rna6559, rna6559 (mRNA) Nannochloropsis gaditana

Overview
Namerna6559
Unique Namerna6559
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1049
Alignment locationCM002468.1:796325..797182 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102424g1.3789.mrna
Orig protein idgnl|cribi|Naga_102424g1.3789
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:796325..797182 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102424g1gene6337Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24130.1cds6543Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6559rna6559-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6559 ID=rna6559|Name=rna6559|organism=Nannochloropsis gaditana|type=mRNA|length=1049bp
CTCGAATCCGATCGCGCGTACACATCTCATAAGAAAGGCATAATTTGGGT
GTGAATAGCCATGACTGTAAAAGAGGACCGAGACATCTTCGAACAGAAGC
TCCAGGTAGAGGCGAAGGCAAGTAAAGAACAGATTCCGGACAAAGAAGCA
GCCTGGGAAGCCGAGCGCAAGAAAGCGAAGCCTGATTTGAACGTCAAATT
CATCTATGCCTACGTCTTGACCATGTCCAACTCGGAACGGCACAAATCCA
TGGGCATGCGGTTGCTGAACGAGCTGATTGCGGCCCGTTTCAACGTGGAG
GAATGCCTGTATGCGTTGGCGGTGTGTTTGTACAGCCAAACGGAATGGCG
GGAGTGTAGGGAGGTAGTGGACCGTCTCCTGCGCCTCAACCCCGACCATC
GTTACGGCAACGAACTCCACCTCTTTGTCAAGGACGCGCAAGCCAAGCAA
GATTTGGCGATAGGCGTGGGGGTCGGGGTGGGGGTCATCGGTGCCACTGC
CGCGATTCTACTTGGGGCGATGCTGGGAAGCGGACGTCGTGGACGGTGAG
GTGTTGGTATAGCATTCAGGTGGTGGGATGGGATGGGGGCGGGGAAAGGA
GAAAAATGGATGACAGGTGCGCGATTGGGTGGAAGGGAGAAGGAAGGGAA
GGGGGGGAAGGGAGGGGGCTAGAGTCAGATACAGAGGGTGGACGAATGCG
GGCGTGTATAGCAGGAGGGAGGTGCAAATTCAAGGGAAACCGCCAAGAAG
GACAAAAATGCGATTTGAAAAAGCTTTCGACGGAGTGATGTTCCAAGAAT
TATCCGAAGGGCGATGGCAAAAGGGTAGTGGGCCGTCAGGCAGGGCACGT
CCTAGTATGCCTATGTGCTTTCACCCACCAGACTCCCAGCCTTCCCCCTT
CTTGTCACGCATTGCAAACCTCCCCTTGTAGCCTGTGCCTCCCCCCCCCC
TTTTTCGAGATGATTGTGCAAAAAGCTTCCTCACCACGTGCCTGGCCCCA
TGGTCCCTCCCTTCCGGTTTTCTCCCCCGTATTTTTCCTGCAATTCTCT
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protein sequence of rna6559

>rna6559-protein ID=rna6559-protein|Name=rna6559|organism=Nannochloropsis gaditana|type=polypeptide|length=285bp
MEWEEPDDLNLPPVPLDEKWRDEEEDEEEDEEEEELRRFLQSEESDGLLI
TLESEKRQEKAGTGGKKMSSKKDTRRTRKELWRDFHIHTAHLALLTQRTR
LLSTHASHPSLLAASTAALPPALRRGLSQGPTLLGLQRLSRWFQDTFTQL
SDAHLREEEGKEGASPPELLSALEAKEGSGAVLVQILLAMLRGVGAKARL
VCPLSPRSYQHPPYLLRRRREKGRAVDLTEEGGKGGTKAEGKGEKRKIRR
LLASKEGARPLPGCGVWVEVFVRKGGREGGRTGGE
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mRNA from alignment at CM002468.1:796325..797182-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6559 ID=rna6559|Name=rna6559|organism=Nannochloropsis gaditana|type=mRNA|length=858bp|location=Sequence derived from alignment at CM002468.1:796325..797182- (Nannochloropsis gaditana)
GATGGAATGGGAGGAACCCGACGATTTAAACCTTCCACCGGTGCCTCTAG
ATGAAAAATGGAGGGACGAGGAGGAGGACGAGGAGGAGGACGAGGAGGAA
GAGGAGCTACGTCGTTTTCTGCAGAGCGAGGAGAGTGACGGCTTGCTCAT
CACTTTGGAGTCAGAGAAAAGGCAGGAGAAGGCAGGCACCGGAGGGAAGA
AAATGTCGTCCAAAAAGGACACCCGACGCACCCGCAAAGAATTGTGGCGG
GATTTTCACATCCATACGGCTCATCTTGCCCTCTTGACGCAACGGACCCG
GCTTCTGTCCACCCATGCCTCCCACCCTTCCCTCCTCGCAGCCTCGACGG
CCGCCCTCCCTCCCGCCCTCCGCCGTGGCCTTAGTCAGGGCCCCACCCTC
TTAGGCCTTCAGCGACTTTCCCGTTGGTTTCAAGACACCTTCACCCAGCT
CTCCGATGCCCACTTGAGGGAGGAGGAAGGCAAGGAAGGTGCGTCTCCTC
CGGAGCTGTTGTCGGCCCTGGAAGCAAAGGAAGGAAGTGGGGCCGTGCTG
GTTCAGATTTTACTGGCTATGCTGCGGGGAGTGGGGGCGAAAGCCCGCTT
GGTCTGCCCCTTGTCGCCCAGGAGCTACCAGCACCCTCCCTATCTGCTCC
GCCGGCGACGGGAGAAAGGGAGAGCCGTGGATTTGACAGAGGAGGGAGGG
AAGGGAGGGACCAAAGCGGAGGGGAAGGGGGAGAAGAGGAAGATAAGAAG
GTTGCTGGCATCCAAGGAAGGAGCGAGGCCGTTGCCAGGGTGTGGCGTGT
GGGTGGAGGTGTTTGTGAGGAAAGGAGGGAGGGAGGGAGGGCGGACAGGA
GGGGAGGA
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Coding sequence (CDS) from alignment at CM002468.1:796325..797182-

>rna6559 ID=rna6559|Name=rna6559|organism=Nannochloropsis gaditana|type=CDS|length=857bp|location=Sequence derived from alignment at CM002468.1:796325..797182- (Nannochloropsis gaditana)
ATGGAATGGGAGGAACCCGACGATTTAAACCTTCCACCGGTGCCTCTAGA
TGAAAAATGGAGGGACGAGGAGGAGGACGAGGAGGAGGACGAGGAGGAAG
AGGAGCTACGTCGTTTTCTGCAGAGCGAGGAGAGTGACGGCTTGCTCATC
ACTTTGGAGTCAGAGAAAAGGCAGGAGAAGGCAGGCACCGGAGGGAAGAA
AATGTCGTCCAAAAAGGACACCCGACGCACCCGCAAAGAATTGTGGCGGG
ATTTTCACATCCATACGGCTCATCTTGCCCTCTTGACGCAACGGACCCGG
CTTCTGTCCACCCATGCCTCCCACCCTTCCCTCCTCGCAGCCTCGACGGC
CGCCCTCCCTCCCGCCCTCCGCCGTGGCCTTAGTCAGGGCCCCACCCTCT
TAGGCCTTCAGCGACTTTCCCGTTGGTTTCAAGACACCTTCACCCAGCTC
TCCGATGCCCACTTGAGGGAGGAGGAAGGCAAGGAAGGTGCGTCTCCTCC
GGAGCTGTTGTCGGCCCTGGAAGCAAAGGAAGGAAGTGGGGCCGTGCTGG
TTCAGATTTTACTGGCTATGCTGCGGGGAGTGGGGGCGAAAGCCCGCTTG
GTCTGCCCCTTGTCGCCCAGGAGCTACCAGCACCCTCCCTATCTGCTCCG
CCGGCGACGGGAGAAAGGGAGAGCCGTGGATTTGACAGAGGAGGGAGGGA
AGGGAGGGACCAAAGCGGAGGGGAAGGGGGAGAAGAGGAAGATAAGAAGG
TTGCTGGCATCCAAGGAAGGAGCGAGGCCGTTGCCAGGGTGTGGCGTGTG
GGTGGAGGTGTTTGTGAGGAAAGGAGGGAGGGAGGGAGGGCGGACAGGAG
GGGAGGA
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Synonyms
Publications