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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101251g1.4538.mrna |
| Orig protein id | gnl|cribi|Naga_101251g1.4538 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:172504..173795 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6650 ID=rna6650|Name=rna6650|organism=Nannochloropsis gaditana|type=mRNA|length=1251bp
ATGCTCACCAAGCACCCAAGTACCCTCCGCGCTCCTGTACCGACGCACAG
TTGTCGGACGGGTGGCACGCATGATATGAGGGCGATGTTCGTGCCCTTTA
CACGTCTGTCGCCTTTCCCCTTCATTTATCTCCTCGTAATGATGCTGGCC
TCCTCCACTGTGGTCAGCTCCCTTCGCCGTTCCTACAGCCTGGCCATGAC
TAGCACAGCCGCAGCGACTGGGACCTTGTTACTTCCCCAAAAATCTCACA
TGCGCTTTATGCCGGCTTTTGTTGCCCTCCCTCCCCTCTCCTTGGCCCCA
CTGCCCCTCCATGCATGCGGCAGCAAGATGGGCTCCGGCGTCCCCGACTT
CTGGCTCACGGGGGGAAGCCCGAAGGCGAGCAGCAGTTGTCAAAGTCGTC
CCCAGGCGCCTTCCTCGCGCCTTGCGGCGGTCGTTTCCAGAAGCACCAGC
CGGAGCAAGGCCACTTCCAGCATCGACAAGCGCACCGCGGGAGTGGGCGG
AGGAGACGGCATGGATACTGCGGGGGGGCGCGAATCTCCTTCCATCCCTT
TGTCCCCGGCGGAGAGCAGGCTCTTCAAAACCATGCTGGCCGTGGTGAAA
GACGAGAATCTTGGAACGACCTTGCGGGTGGCGGGGGGCTGGGTGCGGGA
CAAGGTGTTGGGGCACTGGAGTGCAGATGGCGAGGTAGATATTGACATTG
CCTTGGACAACTTGATGGGCTCTGACTTCGCCGCGATGCTGAACGGGTGG
CTGGCTAAGCGGGGGCGTCAAGTGTACAATGTGGGGATCATCAGCGCGAA
CCCGACGAAGAGCAAGCATTTGGAAACGGCGACCATGCGGGTGGGCTCCT
TTTCCATCGACTTTGTGAACCTGCGGACAGAGGCGTACACGGACGAGTCT
CGCATTCCATCCATGGGCATAGGAAGTCCAGAGGAGGATGCCATGAGGCG
TGACTTGACCATCAACGCCCTCTTCTACAACCTGCACACGGGCCAAATCG
AAGACTTCTGCGGACGGGGCCTTCGGGACATGCGGGAAGGCGTGATCCGG
ACCCCCCTCCCCGCCCTCACCACCCTCCTAGACGACCCCCTCCGCGTGCT
CCGGGCCGTGCGCTTCGCTTCCCGTCTGGCTTTTTCCATCAGCGACGAAC
TCGTCGTCGCCGCCTCGGACCCCCGGGTGCACGGGGCCTTGGCCCATAAA
GTCAGCCGGGAGCGGATCGGATCGGAGAAACGGTTTTTCCCGTCCCTTTG
A back to topprotein sequence of rna6650 >rna6650-protein ID=rna6650-protein|Name=rna6650|organism=Nannochloropsis gaditana|type=polypeptide|length=312bp
MTAELPLRYQPHQQDGSRTGLVGKKSKESNSTGHQIAGLADLGNAFLASF
IVPFAPSFLDRRLNAGFFYASDTPYWWALTLLSFWGGQWGARWVRWRLGM
TRPLSPRSKARVYGWLLILVLAVLGTGWVTRVEYLLGVRAWTGFASVLVW
GHAAERTTWGRKDGDRRGGGRCGWRRQHTGDPSSARVRVGEEMEAFLGPM
DALGWVVGASVGALTFSRRSWVTVGGYPAWASSVTAVVCVTLVSCLVLRR
MEKAGAWRRAGGRGDSKDGWMRSGRQERKDSGGPEVGRESFTPSVPSPGG
GTRRFQAGRPSP back to topmRNA from alignment at CM002469.1:172504..173795+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6650 ID=rna6650|Name=rna6650|organism=Nannochloropsis gaditana|type=mRNA|length=1292bp|location=Sequence derived from alignment at CM002469.1:172504..173795+ (Nannochloropsis gaditana)
GCGTGGTATACGAGTacccacctccccctgctACAAAGCCTGAGTTGAGC
GAGCGAGGCGAGAACGAGACGCGACACATTTGGTTAATATTTTTCTTTGC
GAGGTCCGTATTGCACGCCTCCACCATTGTGTTCCGTCGGCTGCTGATGC
TTACCACGCCTTTAATCGATCACTTCCCCTTCACAGCGAGGTCGCCCCAT
CAATGGACATTTTCCTGCCACGACGAGAAAAGGCACGACGCAttacctcc
cccctccaccggcaaCAACCAAGCGGGATCGTGACTTGCGGTCAACCACT
GCATCGAGAATGACACACTTCTCCCCTGTCTAAAACACTCCAAAATCTTA
CATATCATGACGGCAGAGCTGCCTCTCCGGTACCAGCCTCACCAACAGGA
CGGCTCGAGGACGGGACTTGTAGGAAAAAAATCCAAAGAGAGCAACTCGA
CGGGACATCAGATAGCTGGCCTGGCCGATCTGGGCAATGCCTTCCTTGCA
TCATTTATTGTCCCTTTCGCACCCTCCTTTCTGGATCGACGCCTGAATGC
GGGGTTTTTCTATGCCTCGGACACGCCATATTGGTGGGCCTTGACACTGC
TCAGCTTTTGGGGGGGACAATGGGGGGCTCGCTGGGTGAGGTGGAGGTTG
GGGATGACGCGCCCGCTTTCCCCACGATCGAAGGCCAGGGTGTATGGATG
GTTGTTGATCTTGGTGCTGGCGGTGCTAGGGACCGGCTGGGTGACTCGCG
TGGAGTATCTGCTGGGAGTGCGTGCGTGGACCGGCTTCGCTTCCGTGCTG
GTCTGGGGACACGCGGCAGAGAGGacgacgtgggggaggaaagacgggga
ccggcggggaggaggccggtGCGGATGGAGAAGACAGCATACGGGGGACC
CTTCCAGCGCCAGGGTCcgtgtgggggaggaaatggaagctTTTCTGGGC
CCAATGGACGCCTTAGGCTGGGTCGTTGGGGCGAGCGTCGGCGCGCTCAC
GTTCTCGAGGCGGTCCTGGGTGACGGTGGGCGGATACCCCGCCTGGGCAT
CCTCAGTGACGGCGGTCGTCTGCGTGACGTTGGTCTCGTGCCTGGTGCTC
CGCAGAATGGAGAAGGCcggggcgtggcggagggcgggagggagggggga
cagTAAGGATGGGTGGATGCGCTCTGGCAGGCAGGAGCGCAAGGACTCGG
GAGGGCCCGAAGTTGGGAGGGAGTCCTTCACGCCGTCCGTCCCGTCCCCA
GGGGGGGGAACTAGACGGTTCCAGGCcggccgtccctccccc back to topCoding sequence (CDS) from alignment at CM002469.1:172504..173795+ >rna6650 ID=rna6650|Name=rna6650|organism=Nannochloropsis gaditana|type=CDS|length=936bp|location=Sequence derived from alignment at CM002469.1:172504..173795+ (Nannochloropsis gaditana)
ATGACGGCAGAGCTGCCTCTCCGGTACCAGCCTCACCAACAGGACGGCTC
GAGGACGGGACTTGTAGGAAAAAAATCCAAAGAGAGCAACTCGACGGGAC
ATCAGATAGCTGGCCTGGCCGATCTGGGCAATGCCTTCCTTGCATCATTT
ATTGTCCCTTTCGCACCCTCCTTTCTGGATCGACGCCTGAATGCGGGGTT
TTTCTATGCCTCGGACACGCCATATTGGTGGGCCTTGACACTGCTCAGCT
TTTGGGGGGGACAATGGGGGGCTCGCTGGGTGAGGTGGAGGTTGGGGATG
ACGCGCCCGCTTTCCCCACGATCGAAGGCCAGGGTGTATGGATGGTTGTT
GATCTTGGTGCTGGCGGTGCTAGGGACCGGCTGGGTGACTCGCGTGGAGT
ATCTGCTGGGAGTGCGTGCGTGGACCGGCTTCGCTTCCGTGCTGGTCTGG
GGACACGCGGCAGAGAGGacgacgtgggggaggaaagacggggaccggcg
gggaggaggccggtGCGGATGGAGAAGACAGCATACGGGGGACCCTTCCA
GCGCCAGGGTCcgtgtgggggaggaaatggaagctTTTCTGGGCCCAATG
GACGCCTTAGGCTGGGTCGTTGGGGCGAGCGTCGGCGCGCTCACGTTCTC
GAGGCGGTCCTGGGTGACGGTGGGCGGATACCCCGCCTGGGCATCCTCAG
TGACGGCGGTCGTCTGCGTGACGTTGGTCTCGTGCCTGGTGCTCCGCAGA
ATGGAGAAGGCcggggcgtggcggagggcgggagggaggggggacagTAA
GGATGGGTGGATGCGCTCTGGCAGGCAGGAGCGCAAGGACTCGGGAGGGC
CCGAAGTTGGGAGGGAGTCCTTCACGCCGTCCGTCCCGTCCCCAGGGGGG
GGAACTAGACGGTTCCAGGCcggccgtccctccccc back to top
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