rna6537, rna6537 (mRNA) Nannochloropsis gaditana

Overview
Namerna6537
Unique Namerna6537
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length486
Alignment locationCM002468.1:747019..747390 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_103947g1.3218.mrna
Orig protein idgnl|cribi|Naga_103947g1.3218
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:747019..747390 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_103947g1gene6315Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24152.1cds6521Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6537rna6537-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6537 ID=rna6537|Name=rna6537|organism=Nannochloropsis gaditana|type=mRNA|length=486bp
ATGAAATGCGGAGGGTGCCGCAAAATGCGATTTCCATGCTCAGAGTCATA
CGAAAAAGTAACTCAATCTGAGGTACGTGGGACCGATTTAAGTAGATGTG
CGTATAGAAAGCATCGGTGCGATGCATGCCGCACGGAGACATCAGCAATT
TTGGAAGAGGAGCGAGAATGGGGAAAAAGTAACGAAAGAAGGCTGGAAGG
TTGGTGTGTGGCATGTCTGTGGGTGCCCGAGTCGGCACATGTTTTTGTCA
GACACACACAAGGGAATGCTTTCGGGGTCCGCCCTCGGTCGCCTGCCCCG
ATGCCGCTGTCGTGTGCTTGCGGATGGGAACCCTCTCTTTGCGGTGCGAG
GAGTTCTGAAAAGACATTCGGGCGACACGGATTGAAAGCGAAGATGGAGC
CCGTTTTTGTTGTTCCCAGGTTGAGTGAGTGCTTGGAACTAAGACGTCGT
TGTCCGTCGGAGAGGGAGCCGATCATTCTCAGATAG
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protein sequence of rna6537

>rna6537-protein ID=rna6537-protein|Name=rna6537|organism=Nannochloropsis gaditana|type=polypeptide|length=111bp
LTSFLDDTEEEEEEEEEERRPSAPSPPPSCRPSLPHPDTHTAPDDGIAAI
QEGKEGGRREGGKEGGREGGKNGKDVTAPVQPAYLDLETFASAEALEVKE
GGGRDKRELCP
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mRNA from alignment at CM002468.1:747019..747390-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6537 ID=rna6537|Name=rna6537|organism=Nannochloropsis gaditana|type=mRNA|length=372bp|location=Sequence derived from alignment at CM002468.1:747019..747390- (Nannochloropsis gaditana)
CTGACATCTTTTTTGGACGACACGGAGGAAGAGGAAGAGGAAGAGGAGGA
GGAGCGCAGACCTTCTGCCCCCTCCCCCCCTCCCTCCTGCCGTCCCTCCC
TCCCTCACCCCGACACCCACACAGCCCCTGACGATGGAATCGCAGCCATC
CAGGAGGGAAAAGAAGGGGGGAGGAGGGAGGGAGGGAAGGAGGGAGGGAG
GGAGGGAGGGAAGAACGGCAAGGATGTCACTGCTCCTGTGCAACCGGCGT
ACCTTGACCTGGAGACTTTCGCTTCTGCCGAGGCTCTGGAGGTAAAGGAG
GGTGGAGGGAGGGACAAGAGGGAGCTTTGTCCATGAAGCAGCAATCAAGC
TGCCATGGCGAGCGTGTTTTCG
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Coding sequence (CDS) from alignment at CM002468.1:747019..747390-

>rna6537 ID=rna6537|Name=rna6537|organism=Nannochloropsis gaditana|type=CDS|length=336bp|location=Sequence derived from alignment at CM002468.1:747019..747390- (Nannochloropsis gaditana)
CTGACATCTTTTTTGGACGACACGGAGGAAGAGGAAGAGGAAGAGGAGGA
GGAGCGCAGACCTTCTGCCCCCTCCCCCCCTCCCTCCTGCCGTCCCTCCC
TCCCTCACCCCGACACCCACACAGCCCCTGACGATGGAATCGCAGCCATC
CAGGAGGGAAAAGAAGGGGGGAGGAGGGAGGGAGGGAAGGAGGGAGGGAG
GGAGGGAGGGAAGAACGGCAAGGATGTCACTGCTCCTGTGCAACCGGCGT
ACCTTGACCTGGAGACTTTCGCTTCTGCCGAGGCTCTGGAGGTAAAGGAG
GGTGGAGGGAGGGACAAGAGGGAGCTTTGTCCATGA
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Synonyms
Publications