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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100426g4.9610.mrna |
| Orig protein id | gnl|cribi|Naga_100426g4.9610 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:756061..757269 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6542 ID=rna6542|Name=rna6542|organism=Nannochloropsis gaditana|type=mRNA|length=1155bp
ATGAGCTTCCGATGGGATTCCTTGCGGGCGCACACGGGTTGTTTGAAACT
CTTCGATTTGAACGACCTGGCCGTCCGCGCCAGTCGGCTCCAATTACGGC
ACGAGCAGAGGCAAGAGCAACTACAACATGCCGCGTCCGATCACCCACGT
GCCTATCACTTCAAACGTGTCACTCCCTCCATGCTCACCGCCCGGAGAAA
CGCGGTCCAGGCGGCGACGGCGGCGGCGGCAGCTCCTCCCGGCGCCCCTC
CCCCCCCCGTAGCCCTTCGCCCGTCTGTTGTCACTGAATCTGCAATGGCC
GCCGGGTACGATACTGTAAGCATGGAAGGTTCCAGAAGGGAGCGCGCATG
GTTTCCAGGGCAAGGACGTACCCTGGTGGGGGAGAACGGTCTGGTGGTTT
TCGTACAGGAGGACGCGAAGGTCAGCGTGATGCGAGATCGGAGGCAGAAG
GAGGATTTGCAACAGGCCTTCCCCACAGCCGACCTGACCCTGGTGGATAC
AGTGTGGGCACAAGCGCGTTCCAATTTCGCGGCGGCTTGTACGATCATGA
CCTCGTTGCGAAATAACGGGCATCATACCCGGAAGGAAGGCGAGGGGAAG
GGAGGGGGCGAGGGAGGGGAAAGTGGTGGTCTGCGCACGGAGGACCCGCG
CGTGTGGCCGTCGGTGGAGGAGGTGTGGGGGGAGGGCGGGAAGGAAGGAG
GGGCTGAGAAAGGGTGGGAGCATGTGCACTTATCGACGCGGGGAGAGCAG
TGGGTGCTTTTGGGGGAAGGGGAGGGGGAGGAGGAGGAGGGGGGGGGGGA
GGAGGGGGAGGAGGAATCGATGACGTATCGGTCTGTGTTGATGAGTAACT
TGATGGAAATGGAGGGAGGAGAGGAGTGGCCAGCCGCCCCTCCGCGACGG
ACATTCCCGTCGCTCTCGTCCCTGGGGACCAGGAAGAAAGTGAGGAGGAG
GGAGGAGGACGTGATGGGAGGGGAGGAGGGTGGATTTTTGGAAGAATACG
AGCTGCAGAAAGCGGTCGGTGTGCGGACGCGAAGGAGCATGGGACGGAAG
CGATTGACAGAGACCGGGAAGAGGAGGATGGCGGCGAAACTACAGGCACG
GCGGGCACCTCGAGCAGCAGGAGAAGAAGGGGAGGATGGGGTGGAGGTGT
GGTGA back to topprotein sequence of rna6542 >rna6542-protein ID=rna6542-protein|Name=rna6542|organism=Nannochloropsis gaditana|type=polypeptide|length=402bp
MFNSRLSHSCRKKKGCTAFPSLLRSGALRKTMALPSFLVCQVAFSMLLAS
LAYRPPAPQKSTSCLRSRASYLQHSWGHALLVGGVGVAAPTLLGLPKPSA
ALVDIGLRKQYVDPTELWQVEYPVGWYVSRRDPSPQNEAPAGLMKASATV
LVVADYSTGATASVVKTNLASLVKEGMGWGTLMPQFGGLGTVENFEDILE
GKGLATLLMRDRDGQLKASAMAPPQMNRALDTDMSVNDGFLSRLTACSPV
GGVMEFEVRTPVNRIPGSAGAAIRGGAGGGTGGGTGGGTGGGTGGGTGGG
RNPTRGRPLKEVSDVWSAIEDASPIERRASPSSESVSTTRKPSPPTLIRQ
QADVRLSKAKAYLRADGSILTAWVSANRSSWEDPDASARLDAILASFDVA
PR back to topmRNA from alignment at CM002468.1:756061..757269+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6542 ID=rna6542|Name=rna6542|organism=Nannochloropsis gaditana|type=mRNA|length=1209bp|location=Sequence derived from alignment at CM002468.1:756061..757269+ (Nannochloropsis gaditana)
ATGTTCAATTCACGTCTTTCCCACTcatgcaggaagaagaaaggctgCAC
GGCCTTCCCAAGCTTACTCCGGTCAGGAGCATTGCGAAAGACGATGGCGT
TGCCCTCCTTTTTGGTCTGCCAGGTGGCCTTCAGCATGTTGCTGGCATCC
CTGGCCTAccgtcctcccgcacccCAAAAAAGCACGTCCTGCCTGCGATC
ACGAGCATCATACCTGCAGCATTCCTGGGGGCACGCCCTTCTTGTTGGTG
GGGTGGGTGTAGCCGCCCCTACTCTGTTAGGCCTCCCAAAACCCTCGGCA
GCCTTGGTCGACATCGGTCTACGCAAGCAATATGTGGACCCCACGGAGCT
TTGGCAGGTGGAATACCCCGTGGGATGGTATGTGTCCCGACGGGATCCCT
CGCCTCAGAACGAGGCGCCGGCCGGTCTGATGAAAGCCAGTGCGACCGTA
TTGGTAGTGGCAGACTACTCCACGGGCGCCACTGCCAGCGTCGTCAAGAC
CAACCTTGCATCCTTGGTCAAAGAAGGGATGGGATGGGGCACGCTCATGC
CGCAGTTCGGAGGGTTGGGGACCGTCGAGAATTTCGAGGATAttttggag
ggaaaggggttgGCTACGCTATTGatgagggacagggacgggCAGTTGAA
GGCCTCGGCGATGGCCCCGCCTCAAATGAACCGTGCGTTGGACACGGACA
TGAGCGTGAACGACGGGTTTTTGTCGCGCCTGACGGCGTGCTCGCCGGTA
GGTGGGGTCATGGAGTTCGAAGTGAGGACGCCAGTGAACAGAATACCCGG
CTCGGCGGGGGCAGCGAtaaggggaggggccgggggagggaccgggggag
ggaccgggggagggaccgggggagggaccgggggagggaccgggggaggt
AGGAACCCGACCCGAGGACGTCCTCTGAAGGAGGTGTCGGACGTGTGGAG
TGCGATTGAGGACGCGAGTCCCATCGAGCGGCGGGCCTCGCCGTCCAGTG
AGAGCGTGAGCACGACCCGCAAaccgtccccgcccacgtTGATCAGGCAG
CAGGCGGATGTGAGGCTGAGTAAAGCCAAGGCATATTTAAGGGCGGATGG
AAGTATCTTGACGGCTTGGGTCTCGGCGAATCGAAGCAGCTGGGAGGATC
CGGATGCCTCCGCACGTTTGGATGCGATCTTAGCCTCGTTTGACGTGGCT
CCTCGGTAG back to topCoding sequence (CDS) from alignment at CM002468.1:756061..757269+ >rna6542 ID=rna6542|Name=rna6542|organism=Nannochloropsis gaditana|type=CDS|length=1209bp|location=Sequence derived from alignment at CM002468.1:756061..757269+ (Nannochloropsis gaditana)
ATGTTCAATTCACGTCTTTCCCACTcatgcaggaagaagaaaggctgCAC
GGCCTTCCCAAGCTTACTCCGGTCAGGAGCATTGCGAAAGACGATGGCGT
TGCCCTCCTTTTTGGTCTGCCAGGTGGCCTTCAGCATGTTGCTGGCATCC
CTGGCCTAccgtcctcccgcacccCAAAAAAGCACGTCCTGCCTGCGATC
ACGAGCATCATACCTGCAGCATTCCTGGGGGCACGCCCTTCTTGTTGGTG
GGGTGGGTGTAGCCGCCCCTACTCTGTTAGGCCTCCCAAAACCCTCGGCA
GCCTTGGTCGACATCGGTCTACGCAAGCAATATGTGGACCCCACGGAGCT
TTGGCAGGTGGAATACCCCGTGGGATGGTATGTGTCCCGACGGGATCCCT
CGCCTCAGAACGAGGCGCCGGCCGGTCTGATGAAAGCCAGTGCGACCGTA
TTGGTAGTGGCAGACTACTCCACGGGCGCCACTGCCAGCGTCGTCAAGAC
CAACCTTGCATCCTTGGTCAAAGAAGGGATGGGATGGGGCACGCTCATGC
CGCAGTTCGGAGGGTTGGGGACCGTCGAGAATTTCGAGGATAttttggag
ggaaaggggttgGCTACGCTATTGatgagggacagggacgggCAGTTGAA
GGCCTCGGCGATGGCCCCGCCTCAAATGAACCGTGCGTTGGACACGGACA
TGAGCGTGAACGACGGGTTTTTGTCGCGCCTGACGGCGTGCTCGCCGGTA
GGTGGGGTCATGGAGTTCGAAGTGAGGACGCCAGTGAACAGAATACCCGG
CTCGGCGGGGGCAGCGAtaaggggaggggccgggggagggaccgggggag
ggaccgggggagggaccgggggagggaccgggggagggaccgggggaggt
AGGAACCCGACCCGAGGACGTCCTCTGAAGGAGGTGTCGGACGTGTGGAG
TGCGATTGAGGACGCGAGTCCCATCGAGCGGCGGGCCTCGCCGTCCAGTG
AGAGCGTGAGCACGACCCGCAAaccgtccccgcccacgtTGATCAGGCAG
CAGGCGGATGTGAGGCTGAGTAAAGCCAAGGCATATTTAAGGGCGGATGG
AAGTATCTTGACGGCTTGGGTCTCGGCGAATCGAAGCAGCTGGGAGGATC
CGGATGCCTCCGCACGTTTGGATGCGATCTTAGCCTCGTTTGACGTGGCT
CCTCGGTAG back to top
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