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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100063g10.3881.mrna |
| Orig protein id | gnl|cribi|Naga_100063g10.3881 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:98065..101284 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6621 ID=rna6621|Name=rna6621|organism=Nannochloropsis gaditana|type=mRNA|length=1613bp
CCTCACTTCCTGAGGCATGTTCCTCACGATTCGAATTTTAATATGTTCGT
AAAGCCATGGGGGCTTTCTTGACAGACAATGCTCCCCTAGCCGAGGCTCA
ACGCATTCGTGGAAGTGTTAGTACGGAGAAAGCTGATGCTATCCCGGCGG
CAGGCCCTGCCGTCCCCGTCCAGGACGCAGCTCCCTCAAGTGCTGATTTA
TCCACCACCGTGAATGAGGACGGGGTTCCTAAAACGAAAGTCCGCGTAAA
CATCCGACGCAAAGACGCCTCAAAAGAAGCACAGAACGGATTGCAAGAAG
AAGGGCATCAAACACACCACGTGCTTGAATCGCATGACTCTCAAGGAATA
TTTGCTTGAATATGGAGAGGAAGGAAGGCGGGGAAGGAAGAACCAGAAGA
GTCCTGGCGCAGCATCTATAGCAGCCACGGACAAGGCGGGCGCAAGAACC
ACGACACCGGCGATGAAAACTCATACAACGCAGTCCTTGTCGAGCATGCC
TTCCCCCAATAAGGTCGAGTCCCCGGTGGATTCGACTAGAGAGGGAGCTG
CGACGGAAGGAACAGAGCTGTCACCCGTTCCCTCCGAGTCCGCCCCCACA
AAGAATGGATTGGCCGGCATGGCGGACGAGACCAAACACAACGTGCAGGA
AGTCACCAAGCGAATTCGGAAAAGGGCGGCGGAACCAGGCCGAGAACGGG
GGGACATTGACCCAGCAGATTTGGAGGAGATCCGGGCACGGGCCGTGGGG
GACGAGGACGAGGAGGGCGTGGAGGCGGAAGACGCGGCAGCCCAGGTCCC
AGGAAACGCAGTGGAGGAGGTCAGGCCGGAATGCCCGGGTGGAATGGTTT
ACAGCGACTGCGGTCGCCCCTGCACCGCCACCTGCGAGCATCTAAGACCG
GTGTGTCCGGCGGTGTGTGTCGCGCGCTGTCACTGCCCACACGACAAGCC
GATTTGGGACGGAGAAAATTGTCTGGAGGAGGCACAGTGTCGCCTCAAAG
CAAAGGCGGATGGAAACCAGGAAGACGGGGCAAATAAGATGTCGGGCAAA
GCACTGCGTGGAGCGAGAGTGGGGTAGTGGCCGTGGAACCGTAAGTTTTT
GCGTCGGAAGAAGACAAATCGTTGCGGCATAATGGTGGTCAGTGCCCGTC
ATCTTTATGAAAAATATGGTTGTCTCGAGCGAGCTATAAATATCCAATAT
TCCCATGGAATGGGGTACAACAGAGACAACGAAATGGACGAAGCTGGGAA
TGCGAAGGAACCAATCCATGAGTAACAGCGAAAAATAGATGAAAGATGTA
TAAAACGTTTGGCAGGGAATGCAAAGATATTGTACAGGCAAACATCATGA
AAAAGGGCTACAAAGCATAGGAATACTTTTGATTCGTCGGAGAGAGGTAG
GCGAGTTTGAAAGATTGGATTGAGATGTTATCTCTAAGGTCAAGAGCTCT
TGAGGGCTCGTACTTCAGAGTACTCATAGCTTGATCAGAGTGGGGAATCA
GTTGAGTGCCTCCTTCCACCTTTCACAAACCAATTGCAAAAGTAGATAGA
AGCGAAGTTAAAAAGAAATCAGCACTCGGCACACACGCATGCGCTCCTAC
CAATGGCTACCAA back to topprotein sequence of rna6621 >rna6621-protein ID=rna6621-protein|Name=rna6621|organism=Nannochloropsis gaditana|type=polypeptide|length=596bp
MRIFRLVLTLSLAATVFAEDTVSTTNTEAVAGAIQGAVSDSGVTTPPISP
EMRDAATDVIKKVSDGAAVSEMVNETDAQAPAIQIVNDSEEKAPAIPPEM
KDAAGQVIKEVANSEAVKGAVKESGLETPNISPEMKDAAGNVIKQVANSD
AAKQNGASDLLNTVAGQVDSGAASSTGKASTSANPGMDLLTNAAQASNNP
TLQAASSIGSMAKQAGVIPTNSIDRAKAANPELGALINGLQSTASIANSM
SQCYASIEGDEDAISKSLLSLGTSMVSSDSITAASEVGKALIMASPAAST
SQKNAMYQLFRIYLDQNANTGKALTTAQEKAYSSLTTECNAAFDDVVTTY
QDSKGTISSIMAGGNSNVTCANFQDNSTSVDMTLCVWPTAIWTLGDKMMA
NVSATFTNYGVGLCDVKFYIINLADAVGLKPAWLPDAKEAFPQGIPQGAE
IAIEAAVPWTNEIAENKPVVDILKGWSACPNGPATPPPVVQPTTKPKVDN
GVLSSASACFITPACTAAIAPFGDDSCGAYSQLLTSGCSTCSTEILEAAG
KSCLTTCSSQYCGTASDKEEATSGAGALSKAVAFVVTLTAAFAFAL back to topmRNA from alignment at CM002469.1:98065..101284- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6621 ID=rna6621|Name=rna6621|organism=Nannochloropsis gaditana|type=mRNA|length=3220bp|location=Sequence derived from alignment at CM002469.1:98065..101284- (Nannochloropsis gaditana)
AAAGACCAGCTTTGTCTCGTGGGCCACAAACTTTGTATCGATCCTTTCTT
TCTATTGCTCCACACGATCTTTCTGGTGCTCGCCCAGTGTGCATACGTTG
GAAGCAAACTTCTGATCTCATGTGCATATGCAAATTTTCCAGGATAATGC
TTGTTCCGCACCTTTTATTGCACCACACCTGAAACGCAACTACACTCAAG
TACTATTACAGCACAGTTAAATACTTACCCTGCCTTGCCTTCCTCAACTA
CCCGCACACAGACAAAGAGAACCTCATCGTTCCCCCGTCAACTTTTCAAA
CAAATAAACCATGCGCATTTTCCGTCTGGTCCTTACCCTGTCCTTGGCTG
CGACGGTCTTCGCAGAGGACACCGTCTCTACTACAAACACCGAAGCCGTC
GCTGGGGCCATCCAGGGAGCTGTCTCTGACAGCGGTGTTACCACCCCGCC
CATCTCTCCGGAGATGAGGGATGCTGCCACAGACGTGATTAAGAAAGTGA
GCGACGGCGCGGCGGTGAGTGAGATGGTGAACGAAACGGACGCACAAGCT
CCCGCTATTCAGATCGTGAATGACTCCGAAGAAAAGGCTCCTGCCATCCC
TCCTGAGATGAAAGATGCTGCCGGCCAGGTTATCAAAGAAGTAGCCAACA
GCGAGGCGGTGAAAGGTGCTGTGAAGGAGAGCGGATTGGAGACTCCCAAC
ATTTCCCCCGAAATGAAAGACGCAGCCGGGAACGTGATCAAGCAGGTGGC
CAACAGCGATGCCGCCAAACAGAACGGGGTAAGAGTCTCTGAAGCAAGAG
AAAATGAGAAGGCCTAAGGATAGGGACATTGGACTAGAAGTTGCCCATCA
TTCACTCATAATCATCCGTGGGCTCTTACTTACCACACCAATGCAGGCGT
CAGACCTACTGAACACCGTCGCAGGACAGGTTGATTCCGGCGCCGCCTCG
AGCACAGGCAAGGCATCGACGAGCGCCAATCCCGGGATGGATCTGTTGAC
GAATGCTGCCCAGGCGTCCAACAACCCAACATTGCAGGCTGCGAGCTCGA
TCGGAAGTATGGCGAAGCAGGCGGGCGTCATCCCCACCAACAGCATTGAC
CGAGCGAAAGCCGCCAACCCGGAGCTCGGTGCGTTGATCAATGGCCTCCA
AAGCACTGCTAGCATTGCCAATAGCATGAGCCAGTGCTACGCCTCCATCG
AAGGAGACGAGGACGCCATCAGCAAGTCCCTCCTCTCCTTGGGCACGAGC
ATGGTCAGCTCTGACTCGATCACCGCGGCCTCGGAGGTGGGTAAGGCCTT
GATCATGGCGTCGCCAGCCGCTAGCACGTCGCAAAAGAACGCCATGTACC
AGCTCTTCCGGATTTACTTGGACCAAAATGCCAACACGGGCAAGGCGTTG
ACCACGGCCCAGGAGAAGGCTTACTCGTCCTTGACCACCGAGTGTAACGC
CGCTTTCGACGACGTCGTCACGACCTACCAGGACAGCAAGGGCACCATTT
CCTCAATCATGGCGGGTGGAAATTCCAACGTGACCTGCGCCAATTTCCAG
GACAACTCCACCTCCGTCGATATGACCCTGTGCGTGTGGCCCACGGCCAT
TTGGACTCTTGGGGACAAGATGATGGCGAATGTGAGTGCGACCTTCACCA
ACTATGGCGTAGGCCTCTGCGACGTCAAGTTCTACATCATCAATCTGGCA
GACGCCGTGGGACTCAAGCCCGCCTGGCTGCCGGATGCGAAGGAGGCGTT
CCCCCAAGGCATTCCTCAGGGGGCCGAGATCGCGATTGAGGCAGCCGTGC
CCTGGACCAACGAGATTGCGGAGAACAAGCCAGTCGTCGACATTCTGAAG
GGATGGTCGGCGTGCCCTAACGGCCCCGCTACGCCTCCCCCTGTCGTCCA
ACCGACAACGAAGCCTAAAGTGGACAATGGCGTGCTTAGCTCGGCGTCGG
CATGCTTCATTACCCCTGCTTGTACCGCAGCCATCGCTCCTTTTGGAGAT
GACTCGTGCGGGGCGTACTCACAGCTTTTGACTTCCGGATGCTCCACTTG
CTCCACTGAGATTTTGGAAGCGGCCGGCAAATCTTGCTTGACGACCTGCT
CCAGCCAGTACTGTGGCACAGCCAGCGACAAGGAGGAAGCTACCAGCGGA
GCCGGCGCTCTTTCCAAGGCCGTCGCCTTTGTGGTCACTCTGACAGCTGC
CTTTGCCTTTGCGCTTTAGGTTCCTCCTGGGGGGCGAAGGGAGGCGGAGA
GGTGGAAAAATGATAATACAGGGCAGGAGGATGGTGGAAGTGGGAAAAAA
ATCCGTCATTGGAATAACATCTCTTGTAAGATTTTGAATCATTGCAAAGA
TGGCGGAAAAACTATGCATGTAATTTGGGCGGAGGAAATGCATACGTATG
GAAAGGAAGTTGTTTTCTTTCACACAGGAGAATCAGAACTACAAATGTGA
GGCCTGAAATGAAAAAAGTGAGGGGGGAGCGTAATAGAACTCGTCTGTGC
AAGACTGATGTGAATCTACAGGAAAATGAAGCGCGCGAGCGGCTTTACGC
GCCATATCACCACGGTCTCTTTTGTTTAGCCAGTATATTTTTCTTCCAAG
CACTTTGTAGAGTACTCGAAAAGGAACGAAAAAAAGAGAATGAAAGAGAC
AGGGATAGGAGGCAACAGATACAATTGGCTGATCGAGACAAGATGAGGAT
TAAAAGAGGGTCCTGTGTCGGCTGCATTAAAAGATTCTGGTTTGAAAGTT
GAGGATGAATAAATCGAGATCATGCCATACCATGTTCCTTTTTTGGGATT
CTCTCAGGGCTTTTTCTTCATTTTGAATCACGAGCCTGAGACAGCGACAC
AAAGCAAAGGAGTTGAAGGAAACGCGGCAAACGACGGTGTTCTGGGACAG
CAAAATGCAACCGAGAAAGAAAAGTGAAGAAAAGTAAGAGACGAAAGTAG
AGACTGTTTCCCTTGCAAAGCACTTGCTAAACCCGTGGAAAGAAAAATTG
TACACGTTTTAGGGGGAATTATGTGTCTGTATTGGTTTATTTTGAAGCTT
CCTAGAGTATGCTGGAGTGCCATACCTTCTTGTAAAGTGCTTCGCTTAAA
TAGCATGATTATGCACATAGAAATGGACAAGGAGATCGTTGTACGATTAT
AAAATTCAAATCGAGACACCAATCGGCGCCACACGCTGAGTCTGCAAGTT
TCTTTCATTTCGGCAATACC back to topCoding sequence (CDS) from alignment at CM002469.1:98065..101284- >rna6621 ID=rna6621|Name=rna6621|organism=Nannochloropsis gaditana|type=CDS|length=3582bp|location=Sequence derived from alignment at CM002469.1:98065..101284- (Nannochloropsis gaditana)
GCGTCAGACCTACTGAACACCGTCGCAGGACAGGTTGATTCCGGCGCCGC
CTCGAGCACAGGCAAGGCATCGACGAGCGCCAATCCCGGGATGGATCTGT
TGACGAATGCTGCCCAGGCGTCCAACAACCCAACATTGCAGGCTGCGAGC
TCGATCGGAAGTATGGCGAAGCAGGCGGGCGTCATCCCCACCAACAGCAT
TGACCGAGCGAAAGCCGCCAACCCGGAGCTCGGTGCGTTGATCAATGGCC
TCCAAAGCACTGCTAGCATTGCCAATAGCATGAGCCAGTGCTACGCCTCC
ATCGAAGGAGACGAGGACGCCATCAGCAAGTCCCTCCTCTCCTTGGGCAC
GAGCATGGTCAGCTCTGACTCGATCACCGCGGCCTCGGAGGTGGGTAAGG
CCTTGATCATGGCGTCGCCAGCCGCTAGCACGTCGCAAAAGAACGCCATG
TACCAGCTCTTCCGGATTTACTTGGACCAAAATGCCAACACGGGCAAGGC
GTTGACCACGGCCCAGGAGAAGGCTTACTCGTCCTTGACCACCGAGTGTA
ACGCCGCTTTCGACGACGTCGTCACGACCTACCAGGACAGCAAGGGCACC
ATTTCCTCAATCATGGCGGGTGGAAATTCCAACGTGACCTGCGCCAATTT
CCAGGACAACTCCACCTCCGTCGATATGACCCTGTGCGTGTGGCCCACGG
CCATTTGGACTCTTGGGGACAAGATGATGGCGAATGTGAGTGCGACCTTC
ACCAACTATGGCGTAGGCCTCTGCGACGTCAAGTTCTACATCATCAATCT
GGCAGACGCCGTGGGACTCAAGCCCGCCTGGCTGCCGGATGCGAAGGAGG
CGTTCCCCCAAGGCATTCCTCAGGGGGCCGAGATCGCGATTGAGGCAGCC
GTGCCCTGGACCAACGAGATTGCGGAGAACAAGCCAGTCGTCGACATTCT
GAAGGGATGGTCGGCGTGCCCTAACGGCCCCGCTACGCCTCCCCCTGTCG
TCCAACCGACAACGAAGCCTAAAGTGGACAATGGCGTGCTTAGCTCGGCG
TCGGCATGCTTCATTACCCCTGCTTGTACCGCAGCCATCGCTCCTTTTGG
AGATGACTCGTGCGGGGCGTACTCACAGCTTTTGACTTCCGGATGCTCCA
CTTGCTCCACTGAGATTTTGGAAGCGGCCGGCAAATCTTGCTTGACGACC
TGCTCCAGCCAGTACTGTGGCACAGCCAGCGACAAGGAGGAAGCTACCAG
CGGAGCCGGCGCTCTTTCCAAGGCCGTCGCCTTTGTGGTCACTCTGACAG
CTGCCTTTGCCTTTGCGCTTTAGATGCGCATTTTCCGTCTGGTCCTTACC
CTGTCCTTGGCTGCGACGGTCTTCGCAGAGGACACCGTCTCTACTACAAA
CACCGAAGCCGTCGCTGGGGCCATCCAGGGAGCTGTCTCTGACAGCGGTG
TTACCACCCCGCCCATCTCTCCGGAGATGAGGGATGCTGCCACAGACGTG
ATTAAGAAAGTGAGCGACGGCGCGGCGGTGAGTGAGATGGTGAACGAAAC
GGACGCACAAGCTCCCGCTATTCAGATCGTGAATGACTCCGAAGAAAAGG
CTCCTGCCATCCCTCCTGAGATGAAAGATGCTGCCGGCCAGGTTATCAAA
GAAGTAGCCAACAGCGAGGCGGTGAAAGGTGCTGTGAAGGAGAGCGGATT
GGAGACTCCCAACATTTCCCCCGAAATGAAAGACGCAGCCGGGAACGTGA
TCAAGCAGGTGGCCAACAGCGATGCCGCCAAACAGAACGGGGCGTCAGAC
CTACTGAACACCGTCGCAGGACAGGTTGATTCCGGCGCCGCCTCGAGCAC
AGGCAAGGCATCGACGAGCGCCAATCCCGGGATGGATCTGTTGACGAATG
CTGCCCAGGCGTCCAACAACCCAACATTGCAGGCTGCGAGCTCGATCGGA
AGTATGGCGAAGCAGGCGGGCGTCATCCCCACCAACAGCATTGACCGAGC
GAAAGCCGCCAACCCGGAGCTCGGTGCGTTGATCAATGGCCTCCAAAGCA
CTGCTAGCATTGCCAATAGCATGAGCCAGTGCTACGCCTCCATCGAAGGA
GACGAGGACGCCATCAGCAAGTCCCTCCTCTCCTTGGGCACGAGCATGGT
CAGCTCTGACTCGATCACCGCGGCCTCGGAGGTGGGTAAGGCCTTGATCA
TGGCGTCGCCAGCCGCTAGCACGTCGCAAAAGAACGCCATGTACCAGCTC
TTCCGGATTTACTTGGACCAAAATGCCAACACGGGCAAGGCGTTGACCAC
GGCCCAGGAGAAGGCTTACTCGTCCTTGACCACCGAGTGTAACGCCGCTT
TCGACGACGTCGTCACGACCTACCAGGACAGCAAGGGCACCATTTCCTCA
ATCATGGCGGGTGGAAATTCCAACGTGACCTGCGCCAATTTCCAGGACAA
CTCCACCTCCGTCGATATGACCCTGTGCGTGTGGCCCACGGCCATTTGGA
CTCTTGGGGACAAGATGATGGCGAATGTGAGTGCGACCTTCACCAACTAT
GGCGTAGGCCTCTGCGACGTCAAGTTCTACATCATCAATCTGGCAGACGC
CGTGGGACTCAAGCCCGCCTGGCTGCCGGATGCGAAGGAGGCGTTCCCCC
AAGGCATTCCTCAGGGGGCCGAGATCGCGATTGAGGCAGCCGTGCCCTGG
ACCAACGAGATTGCGGAGAACAAGCCAGTCGTCGACATTCTGAAGGGATG
GTCGGCGTGCCCTAACGGCCCCGCTACGCCTCCCCCTGTCGTCCAACCGA
CAACGAAGCCTAAAGTGGACAATGGCGTGCTTAGCTCGGCGTCGGCATGC
TTCATTACCCCTGCTTGTACCGCAGCCATCGCTCCTTTTGGAGATGACTC
GTGCGGGGCGTACTCACAGCTTTTGACTTCCGGATGCTCCACTTGCTCCA
CTGAGATTTTGGAAGCGGCCGGCAAATCTTGCTTGACGACCTGCTCCAGC
CAGTACTGTGGCACAGCCAGCGACAAGGAGGAAGCTACCAGCGGAGCCGG
CGCTCTTTCCAAGGCCGTCGCCTTTGTGGTCACTCTGACAGCTGCCTTTG
CCTTTGCGCTTTAGATGCGCATTTTCCGTCTGGTCCTTACCCTGTCCTTG
GCTGCGACGGTCTTCGCAGAGGACACCGTCTCTACTACAAACACCGAAGC
CGTCGCTGGGGCCATCCAGGGAGCTGTCTCTGACAGCGGTGTTACCACCC
CGCCCATCTCTCCGGAGATGAGGGATGCTGCCACAGACGTGATTAAGAAA
GTGAGCGACGGCGCGGCGGTGAGTGAGATGGTGAACGAAACGGACGCACA
AGCTCCCGCTATTCAGATCGTGAATGACTCCGAAGAAAAGGCTCCTGCCA
TCCCTCCTGAGATGAAAGATGCTGCCGGCCAGGTTATCAAAGAAGTAGCC
AACAGCGAGGCGGTGAAAGGTGCTGTGAAGGAGAGCGGATTGGAGACTCC
CAACATTTCCCCCGAAATGAAAGACGCAGCCGGGAACGTGATCAAGCAGG
TGGCCAACAGCGATGCCGCCAAACAGAACGGG back to top
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