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Properties
| Property Name | Value |
|---|
| Product | calcium calmodulin-dependent protein kinase i |
| Orig transcript id | gnl|cribi|Naga_100390g1.3636.mrna |
| Orig protein id | gnl|cribi|Naga_100390g1.3636 |
| Gene | PK |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:669993..671896 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6506 ID=rna6506|Name=rna6506|organism=Nannochloropsis gaditana|type=mRNA|length=1740bp
ATGGAGGATTTATTTAGAGCCCTTCGGGCGGGGACAAAGTTTAAGAAGAC
GTCTCAACCCGGTGCTTGTGCTGCCGCCAACAAGCATCATGGGACACGTA
CAAGCCTTTCCCTGTCATCACCATCTCTGTCAACCTGCGGTCCACCCACG
AACACAAATACATCGTCTCCGTCCGCAGCATTGGATTTCTTTCGGTCTGC
GGCGTTGCCGGACGAACAAAAGAAAAAAAGACCACGGGGGGGGGGCGGGA
GGATGGGGGAAAAGCACGAGGAGGACGAGATGCGGGCCTTCCGTCGACGG
TTGCGGATCAAAGCCCGGGGTGAGAACGTGCCGGACTGCCTCCCTTCCTT
CTCCCTCCTCCCTTGCCCCGACGCCTCTCTCAAGCGGACGTTGCTGAGGA
ACATCGAGTCCTCCCAGTGGAAAGAGCCCACGCCCATACAGATGCAAGCA
CTGCCCGTCCTGGCCATGGGCCGCGACCTCCTGGCCACCGCTCCTACGGG
GTCGGGGAAAACCGCCGCCTTCGTCCTCCCCACCCTCCTACGTCTCGAAA
AGGCCGAGGCCAAGCTCCTGCGAAACGGCCCACGGGCCCTCCTCCTGGCC
CCCACCCGGGAACTCGCCTCGCAAATTTGTGGGGAAGTGCAGCGGTTGGC
GGCTGGAAGAGCCTTCAAAGTCGCGGTGGTGTCCAAGGCGCTGGCGGCGA
CCAAGGATGAGGCAGGTCAAGGGGTATTCTCCGGGTATGATCTCCTGGTC
GCGACGCCGATGCGTCTGCTCCAGGCCCTGCGGGAGGGAAGGGTGGACTT
GAGGCGGGTCCGGGCTGTCGTTTTGGACGAAGCGGACAAGCTGTTCGAAC
TGGGGCGAGAAGGGAAGAAAAACGCGGCGGGCGAATCCTTGGAACCCGAC
AAAAGTTTCCTCGGGCAGGTGGACGAGATCTTGGCCGCCTGTACATACCC
GGAGGTACAGCGCGCCCTCTTCTCCGCTACGCTCCCCCCGCTGATCCAGG
ACTTGGCGGGCAGTGTGCTGCGAGACCCCGTCTCCGTGTCGGTAGGCCTG
CCTTCCAACCGTTCCAACTACACGCACGCGGCCGCCGTCCCCGAATCCGT
GACGCAAGAATTGGTGTTTGTGGGGCGGGAGGAGGGGAAGCTGTTGGCCC
TCCGACAGCTGTTGAAGCAGGGAGTCCTTCCTCCCATCTTGGTCTTCTTG
GAGAACAAGGAGCGGGCCCGGGAGCTCTACCACGAACTCTGCTACGACCA
CCTCCGCGTGGACGTCATGCATGCGGACAGAAGCACGGAGCAACGGGCAG
CGCTCTTGGAGAAGGTCAGGGCGGGGGCCGTGTGGGTCTTGCTGTGCACG
GACCTGTGCGCACGGGGCCTGGACCTTCGGGCGGTGAACGTGGTGGTCAA
TTACGACCTTCCCCCCTCCTGCGTCACCTATGTCCATCGGGTGGGGCGGA
CGGGGAGGGCGGGGAGGGCGGGGAGGGCCGTGACCTTTTGGACTGAGAGG
GACATGGAGGAGGGAGGATCGCTCCGGGCGATCGCGAACGTGATCAAGCT
GAGTGGGGGACAGGTCCCATCGTGGATGGCGGGGTTGAAGAAAGGGGGGA
AGAAGAAGGGGAGGGAGGGAGGGAGGGAGGGAGGGCGGGGGAGGGGAAGG
ATTTCGACGCGGACGGCGTGGGATGTTGAGAAGGCGAAGAGGAGGAAAGA
AGGGCGGGCGCAAGGAGGGGGGGGTATGAAAAAGAAATGA back to topprotein sequence of rna6506 >rna6506-protein ID=rna6506-protein|Name=rna6506|organism=Nannochloropsis gaditana|type=polypeptide|length=441bp
MLQFCSARPDSARTVSMVRAMGTSTIRSRLATRRGTFNSPLAASSGMRNT
SDPARRTRFFSNESRVLGRRGLYSVQDKKGSILSPGRIRRRAWQLPAAHV
TPASASSSACFLLSETLPPSILATLSPSSSSSSSSSSSSSSSSWATPSFS
SLAVLLLGLGWTGCLLQAPPGECRALRNIHEFYKIVEKPIGAGGFGVVCV
GSHRETGEVVAIKQLPKKAIRELKVMTEVDILRLAGEHRNIIGFRDLFQD
EENWYIVMEMAEGGELFDRLVERGAYSEAQASEIMREIVDAVSYLHQQGI
VHCDLKPENLLLATKASDTSNMRLVDFGSAFRADSGKLVSKKGTGTIAYS
APEVISGRPCGYKADVWALGVLMYILLSGYHPFDPLNDANDDQIGARIVK
EKEKYVSFEQPVWERISPEAKMLVKRLLSSDAQTRPTAQVG back to topmRNA from alignment at CM002468.1:669993..671896+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6506 ID=rna6506|Name=rna6506|organism=Nannochloropsis gaditana|type=mRNA|length=1904bp|location=Sequence derived from alignment at CM002468.1:669993..671896+ (Nannochloropsis gaditana)
cctACGCTCCCAGTACACTCGTTCACAGGCTTACGAAGTGAGGGAAACGA
AATCAAAAATTGAGGCTTTAAATTATTCTGCCACACCAGCATCACCCCAA
GGgcgcctctcccttgcccctctgGGGACCCTCTGAAAGAACCAATTTAG
CTTCTGCTATTGACTTTGGCGTAAAATATACCATACCGACGCGGCTCTTC
AGGCACGCGGACGTTTGACCAGGCCTGGCGGGTGCAATACACTCTTTAGG
CACACGGTTGCCGCCCGTTGCGCAGCGGCAACACAGACGATGTTGCAATT
TTGCTCGGCGCGGCCTGACTCGGCCAGGACAGTTTCCATGGTCCGAGCGA
TGGGGACAAGCACCATACGGTCAAGGCTTGCGACCAGAAGAGGCACCTTT
AACTCACCTCTGGCCGCATCAAGCGGCATGAGGAACACCTCAGACCCTGC
CCGCCGAACCCGATTCTTCAGCAACGAGAGCAGAGTCCTTGGACGCCGAG
GCCTTTACAGTGTCCAAGACAAGAAGGGCAGCATCCTGTCCCCAGGAAGA
ATAAGACGTCGGGCGTGGCAATTACCTGCAGCTCACGTTACCccggccag
cgcctccagctcTGCGTGCTTTCTCTTATCCgaaaccctccctccgtcca
tccTCGccactctctccccctcctcctcctcctcctcctcctcatcctcc
tcatcctcctcctcctcctgggccacgccttccttctccagcctggcggt
cctcctcctggggcTAGGCTGGACGGGGTGCCTGCTGCAAGCTCCCCCCG
GGGAATGCCGGGCCCTCCGGAACATCCACGAGTTCTACAAGATCGTCGAG
AAGCCCATTGGCGCCGGTGGCTTTGGAGTCGTGTGCGTGGGCTCGCAccg
ggagacgggggaggtggtggcgattAAGCAGCTGCCCAAGAAGGCGATCC
GGGAGCTTAAGGTGATGACGGAGGTGGACATCCTCCGGCTGGCGGGTGAG
CACCGGAACATCATCGGCTTCCGAGACCTCTTCCAGGATGAGGAGAACTG
GTACATCGTgatggagatggcggaggggggcgagctTTTCGACCGGCTGG
TGGAACGGGGCGCCTACTCGGAGGCCCAGGCAAGTGAGATCATGCGGGAG
ATCGTCGACGCGGTCTCCTACCTGCACCAGCAGGGCATCGTCCACTGCGA
CTTGAAGCCCGAGAACCTCTTGCTCGCCACCAAGGCCAGCGACACCAGCA
ACATGCGCCTGGTTGACTTTGGCTCCGCTTTTCGGGCGGATTCGGGGAAA
CTCGTGTCCAAAAAAGGCACAGGGACCATCGCCTACTCCGCGCCCGAGGT
CATCTCGGGGCGCCCCTGCGGCTACAAAGCGGACGTGTGGGCCCTTGGTG
TCTTGATgtacatcctcctctccggtacgtcccccttccttccttccttc
ctccctcccttcctccctcttgcctccgGTCCCTTTCCAAGGGCGCGCGG
GTGTCCCGCATAAagcctccccgcctgcgcgAGGCTCACGTATCCAATCC
TGCTTTTTGCATCGCTCCACCCCTAACGCgtggcccttcctccctccctc
cctccctcccctcctccctccctccccccctccctccctccctcttcctc
actcaGGCTACCACCCTTTTGACCCCTTGAACGATGCCAACGACGACCAG
ATCGGGGCGCGCATCgtcaaggagaaagagaagtaCGTCTCGTTCGAGCA
GCCCGTCTGGGAACGGATCTCCCCCGAGGCCAAGATGCTGGTGAAACGCT
TGCTCTCCTCGGACGCGCAGACACGACCCACAGCCCAGGTAGGttgaggg
cgagggggaggaaggggttgagggcgagggggaggaaggggttgagggcg
aggg back to topCoding sequence (CDS) from alignment at CM002468.1:669993..671896+ >rna6506 ID=rna6506|Name=rna6506|organism=Nannochloropsis gaditana|type=CDS|length=2652bp|location=Sequence derived from alignment at CM002468.1:669993..671896+ (Nannochloropsis gaditana)
ATGTTGCAATTTTGCTCGGCGCGGCCTGACTCGGCCAGGACAGTTTCCAT
GGTCCGAGCGATGGGGACAAGCACCATACGGTCAAGGCTTGCGACCAGAA
GAGGCACCTTTAACTCACCTCTGGCCGCATCAAGCGGCATGAGGAACACC
TCAGACCCTGCCCGCCGAACCCGATTCTTCAGCAACGAGAGCAGAGTCCT
TGGACGCCGAGGCCTTTACAGTGTCCAAGACAAGAAGGGCAGCATCCTGT
CCCCAGGAAGAATAAGACGTCGGGCGTGGCAATTACCTGCAGCTCACGTT
ACCccggccagcgcctccagctcTGCGTGCTTTCTCTTATCCgaaaccct
ccctccgtccatccTCGccactctctccccctcctcctcctcctcctcct
cctcatcctcctcatcctcctcctcctcctgggccacgccttccttctcc
agcctggcggtcctcctcctggggcTAGGCTGGACGGGGTGCCTGCTGCA
AGCTCCCCCCGGGGAATGCCGGGCCCTCCGGAACATCCACGAGTTCTACA
AGATCGTCGAGAAGCCCATTGGCGCCGGTGGCTTTGGAGTCGTGTGCGTG
GGCTCGCAccgggagacgggggaggtggtggcgattAAGCAGCTGCCCAA
GAAGGCGATCCGGGAGCTTAAGGTGATGACGGAGGTGGACATCCTCCGGC
TGGCGGGTGAGCACCGGAACATCATCGGCTTCCGAGACCTCTTCCAGGAT
GAGGAGAACTGGTACATCGTgatggagatggcggaggggggcgagctTTT
CGACCGGCTGGTGGAACGGGGCGCCTACTCGGAGGCCCAGGCAAGTGAGA
TCATGCGGGAGATCGTCGACGCGGTCTCCTACCTGCACCAGCAGGGCATC
GTCCACTGCGACTTGAAGCCCGAGAACCTCTTGCTCGCCACCAAGGCCAG
CGACACCAGCAACATGCGCCTGGTTGACTTTGGCTCCGCTTTTCGGGCGG
ATTCGGGGAAACTCGTGTCCAAAAAAGGCACAGGGACCATCGCCTACTCC
GCGCCCGAGGTCATCTCGGGGCGCCCCTGCGGCTACAAAGCGGACGTGTG
GGCCCTTGGTGTCTTGATgtacatcctcctctccgGCTACCACCCTTTTG
ACCCCTTGAACGATGCCAACGACGACCAGATCGGGGCGCGCATCgtcaag
gagaaagagaagtaCGTCTCGTTCGAGCAGCCCGTCTGGGAACGGATCTC
CCCCGAGGCCAAGATGCTGGTGAAACGCTTGCTCTCCTCGGACGCGCAGA
CACGACCCACAGCCCAGGTAGGttgaATGTTGCAATTTTGCTCGGCGCGG
CCTGACTCGGCCAGGACAGTTTCCATGGTCCGAGCGATGGGGACAAGCAC
CATACGGTCAAGGCTTGCGACCAGAAGAGGCACCTTTAACTCACCTCTGG
CCGCATCAAGCGGCATGAGGAACACCTCAGACCCTGCCCGCCGAACCCGA
TTCTTCAGCAACGAGAGCAGAGTCCTTGGACGCCGAGGCCTTTACAGTGT
CCAAGACAAGAAGGGCAGCATCCTGTCCCCAGGAAGAATAAGACGTCGGG
CGTGGCAATTACCTGCAGCTCACGTTACCccggccagcgcctccagctcT
GCGTGCTTTCTCTTATCCgaaaccctccctccgtccatccTCGccactct
ctccccctcctcctcctcctcctcctcctcatcctcctcatcctcctcct
cctcctgggccacgccttccttctccagcctggcggtcctcctcctgggg
cTAGGCTGGACGGGGTGCCTGCTGCAAGCTCCCCCCGGGGAATGCCGGGC
CCTCCGGAACATCCACGAGTTCTACAAGATCGTCGAGAAGCCCATTGGCG
CCGGTGGCTTTGGAGTCGTGTGCGTGGGCTCGCAccgggagacgggggag
gtggtggcgattAAGCAGCTGCCCAAGAAGGCGATCCGGGAGCTTAAGGT
GATGACGGAGGTGGACATCCTCCGGCTGGCGGGTGAGCACCGGAACATCA
TCGGCTTCCGAGACCTCTTCCAGGATGAGGAGAACTGGTACATCGTgatg
gagatggcggaggggggcgagctTTTCGACCGGCTGGTGGAACGGGGCGC
CTACTCGGAGGCCCAGGCAAGTGAGATCATGCGGGAGATCGTCGACGCGG
TCTCCTACCTGCACCAGCAGGGCATCGTCCACTGCGACTTGAAGCCCGAG
AACCTCTTGCTCGCCACCAAGGCCAGCGACACCAGCAACATGCGCCTGGT
TGACTTTGGCTCCGCTTTTCGGGCGGATTCGGGGAAACTCGTGTCCAAAA
AAGGCACAGGGACCATCGCCTACTCCGCGCCCGAGGTCATCTCGGGGCGC
CCCTGCGGCTACAAAGCGGACGTGTGGGCCCTTGGTGTCTTGATgtacat
cctcctctccgGCTACCACCCTTTTGACCCCTTGAACGATGCCAACGACG
ACCAGATCGGGGCGCGCATCgtcaaggagaaagagaagtaCGTCTCGTTC
GAGCAGCCCGTCTGGGAACGGATCTCCCCCGAGGCCAAGATGCTGGTGAA
ACGCTTGCTCTCCTCGGACGCGCAGACACGACCCACAGCCCAGGTAGGtt
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