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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101499g1.9577.mrna |
| Orig protein id | gnl|cribi|Naga_101499g1.9577 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:46493..48293 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6602 ID=rna6602|Name=rna6602|organism=Nannochloropsis gaditana|type=mRNA|length=1521bp
GTTTGACCTGCCGGCAAAAAGCTCTCCATCATGGCACGTCGCACGCGCCG
CTTCCCTTGCTTATGTTTCATCGATTGGGAGTTCTAGAGGCTTTGAATTT
GGGTGGTGGCGTGCTGGAGGGATTGACGGCAAAAACATGGCCCGATGGAC
GCAGGCCAGCCATGATTGCATTTTTACAGAGAAAGGGCAAACCGGGTTTT
GCTGAAATCGCCTCGTTTGTTATGAGTGCATGGGGTGCGGTCAAGATATG
CTAGGGAAGACTATCACTCCCCTCGGAGCCTCATTTTTTGCGAGGAGCCC
CCCCCGGGTTTCGTAGGGGGTGCCCGGCTTCGGAAGTGACGCCTAGAAGA
CAGGACGGGGTCATTGGCTTTAGGCATGTCAGACTTCTGCCACGTCGCTA
CCATTTCTTGAACACTCAGACTCTGTTCCTGTCGCGCCCATTTACTCGTT
AATAGGTGGGTAGGTAGGCACCTCCAAGCTTACTACCCAAGCCTGAGCAT
CTGTGAAGGCAAGCACGTGGCGCTTCCCTTCCCTGATAGTCTGTAGAGAA
AGTCACGACACCCCCACGCTCCGGGCTATCTTCCACACCGAGGTTGTCAA
CCATTGCTCGGCCCTATTTATGAGCGTGACAGCTGCGACGTGGCCGGAGA
GTGGCATGACCAGTAGCCACGTGAACAGTTGCAGTACCAGCAGTGTGAAC
AGCAGCAGCAGTGGGAGCAGCGGTGGCCACACCACGTCAAGCGCAGGCGC
AGGGAGTGACGCGTACGAAAAGCCTCCTTTGCTCGGACCGGGGTCATCCC
ACGCCACCGCTTGCTCGCCCCTCTCCTCTCATTCCACCACCGCCTCGGCT
CCTCCCCCCGAGACCTCCTCCCCGCCCTCCTCCCTGCCTTCCCCCCAGCT
GCGAAGCGGGGTTCCGTCGCTCATGTCCCACGGCCATCGTGGCTTGAGCC
CTCCGCATCGCGGTAACATCCACCATGCCTCCCTCCCCAGCGGGCCCCAG
GACTACCACGACGCCCGGGCCTATATGCCTGCGGCTTCGTCCTGTACCTC
GCCCTCCTCCTCCACCTCCACCAACACCTCCTCCCCAGGGTCCTCGGCGA
TGGCGGGCCGTCCCCCCCATCCCCCTGGCCGCCCGGCCCCTCTCTCCGCC
GGCCCGAGCACGGCCATGCCCCTTCCCCCCCCGCCCGGGGCAGAGGTGAT
GGAAGACATTTATGTGGTGGCGGATAGTGCCAATCTCTTCAGCGGGGCGC
AAATGGTGGACGGAAAGCGAAACATGGACATTAAGGTCAACCTGGCCAAG
ACGCTTCCCTTGATCGATGACGCGCGGCCCATCAAGCACCGAATTGTGGT
AGCCTCCTTCCCGGAACGCAGCAACCGCATGTGGCGATACTTCGAGCAAC
GCCGGTACCAAATTTATGTCAAGAGCGAGGAAACCGACGTGGACGACGAA
TTGGCGGCGCAGATTTGTGCGATTCTTACCCATGTCCCGGAGGGGAAGAA
TACCCGGGTGTTGGTCTTTGT back to topprotein sequence of rna6602 >rna6602-protein ID=rna6602-protein|Name=rna6602|organism=Nannochloropsis gaditana|type=polypeptide|length=231bp
YEVGGEGGYGGGEVDGGRGGGGGDGLWTLDNLTNGVDMLSLEREGRTPGG
KEGGRQAAASALAPPALWMEGGPESSLGGGYAYGLGGGEHARTAARLLEL
SRHGACGRVFGLPELPFFSFFPPSSPFPAHVDRAALCRFLRRHLPRPFLP
LLLLLHLFGPGALVLRHGHSLLRRDQQTSPLDQKLALPPVLPPFLGRVLV
GGLGGERGGGREGGRAGGRGLGAEREVGEGG back to topmRNA from alignment at CM002469.1:46493..48293+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6602 ID=rna6602|Name=rna6602|organism=Nannochloropsis gaditana|type=mRNA|length=1801bp|location=Sequence derived from alignment at CM002469.1:46493..48293+ (Nannochloropsis gaditana)
TACGAGGTAGGGGGCGAGGGTGGGtatggcggaggagaggtggacggagg
aagggggggaggcgggggcgacggcCTCTGGACCTTGGACAATCTGACCA
ACGGCGTGGACATGCTGAGtctggaaagggaggggaggacgccgggagga
aaggaaggaggacgccaGGCTGCCGCTTCGGCCTTGGCCCCTCCGGCGTt
gtggatggagggcgggccggAGAGCAGCCTGGGAGGGGGCTATGCCTatg
gcctgggggggggtGAGCATGCACGAACAGCAGCTAGGCTACTGGAGCTC
TCCCGCCACGGCGCCTGCGGCCGCGTCTTTGGCCTACCCGAGCTAccatt
tttctccttcttcccaccctcctccccatttcCCGCCCACGTCGACCGTG
CCGCCCtctgccgcttcctccgccggcacctaccccgccccttcctccct
ctcctcctcctcctccacctcttcggCCCCGGCGCCTTGGTCCTTCGCCA
CGgacattccctccttcgccgggACCAGCAAACCTCTCCCCTTGACCAAa
agctcgccctccctcccgtcctccctcccttcctcggccgcgtcctcgtc
ggaggccttggcggcgaaaggggaggagggagggaaggtgggagggcggg
agggaggggattaggggcagagagggaggtgggggaaggaggctgaGGGT
TAgaagggagagcaggaagagggggatcgaggaagggagaggaggaggag
agggggattgaggaagggagggaggaggagagggggatcgagaaagggag
ggagatcgagaaagggagggaggcgtggacgAGTATGCACAAGAAATAAG
GAGGTACATGCCTGGGGAAGTAAGTCTATGCCTGTGATtaggtgggaagg
gaaggaaagagggagggagggagggaaggagggaggggcagcatAGGAAA
GATGctcgagggaaaggaaggaaagagggagggagggagggaaggaggga
ggggcagcatAGGAAAGATGctcgagggaaaggaagggaggtgggcgtAT
CCGCACGGAGGAAGGTAtagaaaggcgggaaggtggtggtgctcctGGGA
GTGACAGGGGCGAAACCGAAGGGATGAATGTAAGAGCGAGTGAGAATCAC
TGAGGAAGacgcagggggcgggggtctgagagggaaaataaggaaaaggg
tggaaggaggggtggagggcaactgttggaaggagggaaggagggtggct
gATGAAGGGGTGGATCTTTTTGTTCTTTTGGCCGTGCCGTCCCATCGCTC
TCTCCAGGTGGACGTTGACGGTGCATGGACTCTATTTCGAGGAAGAAATT
CACGCGACAACGAGGGAcacaagggggaagagcgatAGAGCGAGCCTGCC
TTCACGCAGGGGAATGAAggctcgagggaggagaataaatctggggaagg
ggaaggagggcaaggttgGTCTATGGAGGTCTCGTCGccaggaaaaaaga
ggggggcagggagcggctcgaatggaggaggaagaagggaaaggggccgC
GCAAtcgcctgggagggagcgtgggggGACGGAACGaatcggggggggag
gaagaaaacatATCAAATTGCCACCGTGTTTGTCTTCAATGACGCAAgat
cctttctcttcccgagcaactgggaggaggcggcgttGAATGCTTCCGCG
TAACGCTAGGCCGTCGAAATCAAATTAAACAAGAATATGCGTTTTCCCCT
TGCACGAGGGGTGATAAATTATGAAGGAAGTACCACACCACGGACAAGAG
C back to topCoding sequence (CDS) from alignment at CM002469.1:46493..48293+ >rna6602 ID=rna6602|Name=rna6602|organism=Nannochloropsis gaditana|type=CDS|length=696bp|location=Sequence derived from alignment at CM002469.1:46493..48293+ (Nannochloropsis gaditana)
TACGAGGTAGGGGGCGAGGGTGGGtatggcggaggagaggtggacggagg
aagggggggaggcgggggcgacggcCTCTGGACCTTGGACAATCTGACCA
ACGGCGTGGACATGCTGAGtctggaaagggaggggaggacgccgggagga
aaggaaggaggacgccaGGCTGCCGCTTCGGCCTTGGCCCCTCCGGCGTt
gtggatggagggcgggccggAGAGCAGCCTGGGAGGGGGCTATGCCTatg
gcctgggggggggtGAGCATGCACGAACAGCAGCTAGGCTACTGGAGCTC
TCCCGCCACGGCGCCTGCGGCCGCGTCTTTGGCCTACCCGAGCTAccatt
tttctccttcttcccaccctcctccccatttcCCGCCCACGTCGACCGTG
CCGCCCtctgccgcttcctccgccggcacctaccccgccccttcctccct
ctcctcctcctcctccacctcttcggCCCCGGCGCCTTGGTCCTTCGCCA
CGgacattccctccttcgccgggACCAGCAAACCTCTCCCCTTGACCAAa
agctcgccctccctcccgtcctccctcccttcctcggccgcgtcctcgtc
ggaggccttggcggcgaaaggggaggagggagggaaggtgggagggcggg
agggaggggattaggggcagagagggaggtgggggaaggaggctga back to top
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