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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100063g23.3880.mrna |
| Orig protein id | gnl|cribi|Naga_100063g23.3880 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:136841..138809 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6635 ID=rna6635|Name=rna6635|organism=Nannochloropsis gaditana|type=mRNA|length=2033bp
CATGTTCCATCCTCTCATCCACCACAGTTGACCGCCATGATGCTGCGCGC
TCTTGCCAAGCGCCTCAATTGTACAGTCACTCGAGCAGAGGGCAATAGTC
TTGTCCATGCTGGTCGCAGCTTGAGCACTGCGGCGCCTTCATCTTTATCC
AAGTCATCGCCTCTCTCTCAACATGGGGGCGTCCATGGCACCCGAACGAC
GCAGAAAACATGGCGGAACAAACCTCTATTCCGTCGGGAGGGAGACGTCC
GCTTCCGGACAGGCACAGAGGCCGCAGAGATGCTCATCAACGAGGTCAAA
CGCCGGGACTCCCACGAAAAGGACTTTGTTCAAGTCTTTGAAAACGCCCT
CCAGACCCTGGCACCCGTGTTCGAGCGGATTCCCAAGTATGCTTTCGTGG
CCAAAGAATTCCTCGAACCAGAACGCATTTTCCAATTCCGTGTGTCTTGG
TTGGATGACTCAGGGAGCTACCGTATGAACCGAGGCTTCCGCGTGCAGTA
TTCCTCGGCACTGGGGCCCTTTGAGGGTGGATTGCATTTCCATAAGGACG
TGAACGCGGGTATGGTCAAGTCCATGGCGTTCGCCCGTGTCTTTACGAAC
GCCTTGACTGGATGTGAGATGGGCGCAGCCGTGGGCGGGGCAGATTTTAA
CCCGATGAACAAGAGCGAGGCAGAAATCCAGCGCTTTTGCCAGGCCTACA
TGACGGAGCTCTCCAAGTACATTGGGCCCGATCAAGACTTGCCGGGGGTG
GGGACTGGCGTGGGGGCGCGGGAAATTGGATACCTTTATGGTCAGTATAA
GCGGATGAGCATCCACCATGCTCAGAAAGGGAAAGGCTTGCTTTGGGGAG
GGGTATACCCGTTCCCACAGGCGACGGCCAGTGGGGTGGTGCATTGGGCT
GCCCGGGTGCTGGAAGGAAAGGGGGACTCGTTGGAAGGTAAGCGGTGCCT
GATCACCGGCTCGGGGAAAATGGCCTTGCACGTGGCGGAGAAACTTGTGG
AAATGGGGGCGGTCCCCCTCACGTTGAGCGACACGAGCGGGCACGTTTAC
GAGCCGGATGGGATCGACGCGGCGAAACTCAAGACGATCATGAAGATCAA
GTCGGAACGAGGCGCCCGGATCGGGCGGTACATCATCGCTTCCACCACGG
CCAAGTACAACGAACCGGAGAACGTCTTCAGCGTGCCCGCAGACCTGGTC
TTCCCATGCGCCACCCACAACGAGATCGACGGGGTCACCGCCACCATGCT
CGCGGACATGGGCGTGCAAGGCGTTTTTGAAGGTTCCCACATGCCCTGTA
CCAACCAAGCGATCAGTATTTTCAAAAAGAGGGGAATATTGCACGGCGGG
CACGTGGCCACCTTGGCGGCGGACTCGATTTTCAACGGCTTGGAGCTTTC
CAAGAGCTCGCCGTCCATGCACGACCTGGACGGGCGGATCAAGGAGGCGG
TGGACTCGATCTACCTGGAGGCCAAGGCCACGGCCAAGGAGTTTAACGTT
CGGGGCGACATGCACGCAGGTGCGATCATGGCGGGCTTCTTGCGGGTGGC
GGACACCATCATTTGCCATGGCGCTGTGTAGGAAGAGGGAGGAATGCCGG
GGAGTGATGGAGAGTAGAGGAAGTCTTTGGGGGAGGGAGAGGGGGTTATA
GGAGGGTTGGGTAGCGGTGACTGATGCATGTCTGCTTGCAATAGCACGTC
TTTATCATTTGAGAGACTCGGAAGGGAAGGAAAGAGCCCATCTGCGGAAT
GAGGAGGAGTTAGAGGGTTAGGGTGGCGAGGAGGGAAGGCTTTGCAGTAG
AGCGGGGAGGAGGGATGGAGGTGATCCTGGTGAAGGAAGGGGCGCGTAAA
GGCCCTTTAGGACGCCCCAAAATATGCTGCAAGGGAAAGAAGACAGTCCA
CGGTAGGAAAGGAGAAAGAGGACAGACGCAAAAGCAAAAGAGGAGAAGGA
CCGTGCATGGGCACAAAATGGAATCAGAATCCTCCAGACCTGCTGTAGCG
AGGCCTGCCAGGATGGAAGTAGTGGTAGTTATT back to topprotein sequence of rna6635 >rna6635-protein ID=rna6635-protein|Name=rna6635|organism=Nannochloropsis gaditana|type=polypeptide|length=423bp
MLPRAVTGLLAVLLSLPAASFLQLPLRPRIVRRHFDSAAAPPNVLEIPPA
SDQACRPILRRFTRRVTFRAWHLIWRHRFPFFLPAWVDARLEKRWVDGQE
DWLQDLHILARETEDREEEEQKEEEEEEGNEGGHRIWSVTGPSRYLAPLD
HAEASSTSPSSTMSSFVPLSLRQAPVPRPRRLGQTVRRLRSTLRSMLRPS
LLFGVERTRVGLSTRGDGDIQEWHLYGLRCREGTVQKEGRVESAAEKEST
GRTTKRRAERRGEQNILLGKMGIKVKLPGIGGPSAVYDAGRALFGEGGKE
GAEGGPLPVVVLVWCFVPVEFRGRGIGRVMIDMVEEAVVGRGRKEGEEDG
GAGWEEQEPKDALTPPLEAKGKGRRRGYVMLTVDDNGSGRLWQYYHALGF
RIAPSLSSDDCQIMLRPIECWKR back to topmRNA from alignment at CM002469.1:136841..138809+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6635 ID=rna6635|Name=rna6635|organism=Nannochloropsis gaditana|type=mRNA|length=1969bp|location=Sequence derived from alignment at CM002469.1:136841..138809+ (Nannochloropsis gaditana)
ATGGGCAATCCCTATCGCTATCCGACAACCTGACTTAAGAGGTCGGAGCT
GGGTGTGGACACATTATTCATTAATTGGTGACAAAAttggcggcgacggc
agcgaggagggagtacCCGGCGCCTTGAGTCTGATAACTTGCTGCAGACA
GGCGATCGCAGATTTCAAAATGAAATTCAGGACTTGTCACGCGTAGAGAT
TCCAAACGAAGTGTCTAAAAGTGCTCCTGGGTATTTTGTCATTGTCGTCA
TGATGCGAATCGTGGTGGTAGCATTTAGGGAACACAGCTCTAACCCCCCA
AATGACAGCCCTATCAATTTTCATGACGAGAATCAAGCTGGTGCGAATGC
CGTTCTCATCGATAAGACTTTTCATCCTTAAATCATACAGGATGGTATGA
CAGTCATCGTAATTCATTCCCATTGGTTTTAAGACTTCCTGGAATCTCAT
CGATTTCTCTCAGATAACGCGCCAGTATGCTCCCGCGTGCCGTCACCGGG
CTGTTGGCCGTGCTCCTGTCTCTCCCCGCCGCTTCATTCCTTCaactccc
tctccgcccccgtaTCGTTCGTCGTCATTTTGACTCGGCTGCTGCGCCCC
CCAATGTCCTCGAGattcctcctgcttccgaCCAGGCCTGTCGCCCGATC
CTTCGCCGCTTCACCCGTCGAGTCACCTTCCGCGCATGGCACCTCATTTG
GCGGCaccgctttcctttcttcctacCAGCCTGGGTAGATGCCCGGTTGG
AGAAACGTTGGGTcgacgggcaggaggacTGGCTCCAAGACTTGCACATT
CTAGCGAGGGAGAcagaagacagggaggaggaagagcagaaggaggagga
ggaggaggaagggaacgagggcggTCATCGCATCTGGTCGGTGACGGGCC
CCTCCCGCTACCTGGCTCCCTTAGACCATGCAGAGGCTTCGTccacttct
ccttcgtccaccatgtcctccttcgttcctctctccctccgccaagCCCC
CGTTCCGCGTCCCCGACGGCTTGGGCAGACGGTCAGGAGGCTTCGATCCA
CGCTAAGATCCAtgctccgcccttccctgcttttcGGGGTGGAAAGGACG
CGGGTAGGGCTGTCGACGCGTGGAGACGGGGACATTCAAGAGTGGCACCT
CTACGGTCTTCGGTGCCGGGAGGGGACAGtgcaaaaggaggggagggtgg
aatcGGCAGCAGAAAAGgagagcacggggaggactACAAAAAGACGtgcg
gaaagaaggggggagcaaAACATACTATTGGGCAAAATGGGGATCAAAGT
GAAACTTCCGGGGATAGGAGGACCCTCGGCTGTATATGACGCCGGTCGAG
CGTTGTTtggcgaaggggggaaggaaggggcggagggagggccgttGCCT
GTGGTGGTATTGGTCTGGTGTTTCGTACCGGTGGAGTTCCGAGGTCGCGG
CATTGGCCGCGTCATGATAgacatggtggaggaggccgtggtaggcaggg
gaaggaaggagggggaggaggatggcggggcggggtgggaggaacaGGAG
CCTAAAGATGCGCTTACCCCCCCCTTGGAAgcaaaagggaaggggagaag
aagggggtaTGTGATGTTGACGGTGGATGACAATGGAAGTGGCCGGTTGT
GGCAGTATTACCACGCGCTTGGATTTCGAATTGCACCTTCCTTAAGCAGC
GACGACTGCCAGATCATGCTTCGACCGATCGAATGTTGGAAGAGATGACA
CGATGAAAATCCAGTTGTATCATAAAAAATCTCAAATAAGAATGCGAGTG
AGACTCGACAAAGTAGAACACGCAGGAAAGGGAATACTGGCAGGGCAGGA
AACGACGGGATCGCGCTTGCACagggcccttctccttccttccctcctct
ctcgatCAACAGCAATGCTCATTCCTTGCGTCTTTCAAATGAGTGGGTCT
TCCTGGACAGCTCTCCATC back to topCoding sequence (CDS) from alignment at CM002469.1:136841..138809+ >rna6635 ID=rna6635|Name=rna6635|organism=Nannochloropsis gaditana|type=CDS|length=1272bp|location=Sequence derived from alignment at CM002469.1:136841..138809+ (Nannochloropsis gaditana)
ATGCTCCCGCGTGCCGTCACCGGGCTGTTGGCCGTGCTCCTGTCTCTCCC
CGCCGCTTCATTCCTTCaactccctctccgcccccgtaTCGTTCGTCGTC
ATTTTGACTCGGCTGCTGCGCCCCCCAATGTCCTCGAGattcctcctgct
tccgaCCAGGCCTGTCGCCCGATCCTTCGCCGCTTCACCCGTCGAGTCAC
CTTCCGCGCATGGCACCTCATTTGGCGGCaccgctttcctttcttcctac
CAGCCTGGGTAGATGCCCGGTTGGAGAAACGTTGGGTcgacgggcaggag
gacTGGCTCCAAGACTTGCACATTCTAGCGAGGGAGAcagaagacaggga
ggaggaagagcagaaggaggaggaggaggaggaagggaacgagggcggTC
ATCGCATCTGGTCGGTGACGGGCCCCTCCCGCTACCTGGCTCCCTTAGAC
CATGCAGAGGCTTCGTccacttctccttcgtccaccatgtcctccttcgt
tcctctctccctccgccaagCCCCCGTTCCGCGTCCCCGACGGCTTGGGC
AGACGGTCAGGAGGCTTCGATCCACGCTAAGATCCAtgctccgcccttcc
ctgcttttcGGGGTGGAAAGGACGCGGGTAGGGCTGTCGACGCGTGGAGA
CGGGGACATTCAAGAGTGGCACCTCTACGGTCTTCGGTGCCGGGAGGGGA
CAGtgcaaaaggaggggagggtggaatcGGCAGCAGAAAAGgagagcacg
gggaggactACAAAAAGACGtgcggaaagaaggggggagcaaAACATACT
ATTGGGCAAAATGGGGATCAAAGTGAAACTTCCGGGGATAGGAGGACCCT
CGGCTGTATATGACGCCGGTCGAGCGTTGTTtggcgaaggggggaaggaa
ggggcggagggagggccgttGCCTGTGGTGGTATTGGTCTGGTGTTTCGT
ACCGGTGGAGTTCCGAGGTCGCGGCATTGGCCGCGTCATGATAgacatgg
tggaggaggccgtggtaggcaggggaaggaaggagggggaggaggatggc
ggggcggggtgggaggaacaGGAGCCTAAAGATGCGCTTACCCCCCCCTT
GGAAgcaaaagggaaggggagaagaagggggtaTGTGATGTTGACGGTGG
ATGACAATGGAAGTGGCCGGTTGTGGCAGTATTACCACGCGCTTGGATTT
CGAATTGCACCTTCCTTAAGCAGCGACGACTGCCAGATCATGCTTCGACC
GATCGAATGTTGGAAGAGATGA back to top
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