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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100286g5.3552.mrna |
| Orig protein id | gnl|cribi|Naga_100286g5.3552 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:840036..842324 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6580 ID=rna6580|Name=rna6580|organism=Nannochloropsis gaditana|type=mRNA|length=462bp
ATGAGGAGAGGAGGGACAGGCTGTGCGCTCGATCACTCAATTTTTGGGTG
CGTCTTGCTACTTTGTGAGTGCGTGGGTGGATGGATGACTTCGTGTGTCG
CTCTCTTTGCTCGTTTCGGCCTTGCTTCGGGCGTACAGACGCGTTTTCCT
TGTGAGACGTGTAGTATTGCCTTGGAGGAGAGAGTGTACACATATATAAG
CCAAAGCACTCGAAGTAAGCCAGCCCCAGCAACAACAACCAGCAGAAATT
CAGTCAAACAAATTGTTGTACTTATACGACGTGGAGCAGGAACTCGTAAA
GGGCAATGTTTGAACATGGAGGTCTATGAGGAAGTCTTTTGCTATCCAAG
GCTCAGGGGCAGAGAGAGAGATGGGAGTGTGCGACATCAAACACTTGGAC
CTTTACGTAAACGATGCGGTGGACAAGGAAAAGTGCATGAAGCAGAACAT
GTCAGCCGATAG back to topprotein sequence of rna6580 >rna6580-protein ID=rna6580-protein|Name=rna6580|organism=Nannochloropsis gaditana|type=polypeptide|length=683bp
MPAEGLRARRYVYGGLLAAVGVAVALALVFTVGGAGQKDKAAVASEPNVA
SLDTDVNIKDVFDAAKPAETAPIKVDTWTPPKASEPEESASTGQTFTNAN
ANALTGAIKGDPLQAIATMGADVNLKDFVGQNSCWPADGAELLDAVENQG
CELVVLSSGDPDAYALDEDIKVNRYVRVMGNPAVLPQIDAEDAERAFTVG
PGGLLELQFVRVRQGGGTVRDRYGLEGSGSSSVVGEVRGGCVSVEPGALG
ANFVGVTFIAVANDWDSVQGAIEDQIDFVGGRIYGGHVYVAAGTVNFFGC
NFWDTTLLLPFTDQVSIGGDVLVVAGNAFFTGCTFTATLLFGNFGGAGFN
VAVLGGNAVFTFCVIQAQGVAQSANGAGQILFVGGGTMILTGLDFRFAAP
ILFFSGIGDFFVGGGVMIFTGVTIENTYPILAAYGAGFYLAVGGGVMVET
GVTYVQFNCPAHQGLTGASIFTGAGVSIHVGVPASFYGTTVLFTGQGGFS
YNGAGYSLWLGSPIAIFLATFAFFGLGGLTSQPAGFMVYLGCPAFLPAAL
VYFAGLGAVMYLGAGGAVIGGSPVFAPAFKFYSSPEGVANYYVQGNGDAP
NNGIGYYDKNTSIIATPVPKIKPNKTRILATEEDFHNEVRKLRAERRLSV
SAVSDLLFNFMDADGGVSFLGADLKRHRVPILR back to topmRNA from alignment at CM002468.1:840036..842324- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6580 ID=rna6580|Name=rna6580|organism=Nannochloropsis gaditana|type=mRNA|length=2289bp|location=Sequence derived from alignment at CM002468.1:840036..842324- (Nannochloropsis gaditana)
ATGCCTGCCGAAGGATTACGCGCTCGCCGCTATGTTTATGGCGGTCTCTT
GGCCGCCGTTGGCGTGGCTGTAGCTCTGGCCCTCGTCTTTACTGTGGGTG
GTGCTGGCCAGAAAGACAAGGCCGCTGTCGCCTCGGAGCCGAATGTGGCC
TCCCTCGACACTGACGTTAATATTAAGGATGTTTTCGACGCTGCCAAGCC
CGCCGAAACTGCCCCTATCAAGGTCGATACCTGGACCCCGCCTAAGGCTT
CGGAGCCTGAAGAATCTGCGAGCACCGGCCAGACATTCACTAATGTAAGT
AGTGCGAAGGATGAGTCGAAGGCTGAGAGGTTCCCGTTCAGTGCTCACAC
GATCTCCTTTTTCTCTATTGTAGGCCAACGCCAATGCCCTCACCGGCGCA
ATCAAGGGCGACCCCTTGCAGGCTATCGCGACCATGGGTGCTGATGTTAA
TCTGAAGGATTTCGTGGGCCAGAACTCCTGCTGGCCTGCGGATGGTGCTG
AGCTCTTGGACGCTGTCGAGAACCAGGGCTGTGAATTGGTTGTCTTGAGC
AGCGGTGACCCCGATGCCTATGCTCTTGACGAAGATATTAAGGTGAACCG
TTACGTCCGCGTGATGGGCAATCCCGCCGTGCTTCCTCAGATCGATGCGG
AGGACGCCGAACGTGCCTTCACTGTCGGGCCCGGGGGTCTCCTTGAGCTG
CAGTTTGTCCGTGTCCGACAGGGCGGGGGGACCGTGCGCGACCGCTACGG
CTTGGAGGGCTCGGGCTCCTCCTCTGTGGTGGGCGAGGTCCGTGGTGGCT
GTGTGTCGGTGGAGCCGGGGGCTCTGGGGGCCAACTTTGTGGGCGTGACC
TTCATTGCTGTTGCCAACGATTGGGACTCCGTCCAAGGCGCGATCGAGGA
TCAGATCGACTTTGTCGGTGGGCGAATCTACGGTGGCCACGTCTACGTCG
CCGCCGGGACTGTCAACTTCTTCGGCTGCAACTTCTGGGACACCACGCTT
CTCCTCCCTTTCACTGACCAGGTCTCTATCGGTGGTGACGTGCTCGTTGT
GGCCGGGAACGCCTTCTTTACCGGCTGCACTTTCACCGCTACCCTTCTCT
TTGGTAACTTCGGTGGCGCGGGTTTCAACGTTGCTGTCTTGGGTGGCAAT
GCCGTCTTTACTTTCTGCGTTATCCAGGCGCAAGGCGTGGCCCAGTCGGC
CAACGGTGCGGGCCAGATCCTTTTCGTGGGTGGCGGGACCATGATCCTTA
CCGGCTTGGACTTCCGATTCGCCGCCCCCATCCTCTTCTTTAGTGGTATC
GGCGATTTCTTTGTCGGCGGTGGTGTAATGATTTTCACGGGTGTCACGAT
CGAGAACACGTACCCCATCCTTGCTGCCTATGGCGCTGGTTTCTACCTGG
CTGTCGGTGGTGGCGTCATGGTCGAGACCGGGGTCACCTACGTCCAGTTC
AATTGCCCCGCTCACCAAGGCCTCACGGGTGCTTCCATCTTTACGGGCGC
GGGTGTTTCCATCCACGTCGGTGTCCCCGCGTCCTTCTACGGTACCACTG
TCCTCTTCACGGGCCAGGGTGGATTCTCGTACAACGGTGCCGGCTACTCT
CTGTGGTTGGGCAGCCCCATTGCGATTTTCCTGGCCACCTTCGCCTTCTT
TGGCTTGGGTGGGCTCACCTCCCAGCCCGCCGGTTTCATGGTGTACTTGG
GATGCCCCGCTTTCCTGCCCGCCGCGCTCGTCTACTTCGCCGGCCTGGGT
GCGGTCATGTACTTGGGTGCCGGAGGTGCTGTCATTGGTGGCTCCCCCGT
TTTCGCTCCCGCCTTCAAATTCTACAGCTCTCCCGAGGGCGTGGCCAACT
ACTACGTCCAAGGCAACGGCGATGCCCCCAACAATGGCATCGGCTACTAC
GACAAGAACACGAGCATCATCGCCACGCCCGTGCCCAAGATCAAGCCCAA
CAAGACGCGCATCCTGGCGACCGAGGAGGACTTCCACAACGAGGTCCGCA
AGCTCCGGGCCGAGCGCCGCCTGTCCGTCTCGGCGGTCAGCGACCTCCTC
TTCAACTTTATGGACGCCGACGGCGGCGTCAGCTTCTTGGGCGCGGACCT
GAAGGTACAGCCCTACATCGACCTGGGCAACAACGAGGTTGTCAAGGAGC
TGTCCAGCTGGGTGCCCGCTGGGATCCTGCAGGGCGCCAAGGACATTGGC
CTCCTGAACAAGTTTGGCTCGGAGGTGGGCCGCGGGCCCCTCCTGGAGAT
GCAGGCGGACAGCGTCACCGAGTGCCAATTCTGCGGTGA back to topCoding sequence (CDS) from alignment at CM002468.1:840036..842324- >rna6580 ID=rna6580|Name=rna6580|organism=Nannochloropsis gaditana|type=CDS|length=6156bp|location=Sequence derived from alignment at CM002468.1:840036..842324- (Nannochloropsis gaditana)
CGTCACCGAGTGCCAATTCTGCGGTGAGCCAACGCCAATGCCCTCACCGG
CGCAATCAAGGGCGACCCCTTGCAGGCTATCGCGACCATGGGTGCTGATG
TTAATCTGAAGGATTTCGTGGGCCAGAACTCCTGCTGGCCTGCGGATGGT
GCTGAGCTCTTGGACGCTGTCGAGAACCAGGGCTGTGAATTGGTTGTCTT
GAGCAGCGGTGACCCCGATGCCTATGCTCTTGACGAAGATATTAAGGTGA
ACCGTTACGTCCGCGTGATGGGCAATCCCGCCGTGCTTCCTCAGATCGAT
GCGGAGGACGCCGAACGTGCCTTCACTGTCGGGCCCGGGGGTCTCCTTGA
GCTGCAGTTTGTCCGTGTCCGACAGGGCGGGGGGACCGTGCGCGACCGCT
ACGGCTTGGAGGGCTCGGGCTCCTCCTCTGTGGTGGGCGAGGTCCGTGGT
GGCTGTGTGTCGGTGGAGCCGGGGGCTCTGGGGGCCAACTTTGTGGGCGT
GACCTTCATTGCTGTTGCCAACGATTGGGACTCCGTCCAAGGCGCGATCG
AGGATCAGATCGACTTTGTCGGTGGGCGAATCTACGGTGGCCACGTCTAC
GTCGCCGCCGGGACTGTCAACTTCTTCGGCTGCAACTTCTGGGACACCAC
GCTTCTCCTCCCTTTCACTGACCAGGTCTCTATCGGTGGTGACGTGCTCG
TTGTGGCCGGGAACGCCTTCTTTACCGGCTGCACTTTCACCGCTACCCTT
CTCTTTGGTAACTTCGGTGGCGCGGGTTTCAACGTTGCTGTCTTGGGTGG
CAATGCCGTCTTTACTTTCTGCGTTATCCAGGCGCAAGGCGTGGCCCAGT
CGGCCAACGGTGCGGGCCAGATCCTTTTCGTGGGTGGCGGGACCATGATC
CTTACCGGCTTGGACTTCCGATTCGCCGCCCCCATCCTCTTCTTTAGTGG
TATCGGCGATTTCTTTGTCGGCGGTGGTGTAATGATTTTCACGGGTGTCA
CGATCGAGAACACGTACCCCATCCTTGCTGCCTATGGCGCTGGTTTCTAC
CTGGCTGTCGGTGGTGGCGTCATGGTCGAGACCGGGGTCACCTACGTCCA
GTTCAATTGCCCCGCTCACCAAGGCCTCACGGGTGCTTCCATCTTTACGG
GCGCGGGTGTTTCCATCCACGTCGGTGTCCCCGCGTCCTTCTACGGTACC
ACTGTCCTCTTCACGGGCCAGGGTGGATTCTCGTACAACGGTGCCGGCTA
CTCTCTGTGGTTGGGCAGCCCCATTGCGATTTTCCTGGCCACCTTCGCCT
TCTTTGGCTTGGGTGGGCTCACCTCCCAGCCCGCCGGTTTCATGGTGTAC
TTGGGATGCCCCGCTTTCCTGCCCGCCGCGCTCGTCTACTTCGCCGGCCT
GGGTGCGGTCATGTACTTGGGTGCCGGAGGTGCTGTCATTGGTGGCTCCC
CCGTTTTCGCTCCCGCCTTCAAATTCTACAGCTCTCCCGAGGGCGTGGCC
AACTACTACGTCCAAGGCAACGGCGATGCCCCCAACAATGGCATCGGCTA
CTACGACAAGAACACGAGCATCATCGCCACGCCCGTGCCCAAGATCAAGC
CCAACAAGACGCGCATCCTGGCGACCGAGGAGGACTTCCACAACGAGGTC
CGCAAGCTCCGGGCCGAGCGCCGCCTGTCCGTCTCGGCGGTCAGCGACCT
CCTCTTCAACTTTATGGACGCCGACGGCGGCGTCAGCTTCTTGGGCGCGG
ACCTGAAGATGCCTGCCGAAGGATTACGCGCTCGCCGCTATGTTTATGGC
GGTCTCTTGGCCGCCGTTGGCGTGGCTGTAGCTCTGGCCCTCGTCTTTAC
TGTGGGTGGTGCTGGCCAGAAAGACAAGGCCGCTGTCGCCTCGGAGCCGA
ATGTGGCCTCCCTCGACACTGACGTTAATATTAAGGATGTTTTCGACGCT
GCCAAGCCCGCCGAAACTGCCCCTATCAAGGTCGATACCTGGACCCCGCC
TAAGGCTTCGGAGCCTGAAGAATCTGCGAGCACCGGCCAGACATTCACTA
ATCGTCACCGAGTGCCAATTCTGCGGTGAGCCAACGCCAATGCCCTCACC
GGCGCAATCAAGGGCGACCCCTTGCAGGCTATCGCGACCATGGGTGCTGA
TGTTAATCTGAAGGATTTCGTGGGCCAGAACTCCTGCTGGCCTGCGGATG
GTGCTGAGCTCTTGGACGCTGTCGAGAACCAGGGCTGTGAATTGGTTGTC
TTGAGCAGCGGTGACCCCGATGCCTATGCTCTTGACGAAGATATTAAGGT
GAACCGTTACGTCCGCGTGATGGGCAATCCCGCCGTGCTTCCTCAGATCG
ATGCGGAGGACGCCGAACGTGCCTTCACTGTCGGGCCCGGGGGTCTCCTT
GAGCTGCAGTTTGTCCGTGTCCGACAGGGCGGGGGGACCGTGCGCGACCG
CTACGGCTTGGAGGGCTCGGGCTCCTCCTCTGTGGTGGGCGAGGTCCGTG
GTGGCTGTGTGTCGGTGGAGCCGGGGGCTCTGGGGGCCAACTTTGTGGGC
GTGACCTTCATTGCTGTTGCCAACGATTGGGACTCCGTCCAAGGCGCGAT
CGAGGATCAGATCGACTTTGTCGGTGGGCGAATCTACGGTGGCCACGTCT
ACGTCGCCGCCGGGACTGTCAACTTCTTCGGCTGCAACTTCTGGGACACC
ACGCTTCTCCTCCCTTTCACTGACCAGGTCTCTATCGGTGGTGACGTGCT
CGTTGTGGCCGGGAACGCCTTCTTTACCGGCTGCACTTTCACCGCTACCC
TTCTCTTTGGTAACTTCGGTGGCGCGGGTTTCAACGTTGCTGTCTTGGGT
GGCAATGCCGTCTTTACTTTCTGCGTTATCCAGGCGCAAGGCGTGGCCCA
GTCGGCCAACGGTGCGGGCCAGATCCTTTTCGTGGGTGGCGGGACCATGA
TCCTTACCGGCTTGGACTTCCGATTCGCCGCCCCCATCCTCTTCTTTAGT
GGTATCGGCGATTTCTTTGTCGGCGGTGGTGTAATGATTTTCACGGGTGT
CACGATCGAGAACACGTACCCCATCCTTGCTGCCTATGGCGCTGGTTTCT
ACCTGGCTGTCGGTGGTGGCGTCATGGTCGAGACCGGGGTCACCTACGTC
CAGTTCAATTGCCCCGCTCACCAAGGCCTCACGGGTGCTTCCATCTTTAC
GGGCGCGGGTGTTTCCATCCACGTCGGTGTCCCCGCGTCCTTCTACGGTA
CCACTGTCCTCTTCACGGGCCAGGGTGGATTCTCGTACAACGGTGCCGGC
TACTCTCTGTGGTTGGGCAGCCCCATTGCGATTTTCCTGGCCACCTTCGC
CTTCTTTGGCTTGGGTGGGCTCACCTCCCAGCCCGCCGGTTTCATGGTGT
ACTTGGGATGCCCCGCTTTCCTGCCCGCCGCGCTCGTCTACTTCGCCGGC
CTGGGTGCGGTCATGTACTTGGGTGCCGGAGGTGCTGTCATTGGTGGCTC
CCCCGTTTTCGCTCCCGCCTTCAAATTCTACAGCTCTCCCGAGGGCGTGG
CCAACTACTACGTCCAAGGCAACGGCGATGCCCCCAACAATGGCATCGGC
TACTACGACAAGAACACGAGCATCATCGCCACGCCCGTGCCCAAGATCAA
GCCCAACAAGACGCGCATCCTGGCGACCGAGGAGGACTTCCACAACGAGG
TCCGCAAGCTCCGGGCCGAGCGCCGCCTGTCCGTCTCGGCGGTCAGCGAC
CTCCTCTTCAACTTTATGGACGCCGACGGCGGCGTCAGCTTCTTGGGCGC
GGACCTGAAGATGCCTGCCGAAGGATTACGCGCTCGCCGCTATGTTTATG
GCGGTCTCTTGGCCGCCGTTGGCGTGGCTGTAGCTCTGGCCCTCGTCTTT
ACTGTGGGTGGTGCTGGCCAGAAAGACAAGGCCGCTGTCGCCTCGGAGCC
GAATGTGGCCTCCCTCGACACTGACGTTAATATTAAGGATGTTTTCGACG
CTGCCAAGCCCGCCGAAACTGCCCCTATCAAGGTCGATACCTGGACCCCG
CCTAAGGCTTCGGAGCCTGAAGAATCTGCGAGCACCGGCCAGACATTCAC
TAATCGTCACCGAGTGCCAATTCTGCGGTGAGCCAACGCCAATGCCCTCA
CCGGCGCAATCAAGGGCGACCCCTTGCAGGCTATCGCGACCATGGGTGCT
GATGTTAATCTGAAGGATTTCGTGGGCCAGAACTCCTGCTGGCCTGCGGA
TGGTGCTGAGCTCTTGGACGCTGTCGAGAACCAGGGCTGTGAATTGGTTG
TCTTGAGCAGCGGTGACCCCGATGCCTATGCTCTTGACGAAGATATTAAG
GTGAACCGTTACGTCCGCGTGATGGGCAATCCCGCCGTGCTTCCTCAGAT
CGATGCGGAGGACGCCGAACGTGCCTTCACTGTCGGGCCCGGGGGTCTCC
TTGAGCTGCAGTTTGTCCGTGTCCGACAGGGCGGGGGGACCGTGCGCGAC
CGCTACGGCTTGGAGGGCTCGGGCTCCTCCTCTGTGGTGGGCGAGGTCCG
TGGTGGCTGTGTGTCGGTGGAGCCGGGGGCTCTGGGGGCCAACTTTGTGG
GCGTGACCTTCATTGCTGTTGCCAACGATTGGGACTCCGTCCAAGGCGCG
ATCGAGGATCAGATCGACTTTGTCGGTGGGCGAATCTACGGTGGCCACGT
CTACGTCGCCGCCGGGACTGTCAACTTCTTCGGCTGCAACTTCTGGGACA
CCACGCTTCTCCTCCCTTTCACTGACCAGGTCTCTATCGGTGGTGACGTG
CTCGTTGTGGCCGGGAACGCCTTCTTTACCGGCTGCACTTTCACCGCTAC
CCTTCTCTTTGGTAACTTCGGTGGCGCGGGTTTCAACGTTGCTGTCTTGG
GTGGCAATGCCGTCTTTACTTTCTGCGTTATCCAGGCGCAAGGCGTGGCC
CAGTCGGCCAACGGTGCGGGCCAGATCCTTTTCGTGGGTGGCGGGACCAT
GATCCTTACCGGCTTGGACTTCCGATTCGCCGCCCCCATCCTCTTCTTTA
GTGGTATCGGCGATTTCTTTGTCGGCGGTGGTGTAATGATTTTCACGGGT
GTCACGATCGAGAACACGTACCCCATCCTTGCTGCCTATGGCGCTGGTTT
CTACCTGGCTGTCGGTGGTGGCGTCATGGTCGAGACCGGGGTCACCTACG
TCCAGTTCAATTGCCCCGCTCACCAAGGCCTCACGGGTGCTTCCATCTTT
ACGGGCGCGGGTGTTTCCATCCACGTCGGTGTCCCCGCGTCCTTCTACGG
TACCACTGTCCTCTTCACGGGCCAGGGTGGATTCTCGTACAACGGTGCCG
GCTACTCTCTGTGGTTGGGCAGCCCCATTGCGATTTTCCTGGCCACCTTC
GCCTTCTTTGGCTTGGGTGGGCTCACCTCCCAGCCCGCCGGTTTCATGGT
GTACTTGGGATGCCCCGCTTTCCTGCCCGCCGCGCTCGTCTACTTCGCCG
GCCTGGGTGCGGTCATGTACTTGGGTGCCGGAGGTGCTGTCATTGGTGGC
TCCCCCGTTTTCGCTCCCGCCTTCAAATTCTACAGCTCTCCCGAGGGCGT
GGCCAACTACTACGTCCAAGGCAACGGCGATGCCCCCAACAATGGCATCG
GCTACTACGACAAGAACACGAGCATCATCGCCACGCCCGTGCCCAAGATC
AAGCCCAACAAGACGCGCATCCTGGCGACCGAGGAGGACTTCCACAACGA
GGTCCGCAAGCTCCGGGCCGAGCGCCGCCTGTCCGTCTCGGCGGTCAGCG
ACCTCCTCTTCAACTTTATGGACGCCGACGGCGGCGTCAGCTTCTTGGGC
GCGGACCTGAAGATGCCTGCCGAAGGATTACGCGCTCGCCGCTATGTTTA
TGGCGGTCTCTTGGCCGCCGTTGGCGTGGCTGTAGCTCTGGCCCTCGTCT
TTACTGTGGGTGGTGCTGGCCAGAAAGACAAGGCCGCTGTCGCCTCGGAG
CCGAATGTGGCCTCCCTCGACACTGACGTTAATATTAAGGATGTTTTCGA
CGCTGCCAAGCCCGCCGAAACTGCCCCTATCAAGGTCGATACCTGGACCC
CGCCTAAGGCTTCGGAGCCTGAAGAATCTGCGAGCACCGGCCAGACATTC
ACTAAT back to top
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