rna658, rna658 (mRNA) Nannochloropsis gaditana

Overview
Namerna658
Unique Namerna658
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length309
Alignment locationCM002456.1:98722..99261 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100802g1.3721.mrna
Orig protein idgnl|cribi|Naga_100802g1.3721
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:98722..99261 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100802g1gene631Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna658rna658-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM30012.1cds658Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna658 ID=rna658|Name=rna658|organism=Nannochloropsis gaditana|type=mRNA|length=309bp
ATGCAGACGAAGCGGATCAACGGGGCGTCACGCACAACTTATGACGGCAT
TAATCCGAAGCCACCCCGGGCATTGACTGACGTCCACCGGGGAATTTCTA
GGTTCTCTGACCGTCGCTGGAACAACACGCACGTGCAAATAATTATGCCC
GCATCCTTATGGGAATGGGCGGTATGGCGGTCGTTTTTGCAACATTTTGT
CCGGACTTGGTTCATCAAGCTGCAGCGAAATATGTTCCTTGTTGTCATTG
AAGTGCCTTCCCCTCCTTTATCTCGACCCCTGCTTCCATCCGTACATGTT
GTGAAATGA
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protein sequence of rna658

>rna658-protein ID=rna658-protein|Name=rna658|organism=Nannochloropsis gaditana|type=polypeptide|length=120bp
MSASFRPTQAFCRLFLGSLALMMLLRSSASFLVRSTRNGTPMSILNAQRR
GGAVSARAVSSSFHRGRSVFASVDLGGGVVTRLDKARDVFGDKQTKKSWD
YVAHHPCYEMVKSEVVQERR
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mRNA from alignment at CM002456.1:98722..99261-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna658 ID=rna658|Name=rna658|organism=Nannochloropsis gaditana|type=mRNA|length=540bp|location=Sequence derived from alignment at CM002456.1:98722..99261- (Nannochloropsis gaditana)
ATGAGCGCAAGCTTTCGTCCCACTCAGGCCTTCTGTCGCCTTTTTCTCGG
CTCCCTTGCCCTCATGATGCTACTTCGATCCTCAGCTTCGTTTCTAGTGC
GCAGCACCCGCAATGGCACCCCCATGTCCATCCTGAACGCCCAGCGTCGT
GGTGGTGCGGTCTCAGCGCGTGCCGTGTCTTCCTCTTTCCACCGGGGCCG
GTCTGTCTTCGCCTCCGTGGATCTGGGCGGAGGTGTGGTCACGCGCTTGG
ACAAGGCACGTGACGTATTTGGGGACAAGCAAACAAAAAAATCCTGGGAC
TACGTGGCGCATCATCCTTGGTACGACAGGATGGATGAGGTTTGGGAGGG
AATAGTCTGGAAGGGCCTTGCTGCGAAGCGAGGCTTCTGCTCATATTTCT
CCCTCCCTCCCCTCCTCCCTCCCTCCCTCCCTCCCTCCCTCGGGCCCTCC
CCAGCTATGAAATGGTGAAGTCTGAAGTTGTGCAGGAGTACGGTGCCAAG
GTCACGCTGTACCGGCACCGGCAGACACAGACGGAGGTGA
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Coding sequence (CDS) from alignment at CM002456.1:98722..99261-

>rna658 ID=rna658|Name=rna658|organism=Nannochloropsis gaditana|type=CDS|length=1089bp|location=Sequence derived from alignment at CM002456.1:98722..99261- (Nannochloropsis gaditana)
ACGGAGGTGACTATGAAATGGTGAAGTCTGAAGTTGTGCAGGAATGAGCG
CAAGCTTTCGTCCCACTCAGGCCTTCTGTCGCCTTTTTCTCGGCTCCCTT
GCCCTCATGATGCTACTTCGATCCTCAGCTTCGTTTCTAGTGCGCAGCAC
CCGCAATGGCACCCCCATGTCCATCCTGAACGCCCAGCGTCGTGGTGGTG
CGGTCTCAGCGCGTGCCGTGTCTTCCTCTTTCCACCGGGGCCGGTCTGTC
TTCGCCTCCGTGGATCTGGGCGGAGGTGTGGTCACGCGCTTGGACAAGGC
ACGTGACGTATTTGGGGACAAGCAAACAAAAAAATCCTGGGACTACGTGG
CGCATCATCCTTGACGGAGGTGACTATGAAATGGTGAAGTCTGAAGTTGT
GCAGGAATGAGCGCAAGCTTTCGTCCCACTCAGGCCTTCTGTCGCCTTTT
TCTCGGCTCCCTTGCCCTCATGATGCTACTTCGATCCTCAGCTTCGTTTC
TAGTGCGCAGCACCCGCAATGGCACCCCCATGTCCATCCTGAACGCCCAG
CGTCGTGGTGGTGCGGTCTCAGCGCGTGCCGTGTCTTCCTCTTTCCACCG
GGGCCGGTCTGTCTTCGCCTCCGTGGATCTGGGCGGAGGTGTGGTCACGC
GCTTGGACAAGGCACGTGACGTATTTGGGGACAAGCAAACAAAAAAATCC
TGGGACTACGTGGCGCATCATCCTTGACGGAGGTGACTATGAAATGGTGA
AGTCTGAAGTTGTGCAGGAATGAGCGCAAGCTTTCGTCCCACTCAGGCCT
TCTGTCGCCTTTTTCTCGGCTCCCTTGCCCTCATGATGCTACTTCGATCC
TCAGCTTCGTTTCTAGTGCGCAGCACCCGCAATGGCACCCCCATGTCCAT
CCTGAACGCCCAGCGTCGTGGTGGTGCGGTCTCAGCGCGTGCCGTGTCTT
CCTCTTTCCACCGGGGCCGGTCTGTCTTCGCCTCCGTGGATCTGGGCGGA
GGTGTGGTCACGCGCTTGGACAAGGCACGTGACGTATTTGGGGACAAGCA
AACAAAAAAATCCTGGGACTACGTGGCGCATCATCCTTG
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Synonyms
Publications