rna650, rna650 (mRNA) Nannochloropsis gaditana

Overview
Namerna650
Unique Namerna650
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length498
Alignment locationCM002456.1:84139..84465 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_103298g1.5683.mrna
Orig protein idgnl|cribi|Naga_103298g1.5683
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:84139..84465 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_103298g1gene623Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna650rna650-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM30023.1cds650Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna650 ID=rna650|Name=rna650|organism=Nannochloropsis gaditana|type=mRNA|length=498bp
ATGCACGGACGACACTTCTTCCTACAGGCCTACTCAAGCAAAGGAAAGAT
GCCAGCACAATTCCCACCCTCGTTAAAGCGCCGGATGCCTGGGTCTTTGG
CCCGTGTTCGACGATACCTCGAAGAATCATGGGGAAGCCTCCAGCCAATG
GACAATCCCCCAGGGTACGACGAAGCGCTAGGTGTCACAGCCAAAGAGGA
TAAGCCAAGGCGCTGGCGTTCCCCCCTGGAACATGCCCGCACGTGGCAGC
GTGCGTTCAAGTCGTGGCAGAATTCTTTTGACTACGACAAATTCACGCTC
GAAGGGGGCCTTGGCCGCGGTTTAGTCAGGGGAGAAGCCGGGGACAGAGC
AGACGAAGCCTTGAAGAATGGATGGTCGCCGGAGGCCGCCCGAGTCCTGG
TGGATGGGGACGAGAAGGAGGTGGAAAGCTTGGTGCGGGAGAAACTCCGA
GGGTGTCGGACCGAGTTGACCGAGGAGGAGGATGGATCTGGTAAGTGA
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protein sequence of rna650

>rna650-protein ID=rna650-protein|Name=rna650|organism=Nannochloropsis gaditana|type=polypeptide|length=108bp
MRASAFQLRITMQEFVSGYKEGRDHSAEEIQAAMTTQVSKREGGREGGRE
GKRDGRQNATWKTYCVFCPPFPFVDTILQVPLLGGRVDSGDDRRVRVSPS
SIPPSPPP
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mRNA from alignment at CM002456.1:84139..84465+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna650 ID=rna650|Name=rna650|organism=Nannochloropsis gaditana|type=mRNA|length=327bp|location=Sequence derived from alignment at CM002456.1:84139..84465+ (Nannochloropsis gaditana)
ATGCGGGCTTCTGCTTTCCAGCTGCGCATCACCATGCAAGAGTTTGTGAG
CGGCTACAAGGAGGGCCGGGACCACAGCGCGGAGGAGATCCAGGCGGCCA
TGACGACGCAGGtctcgaagagggagggagggagggagggagggagggaa
ggaaagagggatggaagacaGAATGCGACGTGGAAGACTTACTGCGTgtt
ttgccctccctttccttttgtAGATACAATCCTTCAAGTCCCTCTtcttg
gagggagagtggaCAGCGGAGACGATCGAAGAGTACGtgtctccccctct
tccattcctccctccccccctccctaa
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Coding sequence (CDS) from alignment at CM002456.1:84139..84465+

>rna650 ID=rna650|Name=rna650|organism=Nannochloropsis gaditana|type=CDS|length=327bp|location=Sequence derived from alignment at CM002456.1:84139..84465+ (Nannochloropsis gaditana)
ATGCGGGCTTCTGCTTTCCAGCTGCGCATCACCATGCAAGAGTTTGTGAG
CGGCTACAAGGAGGGCCGGGACCACAGCGCGGAGGAGATCCAGGCGGCCA
TGACGACGCAGGtctcgaagagggagggagggagggagggagggagggaa
ggaaagagggatggaagacaGAATGCGACGTGGAAGACTTACTGCGTgtt
ttgccctccctttccttttgtAGATACAATCCTTCAAGTCCCTCTtcttg
gagggagagtggaCAGCGGAGACGATCGAAGAGTACGtgtctccccctct
tccattcctccctccccccctccctaa
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Synonyms
Publications