rna6569, rna6569 (mRNA) Nannochloropsis gaditana

Overview
Namerna6569
Unique Namerna6569
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length918
Alignment locationCM002468.1:816138..816968 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102483g1.1267.mrna
Orig protein idgnl|cribi|Naga_102483g1.1267
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:816138..816968 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102483g1gene6349Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6569rna6569-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24120.1cds6553Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6569 ID=rna6569|Name=rna6569|organism=Nannochloropsis gaditana|type=mRNA|length=918bp
TCCCTCCCTCCCTCCCTTCCTCCCTCCTTCCCTCCCTCCCTATCTCCCTC
AGCTTGCAGGCCCCTTGCTGGGCCGCATGGCAGCCCTCGCCAAGTGGTTC
ATCGAGTGGAGCAAGCTGCGGGAGGTTCGAGGCTGTCGGGCTTCAAGTTG
GTTTTGGCGCGTTATTGCTCATCCCCTCACTTTTTTCCTTCACCGCTACC
TGGTCCCAGATGGGCGGAGGAGGGGAAGACGAGGCCGGCGGGGCGGGGGG
AGGCGGCGGCGGGGAGGCTCGTTCGACGGAGGGCGGGAGAAGAAAGAAGC
CTAAATAGAACCGGAAACGACGTGGTGGGGTCGCGCAGGCGGGGTGGGTG
GGGTGAACACAAGACGTACGGCTAGGAAATCCCCGGGGGGGGGGGGGAAT
AGGACCGTGGGAGAAGGCGGGCGTGTATGGGCAGCACGCGGGAAGGCGGT
GAACGGGTGGCTCGTGTCGTGCCTCTGACCGTGCCCAGTCCAGCCAGCCC
TTCGGTCCACAAGCTGAAAAAAGAGGGTGGGATGCAGGGCGCTCCGACCG
CGCGGTGCAGTTGTCGCCTCGGTGGCGGGCGTGTGGGAAGTAGAACAAGG
ACTGGGGGAGGGGTCAGGCCGATGCGGAGGCGGCGAGGGAGGGCCCACAG
AGGGAGGTGCGTCGTCCTCCCGGCGTGAGGAGAGTGGTCAGAAAGAACGA
AGCCGCCGCTGTCGCCGTGTATCGTGCCTGGAGGCCCGAACGGGAGGACC
GGATGCTACCCGGATGTGAGGATCAGGCATTGAATAGGGGCTGGTCAGGC
CCAAGGAGGCAGGGCTCGAGGGAGCCTTTAGGATCTGAAAAGGAATCGGG
GGCGGACGTGCGGTGCACGCAGCGAGCGCCACGGTTTAAAAAGCGAAACC
AACCACTTGTATAACTGT
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protein sequence of rna6569

>rna6569-protein ID=rna6569-protein|Name=rna6569|organism=Nannochloropsis gaditana|type=polypeptide|length=195bp
FFLLRGHRRISPCSSVSCLPSLVSPSPSSLFATGIEASSGWLLTDSRLRV
SSLPSSLPSSLPPSLPPSLVLAAGDVTDRPGGDDKTAFAAELQAEAAARQ
VLSSLALSPTSSAPPSAPPSLPPSLPDWTYPTALTGDTMAPFIYCLSLGP
YEGILVFNDLVVRREGGGPGGRAGRRTRKGGRRHSFRVGMTGAGD
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mRNA from alignment at CM002468.1:816138..816968-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6569 ID=rna6569|Name=rna6569|organism=Nannochloropsis gaditana|type=mRNA|length=831bp|location=Sequence derived from alignment at CM002468.1:816138..816968- (Nannochloropsis gaditana)
CTTCTTCCTCTTGCGAGGCCATCGCCGGATTTCTCCTTGCTCCTCTGTCT
CATGTCTCCCCTCCCTCGTCTCCCCCTCCCCCTCCTCCCTTTTTGCCACA
GGGATCGAAGCCTCCAGTGGCTGGCTTCTGACAGACAGCCGCCTTCGCGT
GTCCTCTCTCCCTTCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCGTCCTCGCTGCAGGCGACGTGACGGATAGGCCGGGCGGGGAC
GACAAGACGGCGTTCGCCGCCGAGCTCCAGGCGGAAGCTGCCGCGAGACA
GGTAATGAGGAAGGGAATGAGGGAGGGCGGGAAGGAGGGCATGGCAGGGG
GAGAGCGCGATGGCTGGGTTGCGATGCGTCCTATCCTCTCCTGAGTAGGA
AGGAGGAGGCTGTGTTACATTCCTCGTCCTCGACATCCATCGTCTCTGAC
CGTCCCTTTCCCTCCACATTTCCCACACCTTAGGTATTATCGAGCCTGGC
TTTGTCGCCAACGTCCTCCGCCCCGCCCTCCGCCCCGCCCTCCCTTCCGC
CCTCCCTCCCGGACTGGACATACCCCACTGCCTTGACGGGCGACACGATG
GCCCCCTTTATCTATTGCCTGAGCCTGGGGCCGTACGAAGGGATCCTAGT
CTTCAATGACTTGGTGGTGAGGCGGGAGGGAGGGGGGCCGGGAGGGAGGG
CCGGTAGGAGGACGAGGAAGGGGGGGAGGAGGCACTCTTTTCGGGTGGGA
ATGACTGGTGCTGGAGACTGAGAGAGAGGGCACAACAAGGTTGATCGTCC
TTCTCATGTGGCCTTATCCTCTCTCCCTCCC
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Coding sequence (CDS) from alignment at CM002468.1:816138..816968-

>rna6569 ID=rna6569|Name=rna6569|organism=Nannochloropsis gaditana|type=CDS|length=1176bp|location=Sequence derived from alignment at CM002468.1:816138..816968- (Nannochloropsis gaditana)
GTATTATCGAGCCTGGCTTTGTCGCCAACGTCCTCCGCCCCGCCCTCCGC
CCCGCCCTCCCTTCCGCCCTCCCTCCCGGACTGGACATACCCCACTGCCT
TGACGGGCGACACGATGGCCCCCTTTATCTATTGCCTGAGCCTGGGGCCG
TACGAAGGGATCCTAGTCTTCAATGACTTGGTGGTGAGGCGGGAGGGAGG
GGGGCCGGGAGGGAGGGCCGGTAGGAGGACGAGGAAGGGGGGGAGGAGGC
ACTCTTTTCGGGTGGGAATGACTGGTGCTGGAGACTGATTCTTCCTCTTG
CGAGGCCATCGCCGGATTTCTCCTTGCTCCTCTGTCTCATGTCTCCCCTC
CCTCGTCTCCCCCTCCCCCTCCTCCCTTTTTGCCACAGGGATCGAAGCCT
CCAGTGGCTGGCTTCTGACAGACAGCCGCCTTCGCGTGTCCTCTCTCCCT
TCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCGTCCT
CGCTGCAGGCGACGTGACGGATAGGCCGGGCGGGGACGACAAGACGGCGT
TCGCCGCCGAGCTCCAGGCGGAAGCTGCCGCGAGACAGGTATTATCGAGC
CTGGCTTTGTCGCCAACGTCCTCCGCCCCGCCCTCCGCCCCGCCCTCCCT
TCCGCCCTCCCTCCCGGACTGGACATACCCCACTGCCTTGACGGGCGACA
CGATGGCCCCCTTTATCTATTGCCTGAGCCTGGGGCCGTACGAAGGGATC
CTAGTCTTCAATGACTTGGTGGTGAGGCGGGAGGGAGGGGGGCCGGGAGG
GAGGGCCGGTAGGAGGACGAGGAAGGGGGGGAGGAGGCACTCTTTTCGGG
TGGGAATGACTGGTGCTGGAGACTGATTCTTCCTCTTGCGAGGCCATCGC
CGGATTTCTCCTTGCTCCTCTGTCTCATGTCTCCCCTCCCTCGTCTCCCC
CTCCCCCTCCTCCCTTTTTGCCACAGGGATCGAAGCCTCCAGTGGCTGGC
TTCTGACAGACAGCCGCCTTCGCGTGTCCTCTCTCCCTTCCTCCCTCCCT
TCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCGTCCTCGCTGCAGGCGA
CGTGACGGATAGGCCGGGCGGGGACGACAAGACGGCGTTCGCCGCCGAGC
TCCAGGCGGAAGCTGCCGCGAGACAG
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Synonyms
Publications