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Properties
| Property Name | Value |
|---|
| Product | hemk methyltransferase family member 1 |
| Orig transcript id | gnl|cribi|Naga_100391g5.3405.mrna |
| Orig protein id | gnl|cribi|Naga_100391g5.3405 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:94666..96627 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna656 ID=rna656|Name=rna656|organism=Nannochloropsis gaditana|type=mRNA|length=1656bp
ATGAGCGATGAAGCGAGGGCAAACGAGAGGTGTCATCATTATATTTCTTC
CAGCAAAGTTGCAAGAAGGGGCGAGGCCGCGGTGCATGCAAGCTCTCTCC
TACAGCAGCACAAAAAGAAGAAACCGGCGAGGCATTTACTTTCCTGGGAT
AGTCCCGTGCTTTTAACACCGAGTAAAGGAGGCGTAATAGGCCGCGGCGG
ACGTGGGCACTCGGGCCGAGGTGGACCAGGGGTGAACCAAGCAGGACAAG
GCGCCCCTTTTCAATGCAAGCATACCCTGGACGGGACTTGCTCGTGGGGC
CCATCCCGGTGTCGGTACGTGCATGGGGTCGATTTCCATGCCAACGGCGT
GGATTTGGAGGCGCACAAAGGCGCCATCCGAGGCTTGGCCAGCGATGCGA
ACTGCTTGTACACGTTCGGGGAGGACGGAATCATCAAGACATACAGCTGG
ACCCCAGGCACGGGCATCACGGGTTGCAAGGAGCAAAACGGTGGGGGTCC
GGGGAGTTTCTTCACCACCTCCGACCCCACCCACGCCTTCTATTTCTACG
GCTTTCGGCAGCCTTTGGTGCCAGGCCTGAGCTCGGAGACCAGCTTGGTG
GGCCGGGCGCAAATGTTTTTCAACAACGCCTCCACCGACTTGACCGTCTC
GGACGACTGCCCCTACACCGACCCGCGTAAAGTGCTGGCCTGTGTGGCGT
GGGAGATGCCCGCTCCTTCCCCCCCTCATATCTTCACGGCGGGGGAGGAC
GGACGCATCTATTCCTGGTCGTACAACGCCGAACAAGCCCGGTTTGTGGT
GGGGGCGACGTACGTAGGGCACACGCGCCCGGTGACGGCCCTGATCTTGG
CAGCGACCGAAAACCCACCTTTGCTGTACTCGGCGGGCTTAGACGGAACG
ATCCGGTGCTGGAACTGCGCCAGTCATGCCTTGGAATGGACGAGCACGGC
CGTCGGGGTTTTCCGCCGGCTGTCCGAGCCTCCACAGCCACACGAAGGGC
ATGTGGAAGGGATCACGGACATGTGCTCGCTGGTCTGCGAAGGGCAGTCC
TTCCTGGCCACCAGCAGCCAGGATGGGAGCGTGCGGATTTGGAGCATCCA
GGGGGGGAATCTGGGCGTGACCTTACCCCTGGATTTTCCCACGGGCGCAG
CGGTAAAGCTGTGTCAAGTCGCGGCAGGAGGGGAGGGGGGGGGAAGCGAC
CCGGCGGGCTTAGGCCCTCCGTCGTTTTTGGTGGTCGCTTATGAAAGCGG
GCACATGGTTTTCTGGACTTTACCCGGCTTGGAAACCTACTTGGTGATCG
ATCCACCCTACGCGGGGAAACCGGGGGGTAGGGCGGGAGGGCGGGAAGGA
GGTGGGGCCTATGTCACATCCTTGGTCACATTAAATCCGGGTATCATAGC
GACCGGGTCTTCAGACGGCGTATTGAAGGTATGGTCGGTGCATCGCCCTG
CAGTGGGAATAGGAGGGGGAGGGGCGTAAGCCAAAACCGCGGTAAGTTGA
ACCGGTAAGCTTGCTTCAGATCTCTAGGGGAGAGGCTAATGAAAGCCCCG
TGAGGCTTCAAAGAGTCAATGTCTCCAGCGGAGTAGGTAAAGTCTTTCGG
GCGGAACTTGCAGTGTCGCGAAGGTGAAAGAAACAAGTTCTCAACTGGGA
GGAGTT back to topprotein sequence of rna656 >rna656-protein ID=rna656-protein|Name=rna656|organism=Nannochloropsis gaditana|type=polypeptide|length=458bp
MHQTAYVHTTSFPVLPFFESPTENDGHPLSLLFLFSHISLLSFRFIHLCS
VFLLFLPLLLLLLLLLLLLLLLLLLPLFVSSIFATPFSGTIAASLAWATS
FLLDHNVPDAALSAEYLLLHALHYPPSTPRRVLHERVSEGSEEKGENVVP
PDTRAAFQSLLYRHGIKREPVQYLVGGWDFHRIHLALAPPVLIPRPETEE
LVEWVLEEEGREEGEEGGGGGGPNLPIRFLDVGCGSGAIGLALLWAYRDA
WPSRDVTCVALDPHPAAVALAKANAARLGFPPSAYQVVQGALGEDKGEGG
EEGEKEGGVVASLLGAGGLKGGSIEGEWETKRRKKFDFIVANPPYIPDAD
MGRLQPEVKDWEDPGALAGGGDDGTRIIRAILRAAPRLLEPNRIGMKKAK
VWMEVDASHPLLFAKEEEEKERRKVGGELRLMEWRKDLSGKPRFCCWALN
ESPKDADS back to topmRNA from alignment at CM002456.1:94666..96627+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna656 ID=rna656|Name=rna656|organism=Nannochloropsis gaditana|type=mRNA|length=1962bp|location=Sequence derived from alignment at CM002456.1:94666..96627+ (Nannochloropsis gaditana)
ATGCACCAGACAGCCTATGTCCACACCACGTCGTTCCCtgttcttccctt
cttcgaATCTCCGACAGAAAATGACGGCCATCCCttgtcccttctctttc
tcttctctcatATCTCATTActctccttccgcttcaTCCACCTATGctcc
gtctttctcctcttcctccctttgctcctcctcctcctcctcctcctcct
cctcctcctcctcctcctcctcctccccctcttcgtctcctccatctttg
cCACCCCCTTCTCTGGGACAATAGCCGCCTCTTTGGCATGGGCCacatct
ttcctcctcgaccacaACGTCCCCGACGCCGCCCTCTCTGCCGAATACCT
ACTGCTTCACGCCCTCCACTACCCGCCATCAACGCCGCGGCGGGTCCTTC
ATGAACGGGTCTCCGAGGGAagtgaagagaaaggggaaaatgtTGTACCC
CCAGGTATGTCCTCAACCTTCCTTGTGCGAGATTATCATGCAAGGGCCGG
GCGGGATGTAtcttcatcttttctccccctccccctccccccccttgacc
cTCTCAGACACCCGGGCTGCCTTTCAATCCTTGTTATACCGACATGGAAT
TAAGCGGGAGCCAGTGCAGTATTTGGTGGGAGGTTGGGATTTCCATCGCA
TCCATTTAGCCCTGGCGCCCCCCGTCCTGATACCAAGGCCTGAGACCGAA
GAGCTCGTGGAGTgggtcctggaggaggaagggagggaggaaggggaaga
gggagggggagggggaggaccaaATCTTCCGATCCGGTTTTTGGACGTGG
GTTGTGGGAGCGGGGCGATCGGCTTGGCTTTACTCTGGGCTTACAGGGAC
GCGTGGCCGTcaaggtgagagggagggagggaggagggagggagagagga
cggaaGGATGCGAACAAGAAAGTATTATGAAAAATGGGTCATACTCCGTC
AGTATTTGTGAGAAAAAAAGGCACCAGGCAACTGATACCCGACTGAAGTC
TCCGTGTCCAGTCcaacgtccctccctccttcctttcctccctccatccc
tccctccctccctccctccgtcgcagAGACGTCACTTGCGTGGCCCTAGA
TCCGCATCCTGCTGCAGTCGCTCTTGCAAAGGCGAATGCTGCTCGACTGg
gtttccctccatccgcttACCAGGTCGTGCAGGGCGCGCtaggggaggac
aagggggagggaggggaggagggagagaaggagggaggggtggtggcaAG
CCTCTTGGGGGCCGGAGGCTTGAAAGGAGGCAGTATagagggggaatggg
aaaCGAAGAGGCGCAAAAAATTCGACTTCATTGTCGCGAACCCTCCGTAC
ATCCCCGACGCGGATATGGGCCGGCTTCAGGTAAGGACCCGAGTGAGGAT
GGGGAACGAGTTATAAGGCCCCCGGCGTATGCCTAGCCTGTGATGGGGCA
CAAGTGCGGGAGAATTGCTGAGTGTGGTTGTTCCCGGGCGTTCTCTCTTC
GGGTTGCGTGGTGTGGTAGGCCCATAGGTTTGGGGGGATGGTGTGGCCAT
GGAACGAGCTGAGCaagtgagaggaggggggggcagggaaataCTGGCTG
GATCTTTGACTGTTTTGATTCACTTTCCGCTTGTTCAATCCCACGATCAG
CCTGAAGTCAAGGACTGGGAGGACCCAGGTGCTTtggcaggcggaggcga
cgACGGAACTCGAATAATCAGGGCGATACTGCGAGCTGCCCCGCGATTGC
TTGAACCGAATCGCATAGGGATGAAAAAAGCGAAGGTATGGATGGAAGTA
GATGCGAGccacccccttcttttcgcgaaggaggaagaagaaaaggagag
gaggaaagtgggagGAGAATTGCGGCTGATGGAATGGCGGAAAGACCTCT
CTGGTAAGCCGCGTTTCTGTTGCTGGGCACTGAATGAATCTCCGAAAGAT
GCGGATTCATGA back to topCoding sequence (CDS) from alignment at CM002456.1:94666..96627+ >rna656 ID=rna656|Name=rna656|organism=Nannochloropsis gaditana|type=CDS|length=5508bp|location=Sequence derived from alignment at CM002456.1:94666..96627+ (Nannochloropsis gaditana)
ATGCACCAGACAGCCTATGTCCACACCACGTCGTTCCCtgttcttccctt
cttcgaATCTCCGACAGAAAATGACGGCCATCCCttgtcccttctctttc
tcttctctcatATCTCATTActctccttccgcttcaTCCACCTATGctcc
gtctttctcctcttcctccctttgctcctcctcctcctcctcctcctcct
cctcctcctcctcctcctcctcctccccctcttcgtctcctccatctttg
cCACCCCCTTCTCTGGGACAATAGCCGCCTCTTTGGCATGGGCCacatct
ttcctcctcgaccacaACGTCCCCGACGCCGCCCTCTCTGCCGAATACCT
ACTGCTTCACGCCCTCCACTACCCGCCATCAACGCCGCGGCGGGTCCTTC
ATGAACGGGTCTCCGAGGGAagtgaagagaaaggggaaaatgtTGTACCC
CCAGACACCCGGGCTGCCTTTCAATCCTTGTTATACCGACATGGAATTAA
GCGGGAGCCAGTGCAGTATTTGGTGGGAGGTTGGGATTTCCATCGCATCC
ATTTAGCCCTGGCGCCCCCCGTCCTGATACCAAGGCCTGAGACCGAAGAG
CTCGTGGAGTgggtcctggaggaggaagggagggaggaaggggaagaggg
agggggagggggaggaccaaATCTTCCGATCCGGTTTTTGGACGTGGGTT
GTGGGAGCGGGGCGATCGGCTTGGCTTTACTCTGGGCTTACAGGGACGCG
TGGCCGTcaagAGACGTCACTTGCGTGGCCCTAGATCCGCATCCTGCTGC
AGTCGCTCTTGCAAAGGCGAATGCTGCTCGACTGggtttccctccatccg
cttACCAGGTCGTGCAGGGCGCGCtaggggaggacaagggggagggaggg
gaggagggagagaaggagggaggggtggtggcaAGCCTCTTGGGGGCCGG
AGGCTTGAAAGGAGGCAGTATagagggggaatgggaaaCGAAGAGGCGCA
AAAAATTCGACTTCATTGTCGCGAACCCTCCGTACATCCCCGACGCGGAT
ATGGGCCGGCTTCAGCCTGAAGTCAAGGACTGGGAGGACCCAGGTGCTTt
ggcaggcggaggcgacgACGGAACTCGAATAATCAGGGCGATACTGCGAG
CTGCCCCGCGATTGCTTGAACCGAATCGCATAGGGATGAAAAAAGCGAAG
GTATGGATGGAAGTAGATGCGAGccacccccttcttttcgcgaaggagga
agaagaaaaggagaggaggaaagtgggagGAGAATTGCGGCTGATGGAAT
GGCGGAAAGACCTCTCTGGTAAGCCGCGTTTCTGTTGCTGGGCACTGAAT
GAATCTCCGAAAGATGCGGATTCATGAATGCACCAGACAGCCTATGTCCA
CACCACGTCGTTCCCtgttcttcccttcttcgaATCTCCGACAGAAAATG
ACGGCCATCCCttgtcccttctctttctcttctctcatATCTCATTActc
tccttccgcttcaTCCACCTATGctccgtctttctcctcttcctcccttt
gctcctcctcctcctcctcctcctcctcctcctcctcctcctcctcctcc
tccccctcttcgtctcctccatctttgcCACCCCCTTCTCTGGGACAATA
GCCGCCTCTTTGGCATGGGCCacatctttcctcctcgaccacaACGTCCC
CGACGCCGCCCTCTCTGCCGAATACCTACTGCTTCACGCCCTCCACTACC
CGCCATCAACGCCGCGGCGGGTCCTTCATGAACGGGTCTCCGAGGGAagt
gaagagaaaggggaaaatgtTGTACCCCCAGACACCCGGGCTGCCTTTCA
ATCCTTGTTATACCGACATGGAATTAAGCGGGAGCCAGTGCAGTATTTGG
TGGGAGGTTGGGATTTCCATCGCATCCATTTAGCCCTGGCGCCCCCCGTC
CTGATACCAAGGCCTGAGACCGAAGAGCTCGTGGAGTgggtcctggagga
ggaagggagggaggaaggggaagagggagggggagggggaggaccaaATC
TTCCGATCCGGTTTTTGGACGTGGGTTGTGGGAGCGGGGCGATCGGCTTG
GCTTTACTCTGGGCTTACAGGGACGCGTGGCCGTcaagAGACGTCACTTG
CGTGGCCCTAGATCCGCATCCTGCTGCAGTCGCTCTTGCAAAGGCGAATG
CTGCTCGACTGggtttccctccatccgcttACCAGGTCGTGCAGGGCGCG
Ctaggggaggacaagggggagggaggggaggagggagagaaggagggagg
ggtggtggcaAGCCTCTTGGGGGCCGGAGGCTTGAAAGGAGGCAGTATag
agggggaatgggaaaCGAAGAGGCGCAAAAAATTCGACTTCATTGTCGCG
AACCCTCCGTACATCCCCGACGCGGATATGGGCCGGCTTCAGCCTGAAGT
CAAGGACTGGGAGGACCCAGGTGCTTtggcaggcggaggcgacgACGGAA
CTCGAATAATCAGGGCGATACTGCGAGCTGCCCCGCGATTGCTTGAACCG
AATCGCATAGGGATGAAAAAAGCGAAGGTATGGATGGAAGTAGATGCGAG
ccacccccttcttttcgcgaaggaggaagaagaaaaggagaggaggaaag
tgggagGAGAATTGCGGCTGATGGAATGGCGGAAAGACCTCTCTGGTAAG
CCGCGTTTCTGTTGCTGGGCACTGAATGAATCTCCGAAAGATGCGGATTC
ATGAATGCACCAGACAGCCTATGTCCACACCACGTCGTTCCCtgttcttc
ccttcttcgaATCTCCGACAGAAAATGACGGCCATCCCttgtcccttctc
tttctcttctctcatATCTCATTActctccttccgcttcaTCCACCTATG
ctccgtctttctcctcttcctccctttgctcctcctcctcctcctcctcc
tcctcctcctcctcctcctcctcctcctccccctcttcgtctcctccatc
tttgcCACCCCCTTCTCTGGGACAATAGCCGCCTCTTTGGCATGGGCCac
atctttcctcctcgaccacaACGTCCCCGACGCCGCCCTCTCTGCCGAAT
ACCTACTGCTTCACGCCCTCCACTACCCGCCATCAACGCCGCGGCGGGTC
CTTCATGAACGGGTCTCCGAGGGAagtgaagagaaaggggaaaatgtTGT
ACCCCCAGACACCCGGGCTGCCTTTCAATCCTTGTTATACCGACATGGAA
TTAAGCGGGAGCCAGTGCAGTATTTGGTGGGAGGTTGGGATTTCCATCGC
ATCCATTTAGCCCTGGCGCCCCCCGTCCTGATACCAAGGCCTGAGACCGA
AGAGCTCGTGGAGTgggtcctggaggaggaagggagggaggaaggggaag
agggagggggagggggaggaccaaATCTTCCGATCCGGTTTTTGGACGTG
GGTTGTGGGAGCGGGGCGATCGGCTTGGCTTTACTCTGGGCTTACAGGGA
CGCGTGGCCGTcaagAGACGTCACTTGCGTGGCCCTAGATCCGCATCCTG
CTGCAGTCGCTCTTGCAAAGGCGAATGCTGCTCGACTGggtttccctcca
tccgcttACCAGGTCGTGCAGGGCGCGCtaggggaggacaagggggaggg
aggggaggagggagagaaggagggaggggtggtggcaAGCCTCTTGGGGG
CCGGAGGCTTGAAAGGAGGCAGTATagagggggaatgggaaaCGAAGAGG
CGCAAAAAATTCGACTTCATTGTCGCGAACCCTCCGTACATCCCCGACGC
GGATATGGGCCGGCTTCAGCCTGAAGTCAAGGACTGGGAGGACCCAGGTG
CTTtggcaggcggaggcgacgACGGAACTCGAATAATCAGGGCGATACTG
CGAGCTGCCCCGCGATTGCTTGAACCGAATCGCATAGGGATGAAAAAAGC
GAAGGTATGGATGGAAGTAGATGCGAGccacccccttcttttcgcgaagg
aggaagaagaaaaggagaggaggaaagtgggagGAGAATTGCGGCTGATG
GAATGGCGGAAAGACCTCTCTGGTAAGCCGCGTTTCTGTTGCTGGGCACT
GAATGAATCTCCGAAAGATGCGGATTCATGAATGCACCAGACAGCCTATG
TCCACACCACGTCGTTCCCtgttcttcccttcttcgaATCTCCGACAGAA
AATGACGGCCATCCCttgtcccttctctttctcttctctcatATCTCATT
ActctccttccgcttcaTCCACCTATGctccgtctttctcctcttcctcc
ctttgctcctcctcctcctcctcctcctcctcctcctcctcctcctcctc
ctcctccccctcttcgtctcctccatctttgcCACCCCCTTCTCTGGGAC
AATAGCCGCCTCTTTGGCATGGGCCacatctttcctcctcgaccacaACG
TCCCCGACGCCGCCCTCTCTGCCGAATACCTACTGCTTCACGCCCTCCAC
TACCCGCCATCAACGCCGCGGCGGGTCCTTCATGAACGGGTCTCCGAGGG
AagtgaagagaaaggggaaaatgtTGTACCCCCAGACACCCGGGCTGCCT
TTCAATCCTTGTTATACCGACATGGAATTAAGCGGGAGCCAGTGCAGTAT
TTGGTGGGAGGTTGGGATTTCCATCGCATCCATTTAGCCCTGGCGCCCCC
CGTCCTGATACCAAGGCCTGAGACCGAAGAGCTCGTGGAGTgggtcctgg
aggaggaagggagggaggaaggggaagagggagggggagggggaggacca
aATCTTCCGATCCGGTTTTTGGACGTGGGTTGTGGGAGCGGGGCGATCGG
CTTGGCTTTACTCTGGGCTTACAGGGACGCGTGGCCGTcaagAGACGTCA
CTTGCGTGGCCCTAGATCCGCATCCTGCTGCAGTCGCTCTTGCAAAGGCG
AATGCTGCTCGACTGggtttccctccatccgcttACCAGGTCGTGCAGGG
CGCGCtaggggaggacaagggggagggaggggaggagggagagaaggagg
gaggggtggtggcaAGCCTCTTGGGGGCCGGAGGCTTGAAAGGAGGCAGT
ATagagggggaatgggaaaCGAAGAGGCGCAAAAAATTCGACTTCATTGT
CGCGAACCCTCCGTACATCCCCGACGCGGATATGGGCCGGCTTCAGCCTG
AAGTCAAGGACTGGGAGGACCCAGGTGCTTtggcaggcggaggcgacgAC
GGAACTCGAATAATCAGGGCGATACTGCGAGCTGCCCCGCGATTGCTTGA
ACCGAATCGCATAGGGATGAAAAAAGCGAAGGTATGGATGGAAGTAGATG
CGAGccacccccttcttttcgcgaaggaggaagaagaaaaggagaggagg
aaagtgggagGAGAATTGCGGCTGATGGAATGGCGGAAAGACCTCTCTGG
TAAGCCGCGTTTCTGTTGCTGGGCACTGAATGAATCTCCGAAAGATGCGG
ATTCATGA back to top
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