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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100875g1.7312.mrna |
| Orig protein id | gnl|cribi|Naga_100875g1.7312 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:44473..46390 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6601 ID=rna6601|Name=rna6601|organism=Nannochloropsis gaditana|type=mRNA|length=1238bp
GATGGTTGGAAATTAAGGGTTTGGTGCAGCAAGGCTCTATCAGCACGTCT
ATGGGATTTTTAGGGCCGAGATACTACCCATCCTCTTCCCATCTTGCCTG
CTGCCTCCTCTCCCTCTTGGGCTATTTCTCCCTGTCGGACTCGTTGCTTC
AAATTTCCAACACTTTGGGCTCCCACATGGTCTTGCAGCAAGCACCATGC
CGAGCAACAATTTTTGGACGGGCATCTTCCGGTGATGTCATTGCCATCAC
GCTTTCTCCTCCTGCCGACGAGACTTTTGATCTTAGGGCTCGGTCCTTAA
TAGATCTACTTCCAAGGAATGGAAATGAGAGTGCAACAACAGCCACAGAC
CCTTACGGGCAGTGGAAAGCATTTCTGCCACCAGTGCCCGGAGGGAAGAC
GGCCTTTGTGATAGGGATTATAAACAAGGGGACTGGGGAGAAGATCGAAC
TTGAGGACGTGGTCTTTGGAGACGTCTGGTTGTGCGCCGGGCAGGACAAC
ATGGCTTTCACCGTCGAAATGTCGCTCGAGGGGGACAAGGAAAGTCGCGA
TGCTGCTCAGGATCCCTACCTGCGCCTGTACGCTCTCGCCCCCCATCTCT
CACCCAGCCCCCTCCTCGATCCCGCCCTCCCTCCCCTCCTATCTTGGTCG
CGCGCCAGCCAAGCGGCGGTGACAGGCCCACCCTGGTCGTATTTCAGCGC
CGTCTGCTTCTTCTTTGGGCGGGAACGGTATCGGCTGCGGGAGGTGGGTG
GAAGGTCCGGGCAAACAGCATAGCCCGCAGCCCTGCACTTTCTTGACACG
GGTCTATGTTCGAATCCTGCCCGGTCCCTGTCCTTCTATGCGGTCGGGAG
CTTCTTTTACCCTGCTACTCGACACGTCATGCCCTTCTCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTTCTCCCTCCCTCCCTCGTA
GGTGCCCATTGGCCTCATCCAAGCGACGTACATGAACTCCGCCATAGCGG
CCTGGAGTGACGGCACTGCCGTCAATACCTGCCCTTCCTGGCTTCGACAG
GAAAAATGGCGCGAAAGCATGGACCGCCCCGGAGCTTCCTCCCTCTTCTC
CGACGGCGAGAACAGGAGGAGGCAGGGCGCCAGCGACGACAGTGACCACC
ACGAGACTACCGACTATATAGGAATGATCCACAGCCAGAAAAGCAAGCGT
CTTAGCAAGAGCAGCGGCAGCGCCGGTGGGAGGAAGGG back to topprotein sequence of rna6601 >rna6601-protein ID=rna6601-protein|Name=rna6601|organism=Nannochloropsis gaditana|type=polypeptide|length=301bp
MSVTAATWPESGMTSSHVNSCSTSSVNSSSSGSSGGHTTSSAGAGSDAYE
KPPLLGPGSSHATACSPLSSHSTTASAPPPETSSPPSSLPSPQLRSGVPS
LMSHGHRGLSPPHRGNIHHASLPSGPQDYHDARAYMPAASSCTSPSSSTS
TNTSSPGSSAMAGRPPHPPGRPAPLSAGPSTAMPLPPPPGAEVMEDIYVV
ADSANLFSGAQMVDGKRNMDIKVNLAKTLPLIDDARPIKHRIVVASFPER
SNRMWRYFEQRRYQIYVKSEETDVDDELAAQICAILTHVPEGKNTRVLVF
V back to topmRNA from alignment at CM002469.1:44473..46390+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6601 ID=rna6601|Name=rna6601|organism=Nannochloropsis gaditana|type=mRNA|length=1918bp|location=Sequence derived from alignment at CM002469.1:44473..46390+ (Nannochloropsis gaditana)
GTTTGACCTGCCGGCAAAAAGCTCTCCATCATGGCACGTCGCACGCGCCG
CTTCCCTTGCTTATGTTTCATCGATTGGGAGTTCTAGAGGCTTTGAATTT
GGGTGGTGGCGTGCTGGAGGGATTGACGGCAAAAACATGGCCCGATGGAC
GCAGGCCAGCCATGATTGCATTTTTACAGAGAAAGGGCAAACCGGGTTTT
GCTGAAATCGCCTCGTTTGTTATGAGTGCATGGGGTGCGGTCAAGATATG
CTAGGGAAGACTATCACTCCCCTCGGAGCCTCATTTTTTGCGAGGAGCCC
CCCCCGGGTTTCGTAGGGGGTGCCCGGCTTCGGAAGTGACGCCTAGAAGA
CAGGACGGGGTCATTGGCTTTAGGCATGTCAGACTTCTGCCACGTCGCTA
CCATTTCTTGAACACTCAGACTCTGTTCCTGTCGCGCCCATTTACTCGTT
AATAGGTGGGTAGGTAGGCACCTCCAAGCTTACTACCCAAGCCTGAGCAT
CTGTGAAGGCAAGCACGTGgcgcttcccttccctgaTAGTCTGTAGAGAA
AGGTACGTgtgctcctttttcctcttcactGGTTGGAAAGAGAGTGAATC
CTTGGTATGACCCTGACCATGTCGAATTGCCGgaccttctcttcctttgt
CCATCCACCCACTCCCAGTCACGACACCCCCACGCTCCGGGCTATCTTCC
ACACCGAGGTTGTCAACCATTGCTCGGCCCTATTTATGAGCGTGACAGCT
GCGACGTGGCCGGAGAGTGGCATGACCAGTAGCCACGTGAACAGTTGCAG
TACCAGCAGTGtgaacagcagcagcagtgggaGCAGCGGTGGCCACACCA
CGTCAAGCGCAGGCGCAGGGAGTGACGCGTACGAAAAGCCTCCTTTGCTC
GGACCGGGGTCATCCCACGCCACCGCTtgctcgcccctctcctctcattc
caccaccgcctcggctcctccccccgagacctcctccccgccctcctccc
tgccttccccccagcTGCGAAGCGGGGTTCCGTCGCTCATGTCCCACGGC
CATCGTGGCTTGAGCCCTCCGCATCGCGGTAACATccaccatgcctccct
ccccagcggGCCCCAGGACTACCACGACGCCCGGGCCTATATGCCTGCGG
CTTCGTCCTgtacctcgccctcctcctccacctccaccaacacctcctcc
ccaggGTCCTCGGCGATGGCGGGCcgtcccccccatccccctggccgccc
ggcccctctctccgccgGCCCGAGCACGGccatgccccttccccccccgc
ccggggCAGAGGTGATGGAAGACATTTATGTGGTGGCGGATAGTGCCAAT
CTCTTCAGCGGGGCGCAAATGGTGGACGGAAAGCGAAACATGGACATTAA
GGTAAGTTCAAAGCTCCCCTGGTTGGCCTGCCtaccttcttttcctccct
cctcgccttcttgtTCGCCCCCCTtggtggcggggggcgtACTGTCTGGC
GTGGCCTCGGAATGGAGGAACCGATCGGGGAGGAtaaccctaatcctaac
TTTTTGTGGTTCGGttttgggaggaggcgtcgtTCTTTGTGGCGCGACCC
TGTTCCTTCCGTTGTAGCATTCAAACCCTGCAACATTTGAAATTCAAAAA
TTCAAACTGAACGGTCACCATCCACCCTCCAGGTCAACCTGGCCAAGACG
CTTCCCTTGATCGATGACGCGCGGCCCATCAAGCACCGAATTGTGGTAGC
CTCCTTCCCGGAACGCAGCAACCGCATGTGGCGATACTTCGAGCAACGCC
GGTACCAAATTTATGTCAAGAGCGAGGAAACCGACGTGGACGACGAATTG
GCGGCGCAGATTTGTGCGATTCTTACCCATGTcccggaggggaagaataC
CCGGGTGTTGGTCTTTGT back to topCoding sequence (CDS) from alignment at CM002469.1:44473..46390+ >rna6601 ID=rna6601|Name=rna6601|organism=Nannochloropsis gaditana|type=CDS|length=1804bp|location=Sequence derived from alignment at CM002469.1:44473..46390+ (Nannochloropsis gaditana)
ATGAGCGTGACAGCTGCGACGTGGCCGGAGAGTGGCATGACCAGTAGCCA
CGTGAACAGTTGCAGTACCAGCAGTGtgaacagcagcagcagtgggaGCA
GCGGTGGCCACACCACGTCAAGCGCAGGCGCAGGGAGTGACGCGTACGAA
AAGCCTCCTTTGCTCGGACCGGGGTCATCCCACGCCACCGCTtgctcgcc
cctctcctctcattccaccaccgcctcggctcctccccccgagacctcct
ccccgccctcctccctgccttccccccagcTGCGAAGCGGGGTTCCGTCG
CTCATGTCCCACGGCCATCGTGGCTTGAGCCCTCCGCATCGCGGTAACAT
ccaccatgcctccctccccagcggGCCCCAGGACTACCACGACGCCCGGG
CCTATATGCCTGCGGCTTCGTCCTgtacctcgccctcctcctccacctcc
accaacacctcctccccaggGTCCTCGGCGATGGCGGGCcgtccccccca
tccccctggccgcccggcccctctctccgccgGCCCGAGCACGGccatgc
cccttccccccccgcccggggCAGAGGTGATGGAAGACATTTATGTGGTG
GCGGATAGTGCCAATCTCTTCAGCGGGGCGCAAATGGTGGACGGAAAGCG
AAACATGGACATTAAGGTCAACCTGGCCAAGACGCTTCCCTTGATCGATG
ACGCGCGGCCCATCAAGCACCGAATTGTGGTAGCCTCCTTCCCGGAACGC
AGCAACCGCATGTGGCGATACTTCGAGCAACGCCGGTACCAAATTTATGT
CAAGAGCGAGGAAACCGACGTGGACGACGAATTGGCGGCGCAGATTTGTG
CGATTCTTACCCATGTcccggaggggaagaataCCCGGGTGTTGGTCTTT
GTATGAGCGTGACAGCTGCGACGTGGCCGGAGAGTGGCATGACCAGTAGC
CACGTGAACAGTTGCAGTACCAGCAGTGtgaacagcagcagcagtgggaG
CAGCGGTGGCCACACCACGTCAAGCGCAGGCGCAGGGAGTGACGCGTACG
AAAAGCCTCCTTTGCTCGGACCGGGGTCATCCCACGCCACCGCTtgctcg
cccctctcctctcattccaccaccgcctcggctcctccccccgagacctc
ctccccgccctcctccctgccttccccccagcTGCGAAGCGGGGTTCCGT
CGCTCATGTCCCACGGCCATCGTGGCTTGAGCCCTCCGCATCGCGGTAAC
ATccaccatgcctccctccccagcggGCCCCAGGACTACCACGACGCCCG
GGCCTATATGCCTGCGGCTTCGTCCTgtacctcgccctcctcctccacct
ccaccaacacctcctccccaggGTCCTCGGCGATGGCGGGCcgtcccccc
catccccctggccgcccggcccctctctccgccgGCCCGAGCACGGccat
gccccttccccccccgcccggggCAGAGGTGATGGAAGACATTTATGTGG
TGGCGGATAGTGCCAATCTCTTCAGCGGGGCGCAAATGGTGGACGGAAAG
CGAAACATGGACATTAAGGTCAACCTGGCCAAGACGCTTCCCTTGATCGA
TGACGCGCGGCCCATCAAGCACCGAATTGTGGTAGCCTCCTTCCCGGAAC
GCAGCAACCGCATGTGGCGATACTTCGAGCAACGCCGGTACCAAATTTAT
GTCAAGAGCGAGGAAACCGACGTGGACGACGAATTGGCGGCGCAGATTTG
TGCGATTCTTACCCATGTcccggaggggaagaataCCCGGGTGTTGGTCT
TTGT back to top
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