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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100407g5.7967.mrna |
| Orig protein id | gnl|cribi|Naga_100407g5.7967 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:745966..746531 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6536 ID=rna6536|Name=rna6536|organism=Nannochloropsis gaditana|type=mRNA|length=669bp
ATGGCAGCGAGGCAGATATTACGGAGTAACAATAGATTTTTGACAGGATT
GTCAAAGGCGAAAAGCGCGAGGCGGCAAGATGCTGGATCGGGAAATGTTG
AAACGGAGGCTATATGCCTGCTGCCAGACGCAGGGTTGAAGGCAGGAATT
GGTAAGTTTTCGAACGTTTTCAGGAACAGCATGCTTGGACGAGGATGTGT
CCTCTCATCTATGACGATTCAGAGCGGTCAGAACGTCCTTCCTTGCGTTC
TTTGTAGCCCGTTTCGGAATGGGATGCCTACAGCCGGAGCAGTTCGAAGC
GTCTGTCAGAGTGGAGGTGGAAGCGGCAGGGAGGGCGTGGATGTGCACGT
GGCATTTTTGAAAGCTTTCCCGACCGCATGGACCGAGCGGGACGGAGGCT
GTAGGTGGTTGGGAGCGGGCAGGGGTCACACAATAATTAAGGGTTCTGCT
GCCTACCTCAAGACGTTTCGAGTGTGGCTGGAGGATCTGGCCGTAGAAGA
GGGACTTCCGGGCAGAATGGAGGGGTACTCTCTCTGCATGGAGAGGGGTT
GGGGATTACTGGGTGTGTACATCAGTACATTTGAGAGACTTAGTAGCTGC
TTGAAAATTAGTAAGAATGAAAAGGGAGGACTGGGAAATGAATCTACGAG
CGATTTGAGTGATCAATGA back to topprotein sequence of rna6536 >rna6536-protein ID=rna6536-protein|Name=rna6536|organism=Nannochloropsis gaditana|type=polypeptide|length=161bp
MKCGGCRKMRFPCSESYEKVTQSEVRGTDLSRCAYRKHRCDACRTETSAI
LEEEREWGKSNERRLEGWCVACLWVPESAHVFVRHTQGNAFGVRPRSPAP
MPLSCACGWEPSLCGARSSEKTFGRHGLKAKMEPVFVVPRLSECLELRRR
CPSEREPIILR back to topmRNA from alignment at CM002468.1:745966..746531+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6536 ID=rna6536|Name=rna6536|organism=Nannochloropsis gaditana|type=mRNA|length=566bp|location=Sequence derived from alignment at CM002468.1:745966..746531+ (Nannochloropsis gaditana)
ATGAAATGCGGAGGGTGCCGCAAAATGCGATTTCCATGCTCAGAGTCATA
CGAAAAAGTAACTCAATCTGAGGTACGTGGGACCGATTTAAGTAGATGTG
CGTATAGAAAGCATCGGTGCGATGCATGCCGCACGGAGACATCAGCAatt
ttggaagaggagcgagaaTGGGGAAAAAGTAACGAAAGAAGGCTGGAAGG
TTGGTGTGTGGCATGTCTGTGGGTGCCCGAGTCGGCACATGTTTTTGTCA
GACACACACAAGGGAATGCTTTCGGGGGTAAGACGGAGGGCAGAGGAtaa
ggtagggagggaatcgAGGAAACCGTacgggagagggcgtgaCACGTTCT
TCTTCAGTCCGCCCTCGGTCGCCTGCCCCGATGCCGCTGTCGTGTGCTTG
CGGATGGGAACCCTCTCTTTGCGGTGCGAGGAGTTCTGAAAAGACATTCG
GGCGACACGGATTGAAAGCGAAGATGGAGCCCGTTTTTGTTGTTCCCAGG
TTGAGTGAGTGCTTGGAACTAAGACGTCGTTGTCCGTCGGAGAGGGAGCC
GATCATTCTCAGATAG back to topCoding sequence (CDS) from alignment at CM002468.1:745966..746531+ >rna6536 ID=rna6536|Name=rna6536|organism=Nannochloropsis gaditana|type=CDS|length=972bp|location=Sequence derived from alignment at CM002468.1:745966..746531+ (Nannochloropsis gaditana)
ATGAAATGCGGAGGGTGCCGCAAAATGCGATTTCCATGCTCAGAGTCATA
CGAAAAAGTAACTCAATCTGAGGTACGTGGGACCGATTTAAGTAGATGTG
CGTATAGAAAGCATCGGTGCGATGCATGCCGCACGGAGACATCAGCAatt
ttggaagaggagcgagaaTGGGGAAAAAGTAACGAAAGAAGGCTGGAAGG
TTGGTGTGTGGCATGTCTGTGGGTGCCCGAGTCGGCACATGTTTTTGTCA
GACACACACAAGGGAATGCTTTCGGGGTCCGCCCTCGGTCGCCTGCCCCG
ATGCCGCTGTCGTGTGCTTGCGGATGGGAACCCTCTCTTTGCGGTGCGAG
GAGTTCTGAAAAGACATTCGGGCGACACGGATTGAAAGCGAAGATGGAGC
CCGTTTTTGTTGTTCCCAGGTTGAGTGAGTGCTTGGAACTAAGACGTCGT
TGTCCGTCGGAGAGGGAGCCGATCATTCTCAGATAGATGAAATGCGGAGG
GTGCCGCAAAATGCGATTTCCATGCTCAGAGTCATACGAAAAAGTAACTC
AATCTGAGGTACGTGGGACCGATTTAAGTAGATGTGCGTATAGAAAGCAT
CGGTGCGATGCATGCCGCACGGAGACATCAGCAattttggaagaggagcg
agaaTGGGGAAAAAGTAACGAAAGAAGGCTGGAAGGTTGGTGTGTGGCAT
GTCTGTGGGTGCCCGAGTCGGCACATGTTTTTGTCAGACACACACAAGGG
AATGCTTTCGGGGTCCGCCCTCGGTCGCCTGCCCCGATGCCGCTGTCGTG
TGCTTGCGGATGGGAACCCTCTCTTTGCGGTGCGAGGAGTTCTGAAAAGA
CATTCGGGCGACACGGATTGAAAGCGAAGATGGAGCCCGTTTTTGTTGTT
CCCAGGTTGAGTGAGTGCTTGGAACTAAGACGTCGTTGTCCGTCGGAGAG
GGAGCCGATCATTCTCAGATAG back to top
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