGAACGGGGCGAGCGAGTCCTCCTGATCGAGACCGGGGAGGACGAAC
ACCTGAACCCCCTTACGCGCTGGGGGTACTTTTTCCCCTCAGGCTCCTAT
TCCCACCTGTATCGGAATTATTTCACGGAACCGGAGCCAAGAGTGAACAA
TCGCAGGCTTTACCACCAGGCTGCCAAAGCCTTGGGAGGAGGAACGGCGG
TGAACGCCATGGTATGGACGTGGGGGGACCGTCAGGACTGGGAGCTCATC
GACTTGGAGGGCTGGTCCTTCGAGGACGTCTATCCCTATTTCCTCAAGTC
TGAAAACTACACGGGGGCGTCCTCCGCCTACCGCCACGCCGTGGCCCGGG
GGCACGCCGGTCCCATAACCCTGACCAGCTTTCCCGCCAACGAGGCCACC
CTAACGGCCGTCTCCACGGCGGCAGAGACCTTCAACGTTCCTCCCGAAGT
AGACAACAATGGTGGTGTGCACGAAAGCGTGGCGGTCGTGCAACGGGATT
TCCAGGGGCCCACCATCGACACGGGCGTGCGGATGGGCGCCTTCATGGCC
TACCTGCGTCCTGCCATGGCCTCTCTCCCCCCCGAGCGCCTCCGAGTCTT
GACACGCGCAACGGTCTTGCAGGTGCTGGTAGAACCCTCAGAGGAGACGG
GGAGGGAGGGAGGGCTGGAGGCGGTGGGCGTGCGCTTCCTCCACGACGGG
GTCTGCGGGGAGGCCTATGCGAAGAGGGAGGTGGTCCTGGCCGCCGGGGC
CTACAACACGCCTAAGCTCTTGCTCTTGTCCGGGATCGGAGATCCAGGCC
ATTTGGAGGAGATCGGGATCGAGTGCGTCCTGAGCCTCCCTGGGGTGGGG
AAACGCCTGGTTGACCACATCAACCCGGGCTCCCTCATGTTCACCGGCCC
CCCCCGCAAGGATTACGACGCCAACATCGTGGCGACCTACACGCGGACGG
GCATCGTGCCGGACCTGACGCCAGACGTGGAGTTGGGATTCATCATGGGC
CCACCGGTGGAGGAGCCAGCGCATTGGGACAAGGTCCCCTCCCTTTACGT
CTTCTACGCGCTCTGGCTCTTGCACGACGGCGTGGGCTCGGTCCGTTTGA
AAAATCGAGACCCCTTGGAGGACCCGGTCATCGTCTCCGGGTATTTGAAG
ACCGCCACGGACTTGAAGAGGCTGGTGCGGATTTTTCGTATGCTCATTGA
GTGGTCTCAGACTTTTGCGCGTTCGTCGGGGTTGAAACTGGAGCAGCAGC
GATCGGGGGGGAACGCTATTTTTGTTACAGAAGACAGCAGTGACGAGGAG
ATTCTCAAAGCGGCGCGCATGGTCCTATCCACACACTGGCACGCCGCTCA
GTCCTGCAGAATGGGAAACCCCGAGCACGACCCGGATGCGGTGGTGGACC
CGGAGTTCAAGGTGGTGGGGATGGAGAAGCTAAGGGTAGTGGACGCCTCC
TCCCAGCCCGTCCTGACTAACGGACACCCAATGGCAGCTTTGGTGATGAT
GGCCGAGCGGGCAGTCGATTTTATGTTGGGGAAGGCAAAGGAAAGATAGC
AAGACGAAAATGGTGAGCGAAACGATGTGCTCGGGGAGACGGGTGTGGCG
GAGGATGTCTGCACTTTTTGGCTACGTGCATTGGGAGAATGAGGGAGGCG
ACGGGGCAAAGTCACCTTGTTGAAAAGAAAGGGAGCGTTGTGTAGAAGAT
GCGGAACGGAGTGGAACCGGAGGAAACATGGGCGGAGGACAAGCACCACG
CGTGGGGTCGCACAGACTGGCGCCAGATTTAACATACATGTGCGTGTGCG
GACATAGCACGGCGTGATGCCGAATAGAACGATCTGGGAGCGAAAAAGAG
ACTCAAGGCGATAGGCTGCTACTTGATTTTTCATCTCCCTCCAGCCGAGC
CCGATATCAGGCTCACTCAATGCCATGCGTTCTTTCTAAATCCATTCCCT
TCTTACGGTCCTTCGTACATGACTGTCACTCTTTCCCCTCGACGGTCAGC
GTCCTTTCCTCACTTGACTCAATATGGAAA back to topprotein sequence of rna6655 >rna6655-protein ID=rna6655-protein|Name=rna6655|organism=Nannochloropsis gaditana|type=polypeptide|length=1048bp
MKPASPPAPASPALPDLIASLDRLSCSSPSTNSTKCTPLASSASSPPFQA
TIAEALTQAEVTLASPATPPQSIISFLLFLFRDILPRLLDSHDTAGPEHD
RQERHEADLCGFPETVQVLEHFLKPGQAGTSPPNLPSWCLFVALSEAFSS
PPSRPISTSTIDPQPRVSSHARPALPSSSTPSGTFLLRALESFLAPPPAD
GFTRMVDELCQQSLGPSSEASARSAIDRVLQSLSLLPVRLANRLQGALPP
LFNLPALYTAFTDRLLTRFLASPPSSLPPSLLLLWGCLVLKACKTGQADL
PASRWLDLGLSSPFPSPSPSLLVESIPLPALEPFILALLRRLVVLLFPPT
PSSFSVSLPHAQGVLHCLLPSLLPSSPVAPALRTILLDKVLLCPSLPPFS
PLLLHPRTTALLLTDLLASSLPPSLLPSRLLLPLATLWQERRFILRSDLS
RQELVTHALLRALHLLHRPPVTPSDALSGRAALEGEAGLMPALVEGVSAH
LGSALALVREQGMRVAEAFAVLMGQDLKFEELDGKREGEGEGEEEGEVRI
DGSEERSERGPSGVEEGGGEEVRRKEEEEEEEGAPWYEPLDLSDDEADLA
AAPPPRYLRRLLDALRLRDEEGAPEKVRAALTEAAALIRRLPVDLPDLGR
NLARELLTLENRFNFENFEHLKREALVALVASSPGEVAPALAVLAYDGNM
AFGTRLEALDLMVRGARELGGKEGGKEGGKEGGKEGGKEGGKEVGKEGGK
EGGEEGARGEERAGTRPRTQGKRRLVSASGQVLTSSSRQETLLPQGDPAT
AVEPAPNPRPDKAEEVGGTSDLTRRWGYRRRPPPRMIRNRFAPVAAPAFF
EPLLAAMIESCSPRPSSGPTSPPSSFLSVASPSTSPPSRPPSIALHILPP
LSPSSTLPPSSPCPTLWARDSDQALALSQTIHALATFVDCAGPFNPGTPQ
LAEALLTVAWPLRTSRFPELRRAVLLAVACAMTFMNMEWFVGEGRGGGQE
GGKALRAMMEWTAATGEGDPDEECRKLARTLSGGGGHSKGKGLGLLAS back to topmRNA from alignment at CM002469.1:187525..191393+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6655 ID=rna6655|Name=rna6655|organism=Nannochloropsis gaditana|type=mRNA|length=3869bp|location=Sequence derived from alignment at CM002469.1:187525..191393+ (Nannochloropsis gaditana)
CGCAATTCATGCACATCAGTACGAGGCTGAGACCGTGAAGCATATGCCCT
GGCGGCAGGTAGAATGGAAAGCGCATAGGACTTGGTTTCCCAGggatttg
gagggagaggctgcggCGATGCAGGTCAGCATGTTCCATCTCGGCACACC
TCGCACAAAAGAACACTTCGTTGACGTAATCCATCCGCGAAAACAGCGTT
TCGCACGGTACCTTGCAAATATCATCGTATAATTGTGGGGAAGTGATCCT
GACCGGCCAAGAAAAGTGTGTTGACCTGAAAAATTGCGTACATGCGCCAA
TATTTACTTCTTCACTCCccatccacccctccctgATAGCATCAGGCACA
ATAAATACATGCCAGCCCCTTGTCGCCGAAACTCCACATGGACACTCAAT
AGAAACGTAACTGTTGACTTGAAAGTGGCGTATTCGTTCACGTCCTTCCC
CAAAAAACTTCTGGCATGAAgcccgccagccccccgGCTCCTGCAAGCCC
TGCCTTGCCGGACCTGatcgcctccctcgaccgactttcctgctcctctc
catccacaAACTCCACGAAGTGCACCCCACTCGCATCATcggcctcttct
cctccctttcaagcGACGATTGCGGAGGCATTGACCCAGGCTGAAGTCAC
GTTGGCCTCTCCCGCAACACCGCCTCAAAGTATCATTAGTTTCCTCCTAT
TTCTCTTCCGCGACATTTTGCCCCGTCTCCTCGACAGCCACGATACTGCT
GGGCCCGAACATGATCGGCAGGAAAGACACGAAGCGGACCTGTGTGGATT
TCCGGAGACCGTGCAGGTCCTAGAGCACTTTCTGAAGCCAGGACAAGCGG
GCACTTCgcctcccaacctccccagcTGGTGCCTCTTCGTCGCGCTCTCG
GAGgcattctcctcccctccctcccgtcccatCTCCACGTCCACAATCGA
TCCACAACCGCGCGTCTCATCCCATGCCCgacccgcccttccctcctcat
caacgCCCTCcggcaccttcctcctgcgcgcCCTCGAAagcttcctcgcc
cctccccccgccgacGGCTTCACTCGCATGGTAGATGAGCTCTGCCAGCA
ATCTCTCGGCCCAAGCTCCGAGGCCAGCGCCCGCTCCGCcatcgatcgcg
tcctccagtccctctccctccttcccgtccggCTCGCCAACCGGCTCCAg
ggcgccctcccccctctcttcaacCTCCCAGCCCTCTACACCGCCTTTAC
CGACCGCCTCCTCActcgcttcctcgcctcccccccttcttccctccctc
cctccctgcttctcctttgGGGCTGCTTGGTGCTCAAAGCCTGTAAGACG
GGCCAAGCCgacctccctgcctcccggtgGCTCGACCTggggctttcctc
ccccttcccctccccctccccctccctcctcgtcgaatctatccctctcc
ccgccctcgagcccttcatcctcgcccttctccgACGTCTggttgtcctc
ctcttccctcctaccccttcttccttctccgtctccctgcCCCACGCACA
AGgcgtcctccactgcctccttccctccctcctcccctcctcccccgttg
cGCCGGCCCTGAGGACGATCCTCCTCGACAaggtcctcctctgcccctcc
cttcctcccttctcccctctcctcctccacccccgcaccaccgccctcct
cctcacggaccttctcgcctcctccctccccccctccctcctcccctccc
gcctcctccttcccctcgccaccctctgGCAAGAGCGGCGCTTCATCCTC
CGTTCCGATCTGTCCCGCCAAGAACTCGtcacccacgccctccttcgcgc
cctccacctcctccaccgccccccggTCACTCCCTCCGACGCCCTCAGCG
GACGCGCGGccctggaaggggaagcgggtcTGATGCCGGCCCTGGTGGAA
GGCGTAAGCGCACATTTGGGCTCGGCTTTGGCCTTGGTCCGGGAGCAGGG
GATGCGGGTGGCAGAGGCCTTCGCCGTCCTCATGGGCCAGGACTTGAAGT
TTGAAGAGTtggacgggaagagggagggggagggggagggggaggaggag
ggggaggtccgGATCGATGGAAGCGAAGAGAGATCGGAAAGGGGGCCGTc
gggggtggaagaaggggggggcgaggaggtaaggaggaaggaggaagagg
aggaggaggagggagccccGTGGTACGAGCCGTTGGATTTATCCGACGAC
GAAGCCGACCTGGCGGCCGCTCCGCCCCCTCGGTACTTACGGCGCCTCTT
GGATGCCTTGCGCCttcgggacgaggagggcgctCCGGAGAAAGTGCGCG
CCGCTTTGACGGAAGCTGCCGCCTTGATCCGACGACTCCCGGTGGACCTG
CCCGACCTAGGCAGGAACTTGGCCCGGGAGCTCCTGACGTTGGAAAACCG
TTTCAATTTCGAAAATTTTGAACATTTGAAACGCGAAGCCTTGGTTGCCT
TGGTGGCCAGCTCCCCCGGGGAAGTGGCTCCGGCCTTAGCGGTTTTGGCC
TACGACGGGAACATGGCTTTCGGGACGCGATTGGAGGCGTTGGATTTGAT
GGTGCGAGGAGCTAGGGAactgggcgggaaggagggcgggaaggagggtg
ggaaggagggcgggaaggagggcgggaaggagggcgggaaggaggttggg
aaggagggcgggaaggagggcggggaggagggtgcgaggggagaagagag
ggcgggcaccaGGCCCCGCACGCAAGGAAAACGGCGGCTGGTGTCCGCGT
CAGGGCAGGTCTTGACCTCAAGTAGCCGCCAAGAAACGCTGTTGCCCCAA
GGAGACCCTGCGACAGCCGTAGAGCCTGCCCCAAATCCCCGCCCGGacaa
agcggaggaggtgggggggacCTCGGATCTGACCCGTCGGTGGGGCTACC
GCCGgcgtccgcccccccgcaTGATTCGGAACCGGTTCGCCCCCGTGGCC
GCCCCTGCGTTTTTTGAACCTCTACTGGCGGCGATGATCGAGTCCTGCTc
accccgcccttcctcagGCCCGacctcgcccccttcctccttcctgagcg
tcgcctccccctccacctcccccccgtctcgccctccttccattgccctc
cacatcctccctccgctttccccgtcctccaccctccctccctcctcccc
ctgccccacctTGTGGGCCCGGGACTCGGACCaggccctcgccctctccc
agaCCATCCATGCGCTCGCCACCTTTGTCGACTGCGCCGGACCCTTTAAT
CCCGGCACCCCCCAACTGGCCGAGGCCCTGCTAACGGTCGCCTGGCCATT
ACGCACCAGCCGTTTCCCGGAACTCCGTCGGGCGGTTTTGTTGGCCGTTG
CCTGCGCCATGACCTTTATGAACATGGAGTGGTTCgtcggagaagggagg
gggggagggcaggagggaggaaaagcattGCGGGCGATGATGGAATGGAC
GGCagcgacgggggagggggacccGGACGAGGAATGCCGCAAGCTGGCTC
GTACCttgagtggggggggggggcacagtAAGGGTAAGGGGTTGGGCTTG
TTAGCTTcgtgagggaagggagggggtgggtggccaggggggacggggcc
cTGGCTTGTGCTCGGTAAGAAAGAAGGAGTCAATGTCTCTGACTAATGCA
AAGTGGGGGGGCAGGGTTCTGAAGAAGGTGCAATCTTGATGAACGACCGA
ACGAATTGACAGGTCTGCCCCCAAAAACGTAACGACAAGGCTTAAAAAGC
GACGCAGAGACAAATGCCCGGCCATATTTCTTTCATTGCCCCTCTTCAct
gcccttgctctccttttcc back to topCoding sequence (CDS) from alignment at CM002469.1:187525..191393+ >rna6655 ID=rna6655|Name=rna6655|organism=Nannochloropsis gaditana|type=CDS|length=3147bp|location=Sequence derived from alignment at CM002469.1:187525..191393+ (Nannochloropsis gaditana)
ATGAAgcccgccagccccccgGCTCCTGCAAGCCCTGCCTTGCCGGACCT
GatcgcctccctcgaccgactttcctgctcctctccatccacaAACTCCA
CGAAGTGCACCCCACTCGCATCATcggcctcttctcctccctttcaagcG
ACGATTGCGGAGGCATTGACCCAGGCTGAAGTCACGTTGGCCTCTCCCGC
AACACCGCCTCAAAGTATCATTAGTTTCCTCCTATTTCTCTTCCGCGACA
TTTTGCCCCGTCTCCTCGACAGCCACGATACTGCTGGGCCCGAACATGAT
CGGCAGGAAAGACACGAAGCGGACCTGTGTGGATTTCCGGAGACCGTGCA
GGTCCTAGAGCACTTTCTGAAGCCAGGACAAGCGGGCACTTCgcctccca
acctccccagcTGGTGCCTCTTCGTCGCGCTCTCGGAGgcattctcctcc
cctccctcccgtcccatCTCCACGTCCACAATCGATCCACAACCGCGCGT
CTCATCCCATGCCCgacccgcccttccctcctcatcaacgCCCTCcggca
ccttcctcctgcgcgcCCTCGAAagcttcctcgcccctccccccgccgac
GGCTTCACTCGCATGGTAGATGAGCTCTGCCAGCAATCTCTCGGCCCAAG
CTCCGAGGCCAGCGCCCGCTCCGCcatcgatcgcgtcctccagtccctct
ccctccttcccgtccggCTCGCCAACCGGCTCCAgggcgccctcccccct
ctcttcaacCTCCCAGCCCTCTACACCGCCTTTACCGACCGCCTCCTCAc
tcgcttcctcgcctcccccccttcttccctccctccctccctgcttctcc
tttgGGGCTGCTTGGTGCTCAAAGCCTGTAAGACGGGCCAAGCCgacctc
cctgcctcccggtgGCTCGACCTggggctttcctcccccttcccctcccc
ctccccctccctcctcgtcgaatctatccctctccccgccctcgagccct
tcatcctcgcccttctccgACGTCTggttgtcctcctcttccctcctacc
ccttcttccttctccgtctccctgcCCCACGCACAAGgcgtcctccactg
cctccttccctccctcctcccctcctcccccgttgcGCCGGCCCTGAGGA
CGATCCTCCTCGACAaggtcctcctctgcccctcccttcctcccttctcc
cctctcctcctccacccccgcaccaccgccctcctcctcacggaccttct
cgcctcctccctccccccctccctcctcccctcccgcctcctccttcccc
tcgccaccctctgGCAAGAGCGGCGCTTCATCCTCCGTTCCGATCTGTCC
CGCCAAGAACTCGtcacccacgccctccttcgcgccctccacctcctcca
ccgccccccggTCACTCCCTCCGACGCCCTCAGCGGACGCGCGGccctgg
aaggggaagcgggtcTGATGCCGGCCCTGGTGGAAGGCGTAAGCGCACAT
TTGGGCTCGGCTTTGGCCTTGGTCCGGGAGCAGGGGATGCGGGTGGCAGA
GGCCTTCGCCGTCCTCATGGGCCAGGACTTGAAGTTTGAAGAGTtggacg
ggaagagggagggggagggggagggggaggaggagggggaggtccgGATC
GATGGAAGCGAAGAGAGATCGGAAAGGGGGCCGTcgggggtggaagaagg
ggggggcgaggaggtaaggaggaaggaggaagaggaggaggaggagggag
ccccGTGGTACGAGCCGTTGGATTTATCCGACGACGAAGCCGACCTGGCG
GCCGCTCCGCCCCCTCGGTACTTACGGCGCCTCTTGGATGCCTTGCGCCt
tcgggacgaggagggcgctCCGGAGAAAGTGCGCGCCGCTTTGACGGAAG
CTGCCGCCTTGATCCGACGACTCCCGGTGGACCTGCCCGACCTAGGCAGG
AACTTGGCCCGGGAGCTCCTGACGTTGGAAAACCGTTTCAATTTCGAAAA
TTTTGAACATTTGAAACGCGAAGCCTTGGTTGCCTTGGTGGCCAGCTCCC
CCGGGGAAGTGGCTCCGGCCTTAGCGGTTTTGGCCTACGACGGGAACATG
GCTTTCGGGACGCGATTGGAGGCGTTGGATTTGATGGTGCGAGGAGCTAG
GGAactgggcgggaaggagggcgggaaggagggtgggaaggagggcggga
aggagggcgggaaggagggcgggaaggaggttgggaaggagggcgggaag
gagggcggggaggagggtgcgaggggagaagagagggcgggcaccaGGCC
CCGCACGCAAGGAAAACGGCGGCTGGTGTCCGCGTCAGGGCAGGTCTTGA
CCTCAAGTAGCCGCCAAGAAACGCTGTTGCCCCAAGGAGACCCTGCGACA
GCCGTAGAGCCTGCCCCAAATCCCCGCCCGGacaaagcggaggaggtggg
ggggacCTCGGATCTGACCCGTCGGTGGGGCTACCGCCGgcgtccgcccc
cccgcaTGATTCGGAACCGGTTCGCCCCCGTGGCCGCCCCTGCGTTTTTT
GAACCTCTACTGGCGGCGATGATCGAGTCCTGCTcaccccgcccttcctc
agGCCCGacctcgcccccttcctccttcctgagcgtcgcctccccctcca
cctcccccccgtctcgccctccttccattgccctccacatcctccctccg
ctttccccgtcctccaccctccctccctcctccccctgccccacctTGTG
GGCCCGGGACTCGGACCaggccctcgccctctcccagaCCATCCATGCGC
TCGCCACCTTTGTCGACTGCGCCGGACCCTTTAATCCCGGCACCCCCCAA
CTGGCCGAGGCCCTGCTAACGGTCGCCTGGCCATTACGCACCAGCCGTTT
CCCGGAACTCCGTCGGGCGGTTTTGTTGGCCGTTGCCTGCGCCATGACCT
TTATGAACATGGAGTGGTTCgtcggagaagggagggggggagggcaggag
ggaggaaaagcattGCGGGCGATGATGGAATGGACGGCagcgacggggga
gggggacccGGACGAGGAATGCCGCAAGCTGGCTCGTACCttgagtgggg
ggggggggcacagtAAGGGTAAGGGGTTGGGCTTGTTAGCTTcgtga back to top
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