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Properties
| Property Name | Value |
|---|
| Product | glycerol-3-phosphate dehydrogenase |
| Orig transcript id | gnl|cribi|Naga_100217g6.6979.mrna |
| Orig protein id | gnl|cribi|Naga_100217g6.6979 |
| Gene | GPD |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:606623..608816 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6481 ID=rna6481|Name=rna6481|organism=Nannochloropsis gaditana|type=mRNA|length=3311bp
CCCTTTAACAGCCATGGTGGACATGTTGGACACGGCTCCCACGCTAGTCG
CAACATCACACAGTCATGTTGCGGGATGCTCAAAACAGATTTCTGGTTTC
AAGCCTGTTGTTGCGCTAAGTCCTGCGTCCTCGAAAGCCGCTGCACCCTC
CTCCGGCGGGGTGTCTAGACGCGCTGTGTTGGTAATGGATGGTCCACACT
TGCACAAAGCGCTCGACGCTTATTTTCCAGGATTAACCCAAGACGAACTA
CCTGTTGTCGTGCAGGGGCTGATGGCTTCCTTGGAAAGCGAGTTTCGCGT
CACTTTTAGCAAAAGGTGCGTTTTGGTGGACGGGCACATAAGAATCTGAC
ATTCGGACAGCCCCCGGCCTCCCAAAAAATCGGAGGGGTCCCTTTGTTAA
AGATGTTTCCATATCATATCCCAAATAAATGCATGATCGTGTCCTAGCAT
GTTTTTGATTGACATTTTAAGCGGGAGCAGAGGCTGAAATGATATTGGTG
GTGAATTTCGTGTAGTCATGTCCGTCAACGTATGTACCCCCCCCCCCCCC
GGCGGACCCTGTTCGGACAAGCGCTTTTCCAGCCACTTGATGATAAGCGC
TCTATATCCAGAAGTATAAGACGTGATATAGTAGTACATACTTGTATTGT
GAGATGCTCAACCTGTATTTCATACCCCTTGGTTTGCGATGGCATTACCT
GGACCCATGCAGCCTTCCAGATTCATCTCCCCCATCCCCTACCTTCCCCT
TCTCAGTCACGCCTCACCCGCTTTATCCCACACTACAGCATCTTCCATGA
CTGCAGTACAGCACTGGGCCAGCCTACCGCATTGGGACGTCTCTTGGCGG
CACCCCCAATCGCGGCTCGTATCCGCATGCATGCTGTGAAAGCAGTGGCA
GGCGCCGCCGTTGACCCGCACACGTGGGAACCAGTCCGCCAAAGCAGCAC
GAGTAGCCTCTACAGCAGTAATAGTGGAAGCAGCAGCAGTATTGCATCGC
TGTACGGGGGCGGAGAGAACATGCAGGGCGGTGAAAAGACCACCCTTTTG
ATCGAAAGCGGACTGGATGTCTCCATGAGCCTGGATTTGCTCCGCCACGC
TTCCGGCGCGCCCGCTGCCGGTCCACAGGATAGCTCTCAACCCACGGTGC
TAGTAGTTCTAAGTGCACGACCCGAGCTTTCGGAGACTTTGGACGTGATA
GCGGGTAGGAGTGGATCGGTCTTTGTGATCGGTCTCCAGAAAGAATTGTA
CGGCACACCGCTCTCGCAATTCGTGACGGGGGGAATCACGCTGGACGGGC
TCCTTGTCAGCGCAGCCGAAGCCCTTTTGTGGCACCGTCGTCGGTGCAGG
CAGCATTTACAGCAGCGCCAACTTCAGCAGCAACAGCGACGGCAAAGCTT
ATCTCCCCGGGCGGATTTCTGTCCCCATGGGCCGGCTTGTGACTACCTTC
GCGGCACTGCGGCTTACATGTCAGGAGGCGCGAGCAAATATAACCCCTTG
GATGGTACTATCAGAACCTGTGCACACTGGAAGGAAGTGAACCAGTCCCA
CCGCTCCTCTCCAGCTGGGGGGAGCGGGGGAGGAAGCGGGCAGACGAGCC
CTCGCCCCTTCTCGAAGAGTAAACTTGACCATCTCACTGCCTTCCAGCAC
ACATGTGGTGCAGGCAGGACGTGTCGCAATGGCGGTCCTTACCATCAAAT
GGCATTTCCTCATGTCAGCTCCATCACAAGCAGCTGCAGCAGCAGTAGCT
GTGGTCATAGCAAGGGCATGGGTGTCAACCACGGCAACTTCCGGGAAGCA
TGCACTAAAAGAGAGAGTCCCGCCGAGCGACAGGCCTCGTATACCAGTCA
CGATGAATGTGATAGACGTCACGTTTGCAACCACTCCAGCGAGCGCGGCA
ATCGTGGCGACTTCACGGGTCAGGTCGGGGGCGGTCCATTCCGTCCAGCC
ATGGCCTCTGCCGCCCCTTGTGACCGCTCGGCAGCCATTACATCGGTGAC
GGAGCTCCCTGAAGGGAGGGGGAAAGGAGCGACGCGCGAAGACGACGGAT
GGCTTGAGGAGGCAGTCCGGAAGGACTTTTACGGGGAAGAGGGAGAGGCG
TCGCAGGTGACAGCTGACGAGGAGGAGGACGAGGAGACAGCGGCGGTGGT
GGGACTGCGGGGATGTCTTCCCTCGGTCTCGAAGAGGTCCTCAAATTGGG
GCCGAGCGAAGCAGGGCGAGATTGGGAAGCCCGTCTGGTGGCAGCGGCTG
CGGAGGAGTCACAAGGACGATGAAGAGGAGGATGGCGGTGAAGACGGTGG
CGGGCGTTTGGAGGAGATGGCCGAACTGGAACCAGGCCGTGACCACCGCG
GAGAAGGTGACGAAGAGAGAGATGCAGTCCTGTTCCCAATGTCCTTATAA
GCGCAGAGGAAGTCACGCGAGATATATTCCGTGAGAAATTCGTACGAGTA
GTTCCAATCGTGACGTGCGCTGTAGTAGCCCACTCACAGGGGAAGAGTAA
GGTCGGTGGAAGTGTAGGCAAGGTTTGTATACGATCAAGGGCAACGATTA
TGCCGGAATGCTGGCGCGAATTATTTGCGAGGCAAAGCCGGAGGACCGAG
TAAATATAGATAGGATAGGCGACGTGCACGAGAGGGACTTTTAAGGGGAT
CCCTCCTGCATTGAGAGACGCATCGCATATAGTGGCCTTTTTCACTTTTT
GATCACACTCGTGCGCGCACATATTCGGGAAAAAGTGTCCTTTGTCTGAC
TGGCCTTTGCATCAGAAAGGGAGTAAGTAAGGGAGACAGTGAGACGAGAG
AGGTGAATGGCGCCGGTTGGGTTATGAAATGCAGCGTTGGATGCGATTCA
TTGTAGCGAGCATGCTGAAGGCGAGCAAGGGAATCTTTCAATCGAGCGAA
ATAAAACATTTGTTGAATTGAGCGCATTCATGTGAGTTGTAGGCTTGTGA
AATTGTAGGAGATTGTAGTGTAGGCTAGAGGCAGAGCAATAGCTGAGTGT
GGTTTTGGGTCGTCACTCTTTGTACCTCCCCCGGTGCTCCACCTCATCGA
AAGAGGCGTTCAGTGCATGGGAAGCTGATTCGTATAGAAGTGCATTTTGG
CTTGGAAGGCAGGTTTGATTTGCATGGGTGTATGAATTTGGTGGGTGGGG
AAGGGTGTGTCGGAGGGGACCGAGGTCACAAGCAATGTGTAATGGGTGGA
GTATAATGAACGGGAACAGTAATAGTAGATGGATTGGCTTCGGGTAATCC
TGGGAATAGAGGGACGCTTCGGAGAGGCGATCAATGAAGATGTGTACACA
CGCCCCCCACA back to topprotein sequence of rna6481 >rna6481-protein ID=rna6481-protein|Name=rna6481|organism=Nannochloropsis gaditana|type=polypeptide|length=429bp
MSPTFRRRHSNAPFKLQIFMVKFLAVVALLGCCCLHGVASGTPPHAAFVP
RASTKSLGNRLAKAPQARREQTIMQLSARRSRSMRPLPYPVRFAVLGGGS
FGLALASVLGKKSIPVTILVRKEEVAEHINLHHRHPTYLSDIALAPSIRA
TVQPEEALRDASFIIHAVPVQYSRKFLEDIAPHVPKNTPIISTSKGIETG
TLCMMQDILLETLGPNRETAYLSGPSFAREIALGLVTAVVAASESEALAN
EICDIMGCNYFRVFTSTDVVGVEVGGAVKNVIAIAAGMCEGLGLGTNAMA
ALVTRGCNEMQRLALSLGARPSTLTGLSGVGDTFGTCFGPLSRNRNLGVR
LGKGERLENILGSSTEVAEGHATAFSLVQLIEKTNRAYRRELEFPIIYGV
KEILEGKRTPAEGLRDLMAMPVRVEMWNL back to topmRNA from alignment at CM002468.1:606623..608816- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6481 ID=rna6481|Name=rna6481|organism=Nannochloropsis gaditana|type=mRNA|length=2194bp|location=Sequence derived from alignment at CM002468.1:606623..608816- (Nannochloropsis gaditana)
TATCCTGAGCTCGATAGCGGCCCCACTACCCTCCTTCACCGGACTGGCAG
GGCCACGCCATGGTCTTAGCTACACACTTTGTCAGTATGCGCAAACATAT
GGGCATGCAAGGGCCAACAGGGCATCCCATTCGCCTTGATCGCTCACATA
AAAGTGTCTCGCCCGTCCCCCTCTCACTGCTGCCACACACCTTGCAGGGG
CCGAGGGAGCTCAGCGCTTGCGTACCCCCTTCCTAGCCCCATTAAACTTC
ACACACGGGGGCGGAGACCTGACTTCTGGACCAGCATAGCCATGAGTCCA
ACCTTTCGAAGAAGACATTCAAATGCCCCCTTCAAATTGCAGATATTTAT
GGTCAAATTTTTGGCGGTGGTCGCCCTCCTCGGATGTTGCTGTCTTCATG
GCGTTGCTTCCGGGACTCCCCCGCATGCCGCATTTGTTCCGAGAGCAAGT
ACGAAAAGCTTGGGTAATAGGCTCGCAAAAGCCCCACAAGCAAGACGAGA
GCAGGTAAGGGCCATGGCATTGGTATCATTGGACGGATCGTGAGAGAACC
CAGACTGCTCTCTGCTAGGAGTACATCGTTTTATCTCCTCCCTTGACCCA
TTTCTTCACATCCATATTCATATTTTACCCGTCCCACCTGTTTTGGATGA
ATACAGACAATAATGCAGCTTTCTGCAAGAAGAAGTCGCTCCATGCGGCC
ATTGCCCTATCCTGTTCGTTTTGCGGTGCTTGGTGGGGGCTCCTTCGGGC
TTGCTTTGGCCTCCGTGCTGGGCAAAAAAAGCATTCCGGTCACGATACTG
GTGCGAAAAGAAGAAGTTGCCGAGCACATTAACCTACATCATCGTCATCC
TACCTATCTCTCCGACATCGCTTTGGCACCCAGCATTCGCGCCACTGTGC
AACCTGAGGAGGCGTTGAGAGACGCATCCTTCATCATCCACGCAGTCCCC
GTCCAGTACTCTCGGAAATTTCTTGAGGACATAGCCCCACATGTACCGAA
GAATACGCCCATTATTTCCACGTCGAAGGTACGCATTTTCCGGAAGCTTC
TGTTGGTGGATTGTCATCATTTTTGTAGCGTGTCGAAGTGCATAAAGCAG
GGTTTAACTTCGTGGTTATGGGACATGCGAGCTGTCGTATTCTCTCTTTT
CTCTTTAGGAGCCAACATGCGTCCATCTCGAAGGCGTGCACGCTAATTCA
CCTTTCCAATCCCCCCTCCCTCAGGGCATCGAGACGGGGACCCTCTGCAT
GATGCAGGACATCCTCTTGGAGACGCTGGGTCCGAATCGCGAGACCGCGT
ACCTGTCGGGGCCCTCCTTTGCCCGGGAAATTGCCCTTGGTCTGGTTACG
GCCGTTGTGGCGGCCAGTGAGTCGGAGGCTCTTGCCAATGAGATCTGCGA
CATCATGGGCTGCAACTACTTCCGGGTATTTACCTCGACAGACGTGGTGG
GGGTGGAGGTTGGTGGTGCGGTCAAGAATGTCATTGCCATTGCGGCCGGC
ATGTGTGAAGGGCTCGGGCTTGGGACGAATGCCATGGCCGCCCTAGTGAC
CAGGGGTTGCAACGAGATGCAAAGGCTGGCTTTGAGCCTAGGGGCGCGGC
CATCAACCTTGACTGGCTTGAGCGGCGTAGGCGACACCTTCGGCACGTGT
TTTGGGCCGCTGAGTCGTAACCGAAACCTTGGCGTGCGCTTGGGGAAAGG
AGAACGACTCGAAAATATACTAGGGTCGTCCACCGAAGTGGCGGAAGGGC
ATGCAACGGCGTTCTCGTTAGTGCAACTGATCGAAAAGACAAACCGGGCG
TATCGCCGAGAACTGGAGTTTCCGATTATATATGGGGTCAAGGAAATATT
GGAGGGGAAAAGGACACCCGCGGAGGGGTTGCGGGATCTGATGGCCATGC
CTGTCAGGGTGGAAATGTGGAATCTATGACTTAAAGACAAGGAAGCAGGA
GGGCTCGGATGTGGTAGACTTTGAAGTCGACTGGGAGGATCATATTACAT
GGAAGAATAAAGTAGCATCAACAAGTCAGACGCGGTCAATCAGTAACATG
ACGAGAAAGCGCGAGGAGGGCAAAGCAAACGAGCGGCTGCATGCCAAGTT
TTTTGAGAGGGAGGACGATTTTTTTAACCCCTTACAAATTTGTTGCTATC
GTTCGGATAAAACTACTTTGGTGTAAATGAAAATATCTTATACC back to topCoding sequence (CDS) from alignment at CM002468.1:606623..608816- >rna6481 ID=rna6481|Name=rna6481|organism=Nannochloropsis gaditana|type=CDS|length=3870bp|location=Sequence derived from alignment at CM002468.1:606623..608816- (Nannochloropsis gaditana)
GGCATCGAGACGGGGACCCTCTGCATGATGCAGGACATCCTCTTGGAGAC
GCTGGGTCCGAATCGCGAGACCGCGTACCTGTCGGGGCCCTCCTTTGCCC
GGGAAATTGCCCTTGGTCTGGTTACGGCCGTTGTGGCGGCCAGTGAGTCG
GAGGCTCTTGCCAATGAGATCTGCGACATCATGGGCTGCAACTACTTCCG
GGTATTTACCTCGACAGACGTGGTGGGGGTGGAGGTTGGTGGTGCGGTCA
AGAATGTCATTGCCATTGCGGCCGGCATGTGTGAAGGGCTCGGGCTTGGG
ACGAATGCCATGGCCGCCCTAGTGACCAGGGGTTGCAACGAGATGCAAAG
GCTGGCTTTGAGCCTAGGGGCGCGGCCATCAACCTTGACTGGCTTGAGCG
GCGTAGGCGACACCTTCGGCACGTGTTTTGGGCCGCTGAGTCGTAACCGA
AACCTTGGCGTGCGCTTGGGGAAAGGAGAACGACTCGAAAATATACTAGG
GTCGTCCACCGAAGTGGCGGAAGGGCATGCAACGGCGTTCTCGTTAGTGC
AACTGATCGAAAAGACAAACCGGGCGTATCGCCGAGAACTGGAGTTTCCG
ATTATATATGGGGTCAAGGAAATATTGGAGGGGAAAAGGACACCCGCGGA
GGGGTTGCGGGATCTGATGGCCATGCCTGTCAGGGTGGAAATGTGGAATC
TATGAACAATAATGCAGCTTTCTGCAAGAAGAAGTCGCTCCATGCGGCCA
TTGCCCTATCCTGTTCGTTTTGCGGTGCTTGGTGGGGGCTCCTTCGGGCT
TGCTTTGGCCTCCGTGCTGGGCAAAAAAAGCATTCCGGTCACGATACTGG
TGCGAAAAGAAGAAGTTGCCGAGCACATTAACCTACATCATCGTCATCCT
ACCTATCTCTCCGACATCGCTTTGGCACCCAGCATTCGCGCCACTGTGCA
ACCTGAGGAGGCGTTGAGAGACGCATCCTTCATCATCCACGCAGTCCCCG
TCCAGTACTCTCGGAAATTTCTTGAGGACATAGCCCCACATGTACCGAAG
AATACGCCCATTATTTCCACGTCGAAGATGAGTCCAACCTTTCGAAGAAG
ACATTCAAATGCCCCCTTCAAATTGCAGATATTTATGGTCAAATTTTTGG
CGGTGGTCGCCCTCCTCGGATGTTGCTGTCTTCATGGCGTTGCTTCCGGG
ACTCCCCCGCATGCCGCATTTGTTCCGAGAGCAAGTACGAAAAGCTTGGG
TAATAGGCTCGCAAAAGCCCCACAAGCAAGACGAGAGCAGGGCATCGAGA
CGGGGACCCTCTGCATGATGCAGGACATCCTCTTGGAGACGCTGGGTCCG
AATCGCGAGACCGCGTACCTGTCGGGGCCCTCCTTTGCCCGGGAAATTGC
CCTTGGTCTGGTTACGGCCGTTGTGGCGGCCAGTGAGTCGGAGGCTCTTG
CCAATGAGATCTGCGACATCATGGGCTGCAACTACTTCCGGGTATTTACC
TCGACAGACGTGGTGGGGGTGGAGGTTGGTGGTGCGGTCAAGAATGTCAT
TGCCATTGCGGCCGGCATGTGTGAAGGGCTCGGGCTTGGGACGAATGCCA
TGGCCGCCCTAGTGACCAGGGGTTGCAACGAGATGCAAAGGCTGGCTTTG
AGCCTAGGGGCGCGGCCATCAACCTTGACTGGCTTGAGCGGCGTAGGCGA
CACCTTCGGCACGTGTTTTGGGCCGCTGAGTCGTAACCGAAACCTTGGCG
TGCGCTTGGGGAAAGGAGAACGACTCGAAAATATACTAGGGTCGTCCACC
GAAGTGGCGGAAGGGCATGCAACGGCGTTCTCGTTAGTGCAACTGATCGA
AAAGACAAACCGGGCGTATCGCCGAGAACTGGAGTTTCCGATTATATATG
GGGTCAAGGAAATATTGGAGGGGAAAAGGACACCCGCGGAGGGGTTGCGG
GATCTGATGGCCATGCCTGTCAGGGTGGAAATGTGGAATCTATGAACAAT
AATGCAGCTTTCTGCAAGAAGAAGTCGCTCCATGCGGCCATTGCCCTATC
CTGTTCGTTTTGCGGTGCTTGGTGGGGGCTCCTTCGGGCTTGCTTTGGCC
TCCGTGCTGGGCAAAAAAAGCATTCCGGTCACGATACTGGTGCGAAAAGA
AGAAGTTGCCGAGCACATTAACCTACATCATCGTCATCCTACCTATCTCT
CCGACATCGCTTTGGCACCCAGCATTCGCGCCACTGTGCAACCTGAGGAG
GCGTTGAGAGACGCATCCTTCATCATCCACGCAGTCCCCGTCCAGTACTC
TCGGAAATTTCTTGAGGACATAGCCCCACATGTACCGAAGAATACGCCCA
TTATTTCCACGTCGAAGATGAGTCCAACCTTTCGAAGAAGACATTCAAAT
GCCCCCTTCAAATTGCAGATATTTATGGTCAAATTTTTGGCGGTGGTCGC
CCTCCTCGGATGTTGCTGTCTTCATGGCGTTGCTTCCGGGACTCCCCCGC
ATGCCGCATTTGTTCCGAGAGCAAGTACGAAAAGCTTGGGTAATAGGCTC
GCAAAAGCCCCACAAGCAAGACGAGAGCAGGGCATCGAGACGGGGACCCT
CTGCATGATGCAGGACATCCTCTTGGAGACGCTGGGTCCGAATCGCGAGA
CCGCGTACCTGTCGGGGCCCTCCTTTGCCCGGGAAATTGCCCTTGGTCTG
GTTACGGCCGTTGTGGCGGCCAGTGAGTCGGAGGCTCTTGCCAATGAGAT
CTGCGACATCATGGGCTGCAACTACTTCCGGGTATTTACCTCGACAGACG
TGGTGGGGGTGGAGGTTGGTGGTGCGGTCAAGAATGTCATTGCCATTGCG
GCCGGCATGTGTGAAGGGCTCGGGCTTGGGACGAATGCCATGGCCGCCCT
AGTGACCAGGGGTTGCAACGAGATGCAAAGGCTGGCTTTGAGCCTAGGGG
CGCGGCCATCAACCTTGACTGGCTTGAGCGGCGTAGGCGACACCTTCGGC
ACGTGTTTTGGGCCGCTGAGTCGTAACCGAAACCTTGGCGTGCGCTTGGG
GAAAGGAGAACGACTCGAAAATATACTAGGGTCGTCCACCGAAGTGGCGG
AAGGGCATGCAACGGCGTTCTCGTTAGTGCAACTGATCGAAAAGACAAAC
CGGGCGTATCGCCGAGAACTGGAGTTTCCGATTATATATGGGGTCAAGGA
AATATTGGAGGGGAAAAGGACACCCGCGGAGGGGTTGCGGGATCTGATGG
CCATGCCTGTCAGGGTGGAAATGTGGAATCTATGAACAATAATGCAGCTT
TCTGCAAGAAGAAGTCGCTCCATGCGGCCATTGCCCTATCCTGTTCGTTT
TGCGGTGCTTGGTGGGGGCTCCTTCGGGCTTGCTTTGGCCTCCGTGCTGG
GCAAAAAAAGCATTCCGGTCACGATACTGGTGCGAAAAGAAGAAGTTGCC
GAGCACATTAACCTACATCATCGTCATCCTACCTATCTCTCCGACATCGC
TTTGGCACCCAGCATTCGCGCCACTGTGCAACCTGAGGAGGCGTTGAGAG
ACGCATCCTTCATCATCCACGCAGTCCCCGTCCAGTACTCTCGGAAATTT
CTTGAGGACATAGCCCCACATGTACCGAAGAATACGCCCATTATTTCCAC
GTCGAAGATGAGTCCAACCTTTCGAAGAAGACATTCAAATGCCCCCTTCA
AATTGCAGATATTTATGGTCAAATTTTTGGCGGTGGTCGCCCTCCTCGGA
TGTTGCTGTCTTCATGGCGTTGCTTCCGGGACTCCCCCGCATGCCGCATT
TGTTCCGAGAGCAAGTACGAAAAGCTTGGGTAATAGGCTCGCAAAAGCCC
CACAAGCAAGACGAGAGCAG back to top
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