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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100407g4.7969.mrna |
| Orig protein id | gnl|cribi|Naga_100407g4.7969 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:745094..745879 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6535 ID=rna6535|Name=rna6535|organism=Nannochloropsis gaditana|type=mRNA|length=4089bp
ATGAAGGGCGGAGGTCCGGGGCGGGGATGGGCTGGTAGTCAGGGAGGATG
GGTAGGAGGAAGGGGCGGCCAGCGAGTGGAAGGGGAGCACAGCGACAGCC
TTGGCCATGGCACCCTAGGTGTCGGGGGAGGGCCTGAAGGATTGCCTGTT
ACCGGTAGGCTGCAGCAGCAGCCGCACGAGTCGCCACCGTCTTACCCACA
GACTGCACTCCACAAGGCGCGTGCCCTCGGGCGGCAGCCATATTCACCGC
CTATGGAGACCCCAGACGCCCTGTGGCCTTCGATTCCATCCAGCAGCGAT
TTCCGTTCGGGCACCGGCCCTGGCATTCACACCCTGGGAGGGGAATCGCC
CGGCCCTAGTCTCGTGTGGCCGTCGGGAGGATCGGAACGGCCGCGCTCCC
GACTGGAGGAAGGGCCAGGACACGACGAAGCGAGCAGGGCCTCCCCCTAT
GGAGGCTACGGAGCAGGCGAATTGGGGACGCCGGGTCGGGGCGTGGGTAA
TGGCTTGGGCAGCCTGGGCCCCAACACCAGCGACGGCTCAACCGTCCTGC
CCGAGTCTCGTCAGGCCCCGCAGCACATCCATTTAAATGGGGGCCATAGC
GGGGGAAATAATGGGTTCCTGCCGCCTGCCTTGCGCCATTTCTCCATGCC
CCAAGAAGGAGTGCCCCCCCATGTCCACGCCACGCCCACGCTCGGGCCGT
CGGCCCGCCCTGTTGACGCTCGGCATGTCTCCTCTTCCTCCTCCGGTGCT
TCCCCTTTCCTACCCGCCTCCCACGTCCAGCCGGTGGTAGAGTGGATCGC
GCAATTTATTCAACAGAAAGGCGGGATGATCACGGCGGCGAATTTGGGTT
CGGCACTGGCCCGCCTGCACCCGAATTTCTACGCACTGTTGAAAGCCTCG
CATGGGGGACTGACGACCTTTTTGTCGGAGTACTCGCATCGTTTCAGGTT
TGCGAATGACCCGCCTTTCAACCACATCTTTTTGCAAGAAGAGGGAGGGG
AGGAGGGGGGTCGGACGGCCGCGCAGATGCCCCGTATGCCCTCGGCGCCT
GCCTCGAGCCCCTGGACCCTCCAAGGATCGATGGCCTCCTCGTTTTCGAC
GGGTCCCAAGAGAGGATCTGGAGGGGACCTGGGAGGGGAGGTGGCCCCCG
GAGGACGATACGGGGGGGAGGCGCCTGCCTCCGTCCATCCCTATCCGCTA
CAGTCGCTGCAACCGCCAGCATCGGCACGGTCGTCCCATCCATCTCAGGG
CGTCGGAGTCGGAGGGAAGGATGGAGCGCTCAGTGATGAGACGCTCTGGC
GCTCTTTCATGTCCTCCCCCGGGCTCTCCGCCGCTTCCTCGTCCCCTGCT
CTGCCCCCCCGACCAGGGCAAGGGGTAATGCAGCGCTCTCTTTCCGGGGG
TGCCATGCCCGTCTTCCTCTCGCCCAACCACCCGTCCTTCCTCCCCCAGC
CCCTCACCCTGCACGAGCAACCACAGCAAGCTCACCACTCGGCGGGCATG
CTGGGTGGGATCGCGGGTTTGGGTCCGGGGAAAGTAGTTTCCTCCCCCTC
CCTCCACCTCCTCCACCAGCAGCAGCCACCACCCTCTGGACTGACCTACC
TTGCCTCGACACAGCAGCAGCACCACCAGTCTGCCGCGCTCCCGCCGCCG
GCGGGCGAGCCACGTTTCTCGGGCGCCACATTGCTCCCTGCCCATGGAAG
CCAGGCTCGTGCCATGTCCAAGCTGGGGAGGGAGGGAGGGTGTCCCCCGG
ACCAAGTCTTGGAAACCGACGTGGTACGGGCCACTGGCGAAATCCTTCGG
AACGCGGCCAATTATGCCTTGAAAGCGGTGGAGCTGGCGAATACTTTGCG
AGCCCGTTTGGGAACGAAAGTGCTGGCGAAGGTCCGGGAACGGTATGGAG
GCTTGCTGTTCCTCTTGGAACGGCACCCTTCTTTTTTCCGTGTCGACCGG
ATTCCTAAAAATGACTGCGTGACCTTACTCCAAGGTGGGTTGATGATGGC
GTCGGCGGCCGCGCCGCAGCAGCAGCACCAGGTGCTGGAAGGGGCCATGC
CAGCCAGACCCTTGGGGGGGGGCACGCCCCTGATGGGGGGAAGAGCAATG
GGGGGGAATGACGGGGCACGGGGGGGAACCATGTCGGCATCCGCCTATAC
CCAAACGATCCAGCAGCTCCAGCAGCAGGTGGCTCTGGCCAGGGAGAAGG
AGGCGTTTGCAGCAGCGAAGATGCGTGCGCTCTCTCAACAACAACACCAA
CAACAACATCATCAACAACAACAGCAACAGCGGCAACAACAACCACCTCA
TCAACAACTACAGCAGCAACAGCATCAACAACCACCTCATCAGCAACAAC
AACAACAACAACAGCAACAACAACCACCTCATCATCATCAACAACAACAA
CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACA
ACAACAACAACCACCTCATCATCATCATCAACAGCAACAACAACAACCAC
CACCACCACAACAGCAACAACACCAACAACAACACGAGCAACAGCAGCAA
CCACTAGACCAACAACAATATCATCGGCAACATAATCAGCAACATATTCA
GCAGCAACAACAACAACAACATCAACAACAATCACAACCACAATCCTTTC
AACAGCATCAGCAGCAATATCAACAGCAACAGCACCAGCAACAGTGGCAG
CAACATGCTCAGCAATTGCCATCGAATAGTCTCTCCTCCCCCTTCCTGCC
ATCTTCCATGGAGAATATTCAATTGATGCCAGAGGACCGGCAAGTCCATG
AAGGGAGGGAGGGAGGGGCCGAGGGAGGGAGGGGTCCGACCGGGGATGCC
TCCCTGCAACGGCGACACTCATGGAACAGTCTGATGGGCATGCGACAGGA
CGAAAATGGCGACGGGAGAGGGGCTTTGGTAGTCGACGGGGTCGGTGGAG
GGCCGCCAACAGGGCGTCCTTGCCTGGGGCCCGCCTCTGCCTCGTCCGCG
TCTCCGCCCTTGTTGCCTCCCTCCCTGCCCCTGGCGACCGCCTGTGGGGC
TGGAAATGGGGAGGGAGGGAGGGAGGGTGGAACGGTCGGCAGGAACGTGT
TCCTGCCTTCTGCGGCGCACGGGGCGGTGACACTCGCCCCATTCCCAGCG
GAACCGGGCGTTGGGGACAAGCAAAGCGGGGCTAGCCCGGGTGATGGGAT
TGTGGTGGCACAGCATGCCTGGCGTCCGCAAGAAGTGTTCTTACGGGAAG
GTGACGGCACGGCACTCCAAGGAGAAAAGTCCGGTGGGGTGGAGGAAAGC
GTCGGTAACGGCTCTGGAGCCGTTTCACCCTCTTCTTCGGTTGGGGCGAC
CGCCAGTCGCGGTCCTTCGAGGAACAATAGTGACGTGAATATTTGGGCCA
TGAACAATGCGAGTTGTGGTGCGTTAGGCTCCGGGGGAGGGCGGGGCGAG
GAAGGGAAAGAGGACGGGGCGATGCGAACGCTGGCTGCGCACCCGTCGGA
TGACTCCTTCCTCCTCTTCGGCCGAGGAACCGGGGGGTTGGACGTAGGGG
GGCAGATCTGGGTGGGTGACGGCACGCGCTCGAAGGAGGAAAAGGCCCAC
ATGCCGTCCGGATGGGGGGGAGGAACAGGGTTGGAGGCCACGGGGCTTGC
ACGCGTGGGACCGACGTCGAGCTTCTCCCCCTCCTCCTCCTCCTCCTTCC
TCCGTGCCCATCCCCTCCAAGCCGCCAGCCACAGCAGCAGCAGCGACAGC
CTGAGCAGCCATTGCAGTGGGAGCGGGGGGGGGGGCGGGAGGACTTTGCG
GGCAGCAACCCTCCTTGGGCCTTACCCTCTCCCCCGCAGCCTCCCCCATC
GCCTCCCCTCCGACGGCGCTCTCCGCATTAGGCGCGACGGGCACGGCGGG
GCTATCCCATGGAGGGGGAGGAAGGTGCGCGGTCCTGCAAATCTTGACCA
ACAACCATTTTGTCCCCACCCAAGCCTGGCCGTTGGAACCGTTGCGGGAT
GCCGGCTACGTGACCGTGGTGGCGGAAGAACTCCGGGCCGTGGGTGGCAC
CACCACCGTCAGCAAACTCCGGGGCCTTTTGAAACATAA back to topprotein sequence of rna6535 >rna6535-protein ID=rna6535-protein|Name=rna6535|organism=Nannochloropsis gaditana|type=polypeptide|length=222bp
MAARQILRSNNRFLTGLSKAKSARRQDAGSGNVETEAICLLPDAGLKAGI
GKFSNVFRNSMLGRGCVLSSMTIQSGQNVLPCVLCSPFRNGMPTAGAVRS
VCQSGGGSGREGVDVHVAFLKAFPTAWTERDGGCRWLGAGRGHTIIKGSA
AYLKTFRVWLEDLAVEEGLPGRMEGYSLCMERGWGLLGVYISTFERLSSC
LKISKNEKGGLGNESTSDLSDQ back to topmRNA from alignment at CM002468.1:745094..745879+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6535 ID=rna6535|Name=rna6535|organism=Nannochloropsis gaditana|type=mRNA|length=786bp|location=Sequence derived from alignment at CM002468.1:745094..745879+ (Nannochloropsis gaditana)
ATGGCAGCGAGGCAGATATTACGGAGTAACAATAGATTTTTGACAGGATT
GTCAAAGGCGAAAAGCGCGAGGCGGCAAGATGCTGGATCGGGAAATGTTG
AAACGGAGGCTATATGCCTGCTGCCAGACGCAGGGTTGAAGGCAGGAATT
GGTAAGTTTTCGAACGTTTTCAGGAACAGCATGCTTGGACGAGGATGTGT
CCTCTCATCTATGACGATTCAGAGCGGTCAGAACGTCCTTCCTTGCGTTC
TTTGTAGCCCGTTTCGGAATGGGATGCCTACAGCCGGAGCAGTTCGAAGC
GTCTGTCAgagtggaggtggaagcggcagggagggcgtggatgtGCACGT
GGCATTTTTGAAAGCTTTCCCGACCGCATGGACCGAGCGGGACGGAGGCT
GTAGGTGGTTGGGAGCGGGCAGGGGTCACACAATAATTGTAGTCCTCAAC
GGATAACTATGGTGATAATTGCGACCATATAGAGTGACGGAATTGTAAGA
AGGGTTCTGCTGCCTACCTCAAGACGTTTCGAGTGTGGCTGGAGGATCTG
GCCGTAGAAGAGGGACTTCCGGGCAGAATGGAGGGGTACTCTCTCTGCAT
GGAGAGGGGTTGGGGATTACTGGGTACGGAGCGAGCGTAATAATCCTTTG
AGTTGGGCGACAAAAATAATATCACGCAGGTGTGTACATCAGTACATTTG
AGAGACTTAGTAGCTGCTTGAAAATTAGTAAGAATGAAAAGGGAGGACTG
GGAAATGAATCTACGAGCGATTTGAGTGATCAATGA back to topCoding sequence (CDS) from alignment at CM002468.1:745094..745879+ >rna6535 ID=rna6535|Name=rna6535|organism=Nannochloropsis gaditana|type=CDS|length=2007bp|location=Sequence derived from alignment at CM002468.1:745094..745879+ (Nannochloropsis gaditana)
ATGGCAGCGAGGCAGATATTACGGAGTAACAATAGATTTTTGACAGGATT
GTCAAAGGCGAAAAGCGCGAGGCGGCAAGATGCTGGATCGGGAAATGTTG
AAACGGAGGCTATATGCCTGCTGCCAGACGCAGGGTTGAAGGCAGGAATT
GGTAAGTTTTCGAACGTTTTCAGGAACAGCATGCTTGGACGAGGATGTGT
CCTCTCATCTATGACGATTCAGAGCGGTCAGAACGTCCTTCCTTGCGTTC
TTTGTAGCCCGTTTCGGAATGGGATGCCTACAGCCGGAGCAGTTCGAAGC
GTCTGTCAgagtggaggtggaagcggcagggagggcgtggatgtGCACGT
GGCATTTTTGAAAGCTTTCCCGACCGCATGGACCGAGCGGGACGGAGGCT
GTAGGTGGTTGGGAGCGGGCAGGGGTCACACAATAATTAAGGGTTCTGCT
GCCTACCTCAAGACGTTTCGAGTGTGGCTGGAGGATCTGGCCGTAGAAGA
GGGACTTCCGGGCAGAATGGAGGGGTACTCTCTCTGCATGGAGAGGGGTT
GGGGATTACTGGGTGTGTACATCAGTACATTTGAGAGACTTAGTAGCTGC
TTGAAAATTAGTAAGAATGAAAAGGGAGGACTGGGAAATGAATCTACGAG
CGATTTGAGTGATCAATGAATGGCAGCGAGGCAGATATTACGGAGTAACA
ATAGATTTTTGACAGGATTGTCAAAGGCGAAAAGCGCGAGGCGGCAAGAT
GCTGGATCGGGAAATGTTGAAACGGAGGCTATATGCCTGCTGCCAGACGC
AGGGTTGAAGGCAGGAATTGGTAAGTTTTCGAACGTTTTCAGGAACAGCA
TGCTTGGACGAGGATGTGTCCTCTCATCTATGACGATTCAGAGCGGTCAG
AACGTCCTTCCTTGCGTTCTTTGTAGCCCGTTTCGGAATGGGATGCCTAC
AGCCGGAGCAGTTCGAAGCGTCTGTCAgagtggaggtggaagcggcaggg
agggcgtggatgtGCACGTGGCATTTTTGAAAGCTTTCCCGACCGCATGG
ACCGAGCGGGACGGAGGCTGTAGGTGGTTGGGAGCGGGCAGGGGTCACAC
AATAATTAAGGGTTCTGCTGCCTACCTCAAGACGTTTCGAGTGTGGCTGG
AGGATCTGGCCGTAGAAGAGGGACTTCCGGGCAGAATGGAGGGGTACTCT
CTCTGCATGGAGAGGGGTTGGGGATTACTGGGTGTGTACATCAGTACATT
TGAGAGACTTAGTAGCTGCTTGAAAATTAGTAAGAATGAAAAGGGAGGAC
TGGGAAATGAATCTACGAGCGATTTGAGTGATCAATGAATGGCAGCGAGG
CAGATATTACGGAGTAACAATAGATTTTTGACAGGATTGTCAAAGGCGAA
AAGCGCGAGGCGGCAAGATGCTGGATCGGGAAATGTTGAAACGGAGGCTA
TATGCCTGCTGCCAGACGCAGGGTTGAAGGCAGGAATTGGTAAGTTTTCG
AACGTTTTCAGGAACAGCATGCTTGGACGAGGATGTGTCCTCTCATCTAT
GACGATTCAGAGCGGTCAGAACGTCCTTCCTTGCGTTCTTTGTAGCCCGT
TTCGGAATGGGATGCCTACAGCCGGAGCAGTTCGAAGCGTCTGTCAgagt
ggaggtggaagcggcagggagggcgtggatgtGCACGTGGCATTTTTGAA
AGCTTTCCCGACCGCATGGACCGAGCGGGACGGAGGCTGTAGGTGGTTGG
GAGCGGGCAGGGGTCACACAATAATTAAGGGTTCTGCTGCCTACCTCAAG
ACGTTTCGAGTGTGGCTGGAGGATCTGGCCGTAGAAGAGGGACTTCCGGG
CAGAATGGAGGGGTACTCTCTCTGCATGGAGAGGGGTTGGGGATTACTGG
GTGTGTACATCAGTACATTTGAGAGACTTAGTAGCTGCTTGAAAATTAGT
AAGAATGAAAAGGGAGGACTGGGAAATGAATCTACGAGCGATTTGAGTGA
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