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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100325g3.3135.mrna |
| Orig protein id | gnl|cribi|Naga_100325g3.3135 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:649968..651523 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6499 ID=rna6499|Name=rna6499|organism=Nannochloropsis gaditana|type=mRNA|length=1991bp
GAGACGATCGACTTAAGATCCTTATTTTGTAGCCAAGGCAGTTGATGACG
AATCAAAATTGAGCTTCTAGTTTTGTTAAATCGTGTTTCTTTCCTCTTAT
CTGACGAAAATCAGCCCGGAGGGGCTCTTGATCCGCATCTACCCTAACAG
GAAGCAAGCACGGCGCACCCAAATGCGAAGAATTTTGCAAGAAGGGCGCA
GACATACCCGGGGAACCTTCAACATCTCCAGTCACTCACAACCTTTTCAT
GCCTTGAGACTTCCTCCCACTTTTAGCCGACCTCCGCTTCTTCCTGCCTC
TCTGGGTCTTCGATTCATCAGGATCGGCCGGAAAGGGGAAGATGGCCCTC
ATTTTTCAACGCAAAAGGACGAGACCAAGAGGGCACCGCAACGCACCTCC
CTGTCTCCCTACGAGATTGTTGCCACAAAACTCGGGCGCTTTGACCGACA
ATTGCAGGCGTTGCAGGTAGACGCCGAGGGGGAGGTGAGCACATGCACGA
CTTCCATCAAAGAGCTCTTACTGGACACCCAAATGCACGTCAGAGACCTG
ATCGCGCTCTCTCCCGAGGCCCTTCGTAAGCGGGGCGGTCGCCTGACTCC
CTGTATCCTCCCCCGGAAAGACGTAATCGTCTTCGTGATGCATCCCTTGC
GCCTCGTGATTTCCAAGAACAGTTGTCTGGCCTTCGATCCCGGGGACCCC
ACCGTTCAGTCTGTCATCGCCGACATTTCTTCCGCCATCAAGATCCAGCA
GTTGGAGAGGGCTCACCTGGCCAAGTCGGGGAATGGGTCGGTCCTAGAGC
CGTACACCATTTCCTACGAGCTGGTGGTGCTGGAGCAGGCCTTACGCAGC
TTCTGCAACCAGTTCTCCCGCATCAAGGAGCTCCTGGGCTTGATCGTCGA
GACCTCATTGAAAGCCCTGGTCGACTCACAAGGATCCGACCAGGAAGAGC
AGCTGTACAGGCTCGTGCCCCTCAAGGACGGGTTATCGGTGGCGCAACAC
AACATGCAGGAGGCCGTGGGGGTCTTGCAGCAGCTCGTGGACTGCGACGA
GGACATGCTCGCCATGCTCCTCACAGAAAAAGCCGCGTTGCAGAAGGAGA
AGGCACGCGTCTCCAGCCAAGCGGCCCGACTGGACCTCAATCTGCACTCG
GACGTGGAGCTCCTGTTGGAAAACTACCTTCGGGAGTTGATTCTCACGGG
GCAGCAGATCAAGATGCTGCAGGCACGAGTTCAGAGCGCGCAGGAGGTGT
TCTCCATCAACGTGGATCTGATGCGGAACCGCGTGCTTCGTATCACGCTG
CTCCTGACCATCCTCAGCACCAGCCTCGCCTCCGCCGCCACCATTGGCGC
ATTTTTTGGCATGAACGTCCGGCTGCCCGAGTCCCTCGAAACCCATCCGG
AGGCCTTTGCCTGGATCACGGTCGGCTCCATCTGCCTGGGGGCAGGTCTC
TTCGCTTTGGCCGTCGCCTTTGCCAGGGGGCACGGGAAGGATCGGGTCCG
TCGAGACCTCCAGTCCGTGGCGGCCTTCCAATCCATTTTCAAGCACATCC
GTTCCGTCAGTCAAGCCATCTACCAGACATCTCTAGACCCGAAAGAGGTG
GCCATGGGGAAAACGAAGGAGTCCCGCGCCTACTTTCGGAAGATGCTCAG
CGCGCACCGGAACTACGAGGTGTCGTGGGAGGAGGTGGACGTCTTGATGG
ACGTCCTCGGGGCCTCGGCCGACCAATTCCGGCAACAACAGAAGTACAGC
GACGAGACGAGCGAGGCGACCATCTATCGGAAGCTCTTCGAGTCCCTGGC
CGCGCAGGAGAGGCAGGAGACGTCGGGGGACGAGGATCTCGAGGCAGCGG
GGAGAGAGGCGCGTGATCGGGTGGCGGAGGCCAGGAGAGAGAGGCCGCCG
GTCTGAAGATCGTAAGGGGCTGTTTATATGGTGAAAAAGCAAATGTACGG
ATGCTTTTTCGAAAGCCATCCCTCAAATCAAATTCACGTCC back to topprotein sequence of rna6499 >rna6499-protein ID=rna6499-protein|Name=rna6499|organism=Nannochloropsis gaditana|type=polypeptide|length=294bp
MVAMVAPKCFTDRTHALYRTRSLHRLVKMSNSSAKTKGQATGGVETGGRG
TTGAAKAGGHVKSNASYHKGPAYEGDENLEDGEFYSLTSVGTLIVRIVAA
RNLPAAVGGGFFSNGHSNPYAILEFEGSVQGTSVVPHTLDPVWPREQYFF
QVKMPVLHADEDREGEGGGGGSYSGRLPAVFKEGIKGGQGEYDPLMKKSK
GKEEQTTMFSSAEPHLNVKLVHRHDGALSASPIPPPASAASTASTARAQA
SSPGRSRGRGVEGAGDGTEDPTEFTKPGRAGGGERPPSLPTTGS back to topmRNA from alignment at CM002468.1:649968..651523+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6499 ID=rna6499|Name=rna6499|organism=Nannochloropsis gaditana|type=mRNA|length=1556bp|location=Sequence derived from alignment at CM002468.1:649968..651523+ (Nannochloropsis gaditana)
TGTCGTACATGTGGACGGCGCAATATATCTTTAGGGAGGGGGCAGTGGAG
CATGCGCGTCTTCTTGACGTACGGAGTCTCTGAACAGGCTCCCGTGCAAC
GCGTGAACCAGAACAATGGTAGCCATGGTAGCACCAAAATGTTTCACTGA
TCGTACCCACGCTTTGTACCGCACAAGGTCCTTGCACAGACTCGTAAAGA
TGAGCAACAGCAGCGCCAAAACTAAGGGACAGGCTACAGGCGGCGTCGAg
acgggcgggcggggaacTACGGGGGCTGCAAAGGCCGGTGGTCATGTCAA
AAGCAATGCCTCCTACCACAAAGGACCCGCTTATGAGGGAGATGAAAATT
TGGAGGACGGCGAATTCTATAGTTTGACGAGTGTGGGCACCTTGATTGTA
CGCATCGTCGCGGCCAGGAATTTGCCGGCGGCAGTGGGGGGAGGTTTCTT
CTCGAACGGCCATTCCAACCCGTACGCCATACTCGAGTTTGAAGGGAGCG
TGCAGGGTACGTCCGTAGTGCCCCATACGCTGGATCCGGTGTGGCCCCGA
GAGCAGTACTTTTTCCAGGTGAAAATGCCCGTCTTACACGCCGacgaaga
cagggagggggagggagggggagggggatctTACAGTGGGCGGCTCCCAG
CCGTCTTTAAGGAGGGGATTaaagggggccagggggagtACGACCCGTTG
ATGAAAAAATcgaagggcaaggaagagcaGACAACCATGTTTAGCAGTGC
GGAGCCGCATCTGAACGTGAAGTTGGTGCATCGCCACGACGGCGCTCTCT
cggcctcccccatccccccgcccgcctccgcggCATCCACGGCATCGACC
GCCCGAGCACAGGCCTCGAGCCCCGGTCGTAGCcgcgggaggggcgtgga
aggggcgggggacgggacggaggaccCGACGGAGTTCACCaagccgggga
gggcgggggggggggagaggcctccctccctcccgacgaCCGGCTCCTAG
GGGAGGCGTATATCAACGTGGTGGACGTGGCGACGGCGCGCGTCAAGGCC
CTGGATGCCTGGTTCCCCCTGAGCGAGGGGGGCGCCGTGCGGCTGGTGAT
CGAGTACGacgtgctggaggcggcgccAGTGGTGGGGGAGAGTGTGCGTC
TGCTTGGTTTTGGCGAAGCGGGAGACTGGTGGCCCATGCCCTTGAAGGAA
GCGATGCGGGTGGAGGAACAcgtggacgtggacggcgAGCGTCTCTTGGT
CTCGTGGCAGACCTCGGAGGGCTGGCGCTGCCAGGGGGAGGTGCATCGCT
TCCACGTGATGAGTTCGGAGCGGCATCAGTCGGGCATGAGCGAGTACGAG
GACCGGGCGCTGGCTCTGGCCCTGGCCTTGCAGGAGATgccggcggcggt
ggcggtgggggaggtgctcGACCGTCTCTGCGAGGGGGAGTcggtggggg
aggttgcAGAGGCCGTGTGGACCGGGGTGGAGAGgacgtgggagaggtgg
tgggagggcgggatggggcTGGCCGTGAGTGACGTGCGGCGGGCGTTTCG
GCTCCC back to topCoding sequence (CDS) from alignment at CM002468.1:649968..651523+ >rna6499 ID=rna6499|Name=rna6499|organism=Nannochloropsis gaditana|type=CDS|length=885bp|location=Sequence derived from alignment at CM002468.1:649968..651523+ (Nannochloropsis gaditana)
ATGGTAGCCATGGTAGCACCAAAATGTTTCACTGATCGTACCCACGCTTT
GTACCGCACAAGGTCCTTGCACAGACTCGTAAAGATGAGCAACAGCAGCG
CCAAAACTAAGGGACAGGCTACAGGCGGCGTCGAgacgggcgggcgggga
acTACGGGGGCTGCAAAGGCCGGTGGTCATGTCAAAAGCAATGCCTCCTA
CCACAAAGGACCCGCTTATGAGGGAGATGAAAATTTGGAGGACGGCGAAT
TCTATAGTTTGACGAGTGTGGGCACCTTGATTGTACGCATCGTCGCGGCC
AGGAATTTGCCGGCGGCAGTGGGGGGAGGTTTCTTCTCGAACGGCCATTC
CAACCCGTACGCCATACTCGAGTTTGAAGGGAGCGTGCAGGGTACGTCCG
TAGTGCCCCATACGCTGGATCCGGTGTGGCCCCGAGAGCAGTACTTTTTC
CAGGTGAAAATGCCCGTCTTACACGCCGacgaagacagggagggggaggg
agggggagggggatctTACAGTGGGCGGCTCCCAGCCGTCTTTAAGGAGG
GGATTaaagggggccagggggagtACGACCCGTTGATGAAAAAATcgaag
ggcaaggaagagcaGACAACCATGTTTAGCAGTGCGGAGCCGCATCTGAA
CGTGAAGTTGGTGCATCGCCACGACGGCGCTCTCTcggcctcccccatcc
ccccgcccgcctccgcggCATCCACGGCATCGACCGCCCGAGCACAGGCC
TCGAGCCCCGGTCGTAGCcgcgggaggggcgtggaaggggcgggggacgg
gacggaggaccCGACGGAGTTCACCaagccggggagggcggggggggggg
agaggcctccctccctcccgacgaCCGGCTCCTAG back to top
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