|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101271g2.4532.mrna |
| Orig protein id | gnl|cribi|Naga_101271g2.4532 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:31029..32216 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6595 ID=rna6595|Name=rna6595|organism=Nannochloropsis gaditana|type=mRNA|length=1441bp
TCCTCCTCCTCCTCCTCCTCCTCTGCCTCCCACCCCGCAGCGGCAGATTC
CAAGCTTTTGTCCCTCCCTCCTCCAACTCCTGCTGACATCACACCCAAAG
TCGAAACCGCCCTCCTCGCTGCCACCGCGGCCGGCGCCCTGGAGCCCATC
CACGAAGACACCAAGGCCGAAGAAGCGTCCTCCCCTTCCTCCGCCCCTTC
CTCCGCCTCGCCCTCTTCCCCTTCCTCGTGGGGCAAAATTCCGTTCCCTT
CCCTCCCCCTCCACCTCCTCACCCTTCCCATCTTCTTCTGTGCCTTCCTT
CTCGGCCTCTTCCTCCTCTCGGCCCTGTCTTCCCAATCCATCATCCTCAA
GGAAGGGGACGTCCTGCGTCCTGGTGACTCCCTCCGGTACCGGTGCAGCT
TCAGCGATTACTTCCCCGCTCCCTCCCCCTCTTCCTCTACCCCTTCCTCC
TCCCCTGCCTGCCACGACCTGGATCTGGTGCTGGGAAAGGACGGCGTTTT
GTCACTTTACCGGGACCGAATGCGGGAGAAACGGGCCTTGATGTGGCAGA
GCGAGGGCGGGAAGGAGGGCGGGAGCGAGGGCGGCTACGTGGCAACTGTG
GATGAAAGGGCCCGCCTGGTGGTGATGAGGGAGGAAGGGGACGTCGTGTG
GTCGTCGCCTCGGTTGTTGAGTAAGGGCGGGAAGGAGGGAAGGGAGGAAG
GGAGGGCAGCAGCAGTCCTGGATGGTGTCATGGGGGGAATGTACGTGATG
GACGGCGCAGGACAGCCCACGTTTGCGACCATCTGGTAGGGAGGGAGGGA
GGAAGGGGGGGAGGGCGAGGGCGGGGTGGGTGGTATACATAGGGAATAGT
GCCACGTGGCGAGGAAAGGCCGGGACGGGCGTGGTACAGGGAGGAAGGTG
GGGGGAGCGAAGACAAGTTTTGGGATCGCCGGGTCTTCTTTTACGGCGAC
TGACTGCCCTGCAGCGCGCTAGGAACATTCAAAGGCGTATGTAACGGGCC
ATTCAAAATTTTAAACCGAGGACAAGGAGGATTTTTTTGCAATTTGAAAG
TGCACGGCGATTATCGTAGTCTCTGCATATATTCACGCTCTGCCGCCTCA
TTGATAGTCTTGCCCTCATGGCAAGAGGAATCCCTCCCCCCCCACCCTGA
GAAATTTTAAAATTTAATTTAAACGACAAGTCATTTTTGGGGCGGTTAAA
TTTCTGCCCCCGCTGTATGGGTAGGTTAAGGAAAAAGGGAAGGCAGGGAG
CGTCGCAAGGCCTGCGAGACAGGATTGATTGCCATAAGGGGAGGGAAAGG
TAAGCAGTGGGATCAGCCCGTATGCTGAGGTAGCGGGGGAGGGAGGGAGA
GGAAGAGGCCGGATCCGTGAAGGCGATACTCCCAAGGGGATGGAAGCCTC
TGGAGCCATCATGAAGAAAAAACGGCTGTGTGGGGACACGT back to topprotein sequence of rna6595 >rna6595-protein ID=rna6595-protein|Name=rna6595|organism=Nannochloropsis gaditana|type=polypeptide|length=352bp
MESTKCIAASEPMPAVPSSPYRRRSSGSSPRRRRTQAPLTGSKWIFHHLN
QWQAPLTLLTWIINLVIFMPSSGNFKLMRWVDASFVLWLQFPKKRTHQFV
THGLQNIWAPILLMETLYVYAYAHRYLAYSHLLLLPLGASYWIVHNRLAR
AEQRLRVSKGKTISWEEYGCIYLPFALKSGFFSVSAFMNLPFLLRKLVPD
LPAWARAGAGAVAHIGMVGLGLSAVLEHNCAATFLFVLWGLHGGASRLPG
TVSLPVFFLTFLRAYSSLGAYVRGWALAHSLEGGFCTGYEWLDKVLACAD
EVSHVLTERLDWLEAFLADSFQLAVTRVHYFQIALYTSIRDWRPLPSSSS
SS back to topmRNA from alignment at CM002469.1:31029..32216- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna6595 ID=rna6595|Name=rna6595|organism=Nannochloropsis gaditana|type=mRNA|length=1188bp|location=Sequence derived from alignment at CM002469.1:31029..32216- (Nannochloropsis gaditana)
CATAATGATTTCATCTGTCGTCTATTTGGTGTAGATTACGGAAGCTTTGA
TTCACACCTATTGCGTCTAATCATAAGTCAAAAATCGCAAAAGCTCGCTC
ACGGCAGTCACCTATCTTTTCGCCTTAGGAAATGGAATCAACTAAATGCA
TCGCGGCGTCTGAGCCTATGCCTGCGGTGCCCTCTTCTCCGTACCGACGA
AGAAGCAGTGGGAGCAGTCCACGGAGGAGGAGAACGCAGGCTCCTTTGAC
GGGCAGCAAGTGGATATTCCACCACCTCAATCAGTGGCAAGCCCCCCTCA
CCCTCCTGACATGGATCATCAACCTGGTCATTTTCATGCCAAGTTCTGGC
AATTTCAAACTTATGCGCTGGGTGGACGCGTCCTTCGTGCTTTGGCTACA
ATTTCCCAAGAAAAGGACGCATCAATTTGTCACCCACGGTCTGCAGAATA
TATGGGCCCCTATCCTCCTCATGGAGACGCTCTATGTGTATGCCTATGCG
CACAGATACTTGGCCTACTCCCATCTCCTCCTCCTACCGCTGGGGGCGTC
CTACTGGATCGTCCACAACCGGTTGGCGCGGGCGGAGCAGCGGCTTCGGG
TCTCCAAGGGGAAGACGATTTCCTGGGAGGAGTATGGATGCATCTACCTC
CCTTTCGCGCTCAAATCCGGATTTTTTTCCGTGAGCGCCTTCATGAATCT
GCCGTTCCTCCTCCGCAAACTCGTCCCAGACCTGCCCGCGTGGGCCCGGG
CGGGGGCGGGCGCCGTGGCCCATATAGGCATGGTGGGGTTGGGCCTCAGT
GCGGTGCTCGAGCACAACTGTGCCGCAACCTTCCTCTTTGTCCTGTGGGG
GCTCCACGGGGGTGCCAGCCGCCTTCCCGGCACCGTGTCCCTCCCCGTCT
TCTTCCTGACCTTTTTGCGTGCGTACTCGTCGTTGGGTGCCTATGTCCGC
GGATGGGCCCTGGCGCATTCCTTGGAGGGAGGTTTCTGTACCGGCTACGA
ATGGCTCGATAAGGTCTTGGCCTGTGCGGACGAAGTCTCGCACGTGCTGA
CGGAACGCTTGGATTGGCTCGAGGCCTTCCTCGCGGACTCCTTCCAGCTT
GCCGTCACCCGTGTCCATTACTTCCAGATCGCCCTTTATACTTCCATCAG
GGATTGGCGCCCTCTTCCTTCCTCCTCCTCCTCCTCCT back to topCoding sequence (CDS) from alignment at CM002469.1:31029..32216- >rna6595 ID=rna6595|Name=rna6595|organism=Nannochloropsis gaditana|type=CDS|length=1057bp|location=Sequence derived from alignment at CM002469.1:31029..32216- (Nannochloropsis gaditana)
ATGGAATCAACTAAATGCATCGCGGCGTCTGAGCCTATGCCTGCGGTGCC
CTCTTCTCCGTACCGACGAAGAAGCAGTGGGAGCAGTCCACGGAGGAGGA
GAACGCAGGCTCCTTTGACGGGCAGCAAGTGGATATTCCACCACCTCAAT
CAGTGGCAAGCCCCCCTCACCCTCCTGACATGGATCATCAACCTGGTCAT
TTTCATGCCAAGTTCTGGCAATTTCAAACTTATGCGCTGGGTGGACGCGT
CCTTCGTGCTTTGGCTACAATTTCCCAAGAAAAGGACGCATCAATTTGTC
ACCCACGGTCTGCAGAATATATGGGCCCCTATCCTCCTCATGGAGACGCT
CTATGTGTATGCCTATGCGCACAGATACTTGGCCTACTCCCATCTCCTCC
TCCTACCGCTGGGGGCGTCCTACTGGATCGTCCACAACCGGTTGGCGCGG
GCGGAGCAGCGGCTTCGGGTCTCCAAGGGGAAGACGATTTCCTGGGAGGA
GTATGGATGCATCTACCTCCCTTTCGCGCTCAAATCCGGATTTTTTTCCG
TGAGCGCCTTCATGAATCTGCCGTTCCTCCTCCGCAAACTCGTCCCAGAC
CTGCCCGCGTGGGCCCGGGCGGGGGCGGGCGCCGTGGCCCATATAGGCAT
GGTGGGGTTGGGCCTCAGTGCGGTGCTCGAGCACAACTGTGCCGCAACCT
TCCTCTTTGTCCTGTGGGGGCTCCACGGGGGTGCCAGCCGCCTTCCCGGC
ACCGTGTCCCTCCCCGTCTTCTTCCTGACCTTTTTGCGTGCGTACTCGTC
GTTGGGTGCCTATGTCCGCGGATGGGCCCTGGCGCATTCCTTGGAGGGAG
GTTTCTGTACCGGCTACGAATGGCTCGATAAGGTCTTGGCCTGTGCGGAC
GAAGTCTCGCACGTGCTGACGGAACGCTTGGATTGGCTCGAGGCCTTCCT
CGCGGACTCCTTCCAGCTTGCCGTCACCCGTGTCCATTACTTCCAGATCG
CCCTTTATACTTCCATCAGGGATTGGCGCCCTCTTCCTTCCTCCTCCTCC
TCCTCCT back to top
|