rna6591, rna6591 (mRNA) Nannochloropsis gaditana

Overview
Namerna6591
Unique Namerna6591
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length353
Alignment locationCM002469.1:15609..17080 -

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101802g1.9666.mrna
Orig protein idgnl|cribi|Naga_101802g1.9666
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:15609..17080 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101802g1gene6370Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24098.1cds6575Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6591rna6591-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6591 ID=rna6591|Name=rna6591|organism=Nannochloropsis gaditana|type=mRNA|length=353bp
GTCAACGGATGTCAGGGGCGGATCGAAAGAGGGAGGGAGGGAGGGAGGGA
TGGATAGAGGGAGGGACGGAGGGAGGGGCCGATGCACCTCAAACTTGAAT
TGAGGGAGGGGAGAGAGAGGAGATGATTTGTGGGAGGGTGGGAGAGAGTG
GATTTTGTGCGATTGCTTCTGGGAGAGATGTCATTTCAAAGTCACAAATG
CATCCGGTGCGAGATGCTCTTACAGGGTCACAGGCAAACATGCTCGATGG
GCGATACGAATTTGAAACGGGCGCGAGAAACGGTCGCAGTCAAAATTTTG
AAATCCATGTTCAACCCTTTCCTTTCCCATTCCCCCTCCCGCAAGTGCCT
TGA
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protein sequence of rna6591

>rna6591-protein ID=rna6591-protein|Name=rna6591|organism=Nannochloropsis gaditana|type=polypeptide|length=148bp
PSLLPSPVPGLLSSPPRAHPFPSRRFRRPPHPDHPRCLPPCLRPALPPNS
GRPPSFPPPSSAGLAPGLRDQHHHGRYPALGKAQPPPRAFRGVAVAVPCQ
QGGKQRLVDGGRGGRSEGRKGGREGGRVRQAPLRMVGRGRLLQRWSAC
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mRNA from alignment at CM002469.1:15609..17080-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6591 ID=rna6591|Name=rna6591|organism=Nannochloropsis gaditana|type=mRNA|length=1472bp|location=Sequence derived from alignment at CM002469.1:15609..17080- (Nannochloropsis gaditana)
CCCTCCCTACTTCCTTCCCCAGTCCCAGGGCTTCTATCATCACCACCACG
AGCACACCCCTTCCCAAGCCGCCGGTTCCGACGCCCCCCCCACCCCGACC
ACCCTCGATGCCTCCCCCCCTGCCTCCGCCCCGCTCTCCCACCGAACAGC
GGGCGCCCTCCCTCCTTCCCTCCCCCATCCAGCGCAGGCCTCGCACCAGG
ACTACGTGACCAACACCATCACGGCCGCTACCCCGCATTGGGGAAAGCAC
AGCCACCGCCACGCGCATTTCGCGGCGTCGCCGTCGCCGTCCCATGCCAG
CAAGGGGGGAAGCAGCGGCTCGTTGATGGAGGAAGAGGAGGAAGAAGTGA
AGGAAGGAAGGGAGGGAGGGAGGGTGGGAGGGTGCGGCAGGCACCACTGA
GGATGGTAGGGCGGGGGAGGCTTTTGCAACGGTGGTCAGCTTGTTGAATT
TTAAGTATTGTATTGGAGATTCCCAGAATTTAAGTGTTGTATGCAGCCCG
CGCAGACAGGGCGAGATGTCTCATTTTAGATCTTGAAGACGAGGGGAGGG
TGCGATGGGGAGAGGGGAGATGCCGGCAGGGGTCGCCGTGAAAGCATTCC
GAAGACTCACAGCGCGACACCGTGCACGCCTGCCAAAATTGCGCGAAAAG
TGTTTCGTGGGATTCGCGAGACAGGAGCCGCGCACAGGATTTATTCTCTT
TCGGAGGGGGGCCAGGCCCGAGGGTGCTGGGTCGGCGTCTCCTCCTTCCA
GTCCTGGAAAAAGGCGCGAAAACTGAAAATATACCAGCACGAACATTGCC
AGGCTCGACGTCCCTCTAGTCAATGGGGAGAGCGGCCTCGGTGGGCATTG
GAAAGTATGGCGCGAAAGCTGGAAAGACAGGAAACGGGTCAGGTGGGGAG
GGAGCCCGCTAGGCGTCGCTGCAAGAGGAGGTAGAGGGGAAGGAAGCGAG
GAGTCGGGCGTGCGGTCCAGGCAGGGGAGGGAGACCTGAGTGGTTCGCCG
AGGTGAGAAGGAGCGTCAGGGACAGCTTGAGGTAGGAAGGAGGGAAGGAG
GGAAGGAGGGAAGGAGGGGCGAAAGGAGGAGTCACCAGCCTTGGCCAAGC
GTTTAGTCTTTGGCGGTTGTCGCGGGAAGGAAGGGAGAGATGGAAGAGGC
AACGAGGAAGGGGGAAAAAGCTGGGTTGGGTAAGAGTCCGTGAATGGGAT
GATTCTTCAAGATGGGGAGGGCGGCAAGGAACAAGGGGAGAGCGGGAACG
CCGTGGGAGGACGGCTATAGAAGACATGCCACAGGATCAAAGAAAAAAGC
AACCATTCAAGGCACTTGCGGGAGGGGGAATGGGAAAGGAAAGGGTTGAA
CATGGATTTCAAAATTTTGACTGCGACCGTTTCTCGCGCCCGTTTCAAAT
TCGTATCGCCCATCGAGCATGTTTGCCTGTGACCCTGTAAGAGCATCTCG
CACCGGATGCATTTGTGACTTT
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Coding sequence (CDS) from alignment at CM002469.1:15609..17080-

>rna6591 ID=rna6591|Name=rna6591|organism=Nannochloropsis gaditana|type=CDS|length=447bp|location=Sequence derived from alignment at CM002469.1:15609..17080- (Nannochloropsis gaditana)
CCCTCCCTACTTCCTTCCCCAGTCCCAGGGCTTCTATCATCACCACCACG
AGCACACCCCTTCCCAAGCCGCCGGTTCCGACGCCCCCCCCACCCCGACC
ACCCTCGATGCCTCCCCCCCTGCCTCCGCCCCGCTCTCCCACCGAACAGC
GGGCGCCCTCCCTCCTTCCCTCCCCCATCCAGCGCAGGCCTCGCACCAGG
ACTACGTGACCAACACCATCACGGCCGCTACCCCGCATTGGGGAAAGCAC
AGCCACCGCCACGCGCATTTCGCGGCGTCGCCGTCGCCGTCCCATGCCAG
CAAGGGGGGAAGCAGCGGCTCGTTGATGGAGGAAGAGGAGGAAGAAGTGA
AGGAAGGAAGGGAGGGAGGGAGGGTGGGAGGGTGCGGCAGGCACCACTGA
GGATGGTAGGGCGGGGGAGGCTTTTGCAACGGTGGTCAGCTTGTTGA
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Synonyms
Publications