rna6587, rna6587 (mRNA) Nannochloropsis gaditana

Overview
Namerna6587
Unique Namerna6587
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length3189
Alignment locationCM002469.1:893..1458 -

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Properties
Property NameValue
Productmg chelatase subunit
Orig transcript idgnl|cribi|Naga_102668g1.44.mrna
Orig protein idgnl|cribi|Naga_102668g1.44
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:893..1458 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102668g1gene6366Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6587rna6587-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24102.1cds6571Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6587 ID=rna6587|Name=rna6587|organism=Nannochloropsis gaditana|type=mRNA|length=3189bp
ATGTCGCTCAGTATGTTGCGCTACCTGAGGCTTGTCGATCAGGCAGGTCC
TCAAAAACATTATCAGCTTTGGGTCTTTCTCAAATTGAGAAAGAGTATGC
GCACACGGCATCCCTACATCCTTAACTTACTTGCCACCGATATTTTTGCG
TGTGGACGGATGGTGCACGAGTTGCCGAGAGACGGAAGAGGAGCGCTAGC
ACGTCACTCGTCTTCCTCATCCTCTTGCCAAACCGCGGTGTCAGGGGGCG
ATTTAGGGACGGAAACCTGCAACAAGTCCTCAAGCCTCGACAAAAGTGAA
ATCATTACTGAGGTAGAGGGGTCCAAAGAAATCAAGGAAAGGACCGACAG
CGAAGAGGAGGGAGGACGGCATGGAGGACATGGAGCGCCGTATTCGGGGG
AGAAGCACCTGGGCCGAGACTACTATTCCAAGCGTTTCAGGCTCCTTGTG
CAGTACATGGTGGAGGGCGGGCCTCCTATCGCGATGCGCGAAGAGATGGA
GACGCGCGGGGACGGTCTGCCATCCTTCCAGTGGAAAATGGCGGTGGTGA
ATTTCATGAATCAAGCATTTTTATGGCCTCAAGATACCTTGAAAGACGAG
TACCTGCCCCTCCTCCACGCTCTGGACGACGTCCCTGGTGCCGTCATGGG
CAGCTTCCACAACACATTCGACGCTTGGCACGCCAAAGTTCGCCGGCACA
GCTACACTATGAGCGGGGAGAAACCGGCTCTCCCGCCTCTTCCCCCTGAA
TTTATGCGCGTGGAAGCCATCCTTCTTCCCTTTATCATCCGCTCCCTGGC
CGCTGCTCGTCCGCTCTCAGCGCCGAGTCTGGCCGGTGTGGAAGGGGAAG
GAAGGGAAGAATCGGGGGAGGAGACAAAGCTGGGTGGAGAGCGGCAACGG
ATGGGAGAGTCGACGGCGGATAAGGAGAGGAAGGCGATGAAGGACAGTGG
CCTCGGCCAGCTGGTGCGCGTGTGTGACATGCGGCTTCCTCACGACTGGT
ACCCCTACGCCCGCCTCATGCGGAGGAAGATCATATACCACGCAGGCCCC
ACCAACTCCGGCAAAACCTATCATGCGCTTCAGCGCCTGAAAATGGCCGA
TCCGGCGAAAGGGGGCGGCCTGTACCTGGGGCCCCTCCGCTTGTTGGCTC
TCGAGATCTATGATACACTTAACGAGGAGGGCGTCTACTGCTCTCTGCTC
ACCGGCCAGGAGAAGAGGCTTATTCCCTTCTCCGACCACACCAGTGCTAC
GGTTGAAATGTGCAGCTTGCGTCAGGACTACGACGTGGCGGTGCTGGATG
AGATCCAGATGATCGGCGACCCAGAGCGAGGCCACGCCTGGACTCGCGCT
CTCCTGGGGCTCCGAGCCAAGGAGATTCACCTGTGTGGAGGACCCGAAGC
CGTGGAAGTGGTCTCCCGTCTCTGCCAGGCTACTGGAGACGACCTGGAGA
TCCGAAAATATGAGCGTATGACGGAACTTACCATCGCCTCCGAGCCGCTG
CTTGACTACTCCAAGGTAATGGTAGGAGACTGCATTGTTGCCTTCAGCAA
GTCCGACATTTGTTCCATTAAACAAGAGATCGAAGCCAAGACCAGTCACA
AGTGCTGCATGGTCTATGGCTCCCTTCCCTCCGAGACACGGTCCGCCCAG
GCGCGAATCTTCAACGAAGAGGGAACGGGCTTCGACGTCCTGGTCGCCAC
TGATGCCATTGGAATGGGCCTGAATCTCAACATCAGGCGGATCATTTTCC
ACTCTCTTATCAAAGTATCCGACGAGGGCGGTGCTGAGGTGTTGCATTCA
GGTATGATCAAACAGATCGCTGGCCGGGCCGGTCGTCGTTCGTCCCGCTT
TCCCCGGGGCGAAGTCACGTGCTACAAGGGAGAGGACATGGAATTTCTTC
GACAAGGGTTGGGCACGGCTACCGAGCAAATCGCCCGGGCCGGCCTATTT
CCTTCTCCTGAACAACTAGAGGATTTTGCGTCGCTCCTAGAATCACAGGT
GGGACGGATAAAGGGCAGCGGGGAACTGGGGGGAGAAGAAGGAAGGTGGC
AACAACGGAAGAAAGGCTTATCTTCTCCGCTCCATGCGAGTTTTTTTGCG
AGAGACATTGGATTGGAGATGAACAGAGGGAAGAAGGAGGAGAATGGGAA
GGAAGAGACGGGCGAGGAAGGGCAACAGACGTCAGAAGAAGAGGAGGAGG
GCCTGGGACTGATGGAAGTCATGGACTCTTTCTTCAACATGGCGGAGGTC
TCGGACACCTACCACATGTGCCGCTCCCGATCCATGGCCTCCATCGCCTC
CTACTTGGCGCAAGTCAAGCCCCTGTCCATTGCTGAGCGCTATATCCTCT
CGTCGGTGCCCATTAGCAGCCGCGATAGATTCGCTATGCAGATGCTTTAT
CAATTTGCTGCCGCCCGGGCGGCGCGCCGGCCCATGCCGCTCTCCGTTCG
CCTGCCCGCGTCCCCCCCTACCACACTTCTCGGCATGAATGAGCTCTGCA
CCAAGCACTCCGTCCTCGACGCTTATCTATGGCTCTCGCACAAATTTCCC
TCCACTTTCGTCCAGCGCGAATCTGCCCTGCAAATGCGCGTGAAACTCAC
TCGGATGCTGGAGTCTGGCCTCAAGCTCGGCATGTTGGTGGAGCACTCGC
ACCATGACCGCGACGCCCGTCTGCGCCACCAATTTGCCTTAAAAATGGAA
AAGCTTCATGGTATCCCCTACAAGCCTCCTGCTCCTTCTCAGATCCCTCC
TTCCATTCGCATCGAGGAGGACACGGGCGCTGAAAACGACGATGAGGAAG
AGGAAGAAGAGCGCTGGCGTAAAGAGAAAGACGACGAGGCTGAGCATGCT
AAATTATTGGAAGAGAGGGGGGAGGGAAAAGAAAATGGAACAAGGGGAAG
CGTACTTGATAGGCAGTCGCAGACGGGAAGGAGGAAGAAATCAGATGCCG
CAGTGAGAGTACGTGAAGGAAAGGGATTTTTGAGCGATGAGGAGGAAGAG
GTCATCCGGGGTTTATTTGCTTTCCGACTGGCGCGCTTCCACAAGGAACT
GGAGGCAAAGCGCAAAGGAAAGGAAAGAAAAAGGGAACAAGGGCGCGATC
TCATCGATGCTGGGGAAAAGTATGCCCACAAACCTGAGGTAGCGGAGGTA
GGAGAGGCGCAAACGACAGCAGCAGAGGGGACTCCGTAG
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protein sequence of rna6587

>rna6587-protein ID=rna6587-protein|Name=rna6587|organism=Nannochloropsis gaditana|type=polypeptide|length=102bp
MTSAVPFLPPSLPPFLPPSLLKERLKSSRRNWKDLETEIIPAPFVEVPIG
VMEDRLLGSIDLEESIRKGKAAFQPGGEGGREGGREGGRGDDFKTQERDP
GS
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mRNA from alignment at CM002469.1:893..1458-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6587 ID=rna6587|Name=rna6587|organism=Nannochloropsis gaditana|type=mRNA|length=566bp|location=Sequence derived from alignment at CM002469.1:893..1458- (Nannochloropsis gaditana)
TCCCGTTCTCCCTCAATCCCTCATGTATCATCTGTTCTGCCGAAGATGAC
CTCAGCTGTCCCTTTCCTCCCTCCCTCCCTCCCTCCCTTTCTCCCTCCCT
CCCTCCTTAAGGAACGGCTGAAAAGTTCCCGCCGAAACTGGAAAGATTTG
GAGACGGAGATTATCCCTGCTCCATTTGTCGAGGTACCCCTCTCTCCCTC
CCGCCCTCCCTCCCTCCCTATCTCTCTGCATGCCTCCTTCCCTCCCTTTC
CCTTCCCCTCCCTCCCTTCCTCCCTCCCCTCTTCCCTCCCGACCTCTTTC
CTTTTTTTTCATCCGTCCCGTTTGGCCCATTCACACTAATACTTCCATCT
CCACCGTTCTCACACCCCTCCTCCCTCCCCTTCTCCCTCCTTCAGGTCCC
CATCGGGGTCATGGAAGACCGGCTTTTGGGTTCGATTGATTTGGAGGAGT
CTATCCGGAAGGGAAAGGCGGCCTTCCAGCCAGGTGGGGAGGGAGGGAGG
GAGGGAGGGAGGGAGGGAGGGAGGGGGGATGATTTTAAGACCCAGGAAAG
GGATCCAGGGAGTTAG
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Coding sequence (CDS) from alignment at CM002469.1:893..1458-

>rna6587 ID=rna6587|Name=rna6587|organism=Nannochloropsis gaditana|type=CDS|length=618bp|location=Sequence derived from alignment at CM002469.1:893..1458- (Nannochloropsis gaditana)
GTCCCCATCGGGGTCATGGAAGACCGGCTTTTGGGTTCGATTGATTTGGA
GGAGTCTATCCGGAAGGGAAAGGCGGCCTTCCAGCCAGGTGGGGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGGATGATTTTAAGACCCAG
GAAAGGGATCCAGGGAGTTAGATGACCTCAGCTGTCCCTTTCCTCCCTCC
CTCCCTCCCTCCCTTTCTCCCTCCCTCCCTCCTTAAGGAACGGCTGAAAA
GTTCCCGCCGAAACTGGAAAGATTTGGAGACGGAGATTATCCCTGCTCCA
TTTGTCGAGGTCCCCATCGGGGTCATGGAAGACCGGCTTTTGGGTTCGAT
TGATTTGGAGGAGTCTATCCGGAAGGGAAAGGCGGCCTTCCAGCCAGGTG
GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGGATGATTTT
AAGACCCAGGAAAGGGATCCAGGGAGTTAGATGACCTCAGCTGTCCCTTT
CCTCCCTCCCTCCCTCCCTCCCTTTCTCCCTCCCTCCCTCCTTAAGGAAC
GGCTGAAAAGTTCCCGCCGAAACTGGAAAGATTTGGAGACGGAGATTATC
CCTGCTCCATTTGTCGAG
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Synonyms
Publications