rna6476, rna6476 (mRNA) Nannochloropsis gaditana

Overview
Namerna6476
Unique Namerna6476
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2056
Alignment locationCM002468.1:594147..595020 -

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Properties
Property NameValue
Productmyosin-like protein
Orig transcript idgnl|cribi|Naga_102203g1.543.mrna
Orig protein idgnl|cribi|Naga_102203g1.543
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:594147..595020 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102203g1gene6258Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6476rna6476-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24213.1cds6460Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6476 ID=rna6476|Name=rna6476|organism=Nannochloropsis gaditana|type=mRNA|length=2056bp
CGGGTTGTCTGGGGTCGGGAGCATCCCTCATATCGCGCTCCGAGGCAAGA
AAGATTCGTCCTTCCGGCCTGTCTCCAAATTACGGCCCCGCAACCCTTTG
GTGGTCGACGGGGCGTCGTCTGTTACGGAGGTGGTGAAGGCGATGGTCCA
CAAACGCACAGACGCGGCGCTAGTGACTTCCCGGACGGGAAAGGTCTTGG
GCATTTTAACAGACAATGACGTGACGCGCCGGGTGATTGCACAATACAGA
GCGGAGACCGAGACCCCCATAAGCACCATCATGACTGAGAACCCCAAGTT
TGTTTCGCAAGACAGTGACAGTATCGATGCGCTGACCACTATGGTGAAGG
GCCGCTTCCGGCACCTGCCTGTGATGGGCCCGCATGGTCAGGTAGTGGGC
TTGTTGGACATCGCCAAGTGTTTAAGCGACGCGATCACCCGACTGGAGAG
GAGAGAAGAGAAAACTGCCTCTTCCCTGGCAGCCGCATCGGCGGGCGTCG
CCCAGGGGGGCCATGGAGCTTTGATGCACCTCATGCAGCTGTTGCAGGAG
CAATCAGAGCCGGGTAGAGACTGTAACCCTTCTCTGCGAGCATTATTAGG
GCAGCAGGGGGCACCGACCAACATTGTCCGGGCCACTGTGAACGTACGCA
CGGCCGCCGAAGTCATGAGTAAGTGTCGGAAGGCGGTGTTGGTGGTGGAT
GAGGATGAAAGCTTGGTTGGGATCTTCACCCCCAAGGACATGCTAGGCAG
GGTGGTGTCCCAGGAACTGAGCCCAGATTTCACGGCGGTCTCGAGTGTTA
TGACGGCCCGGCCAGACACGATCGAGGCAGAGGCCACGGTCTTGGAGGCC
TTGTACATGATGCGCGAGAACCATTATCTGCACCTACCCGTGACGGACAG
CCGGGACGGGTCGGTGGTGGGGCTGGTGGACGTCATGGAGATTGTGCACG
TGGTCTGCGGCCGGGAGGATGGAGGACGTCAGTTCTGGGCCTCCGCGCAG
GAGAGCGGACGGAAGGGACGGGGGGAAGGGGAAGGGTGGTCGTCCGCATC
CGAACTGAGCTCGCACGCTGCGGCAAGGCCGTCGCGCCATCCCGGGAGCA
TCATCGCAGGGCCTCGCTCCACCCTCCGCGGCGCCGGCCCCGACCCTGAC
GAGCAGCGGCACATACAGGCCAATCCTGTGGACCCGCATGAGGACCTGGA
GAGCGCGTCGGTCCTCGCCGGCAGTGGTCAACCCCACACCTCCAACCTTC
ACGTGTTGATGTCATCCTCTGCGGAGCCTGCGCTCGAGGGCCGAGCCTCA
CAGCTAAATGGTTCTACCTCCCGCGGTGCTTTAAACGCACCCGGGGGCGC
TCAATTTCGGCTGAAGGTTGTTGGCGAGGACGGTGCTGTCAAGACGGTGA
CTGTGCCAACGGAAAATTTCGAGGCCGCCATCGAGGCCGTTGGCAAGGCG
TTAGACATGCCGACTGGCCAGCGGGCATGGACCTATGTGGACGACCAGAA
GGATGTGATCACGGTTGATACTGACGAGGGGTTTGAGGAGATGCTAGCAT
ACGCACACGGAGCACACTTATCGGTATTGAAAGTTACGATAATCAAACGC
CGGCGACCGAAAACGCGACGTAGCAGCGGGGCAAGTAGCGGTGGGAGAAG
CAGCGGCGGCAAAACCTTAACGGTCTTGGCGATGAGTAGCATTGTAGGCT
TGGCTGTTGTGGGCATTGCGATCATGGCAGGGCGCAAATATCGATGACTT
GCTCCAACCAGATTTCGATCTGATATGAAGTGACAAAGTACATGGTAGAA
TTTGAAAGCGACTGGTAGGTATTTCATGAATTTTTTTGGGTTCTTCGTGA
CAACTCCAGCACGTGAGAAACTGAGCATGAATAAGACACACATTGCATAT
GGTGGGTGGAAACACTGCATTAAGCCCACAGCCTGTATGAGGTGGTTGGA
GATATCAGAATTGTGGTGAGATATCTGCAGCAGCAACTTCGGTGGAGGAT
GCCTAAAATAAAAATCTAAAAAGAACATAAAGAACTATCAGAGAAGTGAA
GAGGGG
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protein sequence of rna6476

>rna6476-protein ID=rna6476-protein|Name=rna6476|organism=Nannochloropsis gaditana|type=polypeptide|length=273bp
MVERRAAAVLLTGKDGTLSGILTDTDVTRRVVSKELSVEGTTAEDVMTAN
PTTVTLEDDCLDALTLMVRGSFRHLPVLDSGDAVVGCLDIAKCLNDAITR
LEKMEEHREKQLGNGTNKQLEAAAMAMALAGRGGGGKHQTALVSTLMQLL
SSSGGNGEDGGSKLPSVGSMLSGASSTVLLSKEASILEASREMAASRKAC
LVVGENGELIGLVTFKDVLGRVVAKGLSPGGAILGEVMTPKPASVTPDMS
LLDALYTMRDGHFLNLPVVEETR
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mRNA from alignment at CM002468.1:594147..595020-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6476 ID=rna6476|Name=rna6476|organism=Nannochloropsis gaditana|type=mRNA|length=874bp|location=Sequence derived from alignment at CM002468.1:594147..595020- (Nannochloropsis gaditana)
ATGGTGGAGCGTCGCGCCGCAGCGGTGTTGTTGACAGGCAAGGACGGGAC
TTTGAGCGGCATCTTGACGGACACAGACGTGACCCGACGTGTGGTGTCGA
AGGAGCTGTCGGTGGAGGGGACGACGGCGGAAGACGTGATGACTGCGAAC
CCGACGACGGTGACGCTGGAGGATGATTGCTTGGACGCACTGACCTTGAT
GGTACGGGGCAGCTTCCGTCATCTTCCCGTGCTGGACTCTGGGGACGCGG
TGGTGGGATGCCTGGACATCGCCAAGTGCTTGAACGATGCTATCACTCGG
TTGGAGAAGATGGAGGAGCATCGGGAGAAACAGTTGGGCAACGGTACGAA
CAAGCAGCTGGAGGCAGCAGCGATGGCGATGGCGTTAGCAGGACGTGGGG
GCGGGGGAAAGCACCAGACGGCGCTTGTCTCGACGCTCATGCAATTGCTC
TCTTCCAGCGGCGGGAATGGAGAGGACGGTGGGAGCAAGCTGCCGAGTGT
GGGGAGTATGCTCAGCGGAGCTTCTTCTACAGTACTTCTCTCGAAAGAGG
CCAGTATTCTTGAGGCGTCGAGAGAGATGGCAGCCTCGCGTAAGGCATGC
CTGGTGGTGGGTGAGAACGGTGAGCTGATCGGGTTGGTCACCTTCAAGGA
CGTGTTGGGGCGGGTGGTGGCGAAGGGGCTGTCGCCGGGGGGGGCGATTC
TGGGCGAGGTGATGACGCCCAAGCCTGCGAGCGTGACCCCGGACATGTCA
CTGTTGGATGCGTTGTACACGATGCGGGACGGACACTTCTTGAATTTGCC
TGTGGTGGAGGAGAGTGGCCGCGCTCTGGGGCTGCTGAGCGCGATGGAGA
TCGTGCAGAGTCTGAGCTCGTTGA
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Coding sequence (CDS) from alignment at CM002468.1:594147..595020-

>rna6476 ID=rna6476|Name=rna6476|organism=Nannochloropsis gaditana|type=CDS|length=1644bp|location=Sequence derived from alignment at CM002468.1:594147..595020- (Nannochloropsis gaditana)
CTCGTTGAATGGTGGAGCGTCGCGCCGCAGCGGTGTTGTTGACAGGCAAG
GACGGGACTTTGAGCGGCATCTTGACGGACACAGACGTGACCCGACGTGT
GGTGTCGAAGGAGCTGTCGGTGGAGGGGACGACGGCGGAAGACGTGATGA
CTGCGAACCCGACGACGGTGACGCTGGAGGATGATTGCTTGGACGCACTG
ACCTTGATGGTACGGGGCAGCTTCCGTCATCTTCCCGTGCTGGACTCTGG
GGACGCGGTGGTGGGATGCCTGGACATCGCCAAGTGCTTGAACGATGCTA
TCACTCGGTTGGAGAAGATGGAGGAGCATCGGGAGAAACAGTTGGGCAAC
GGTACGAACAAGCAGCTGGAGGCAGCAGCGATGGCGATGGCGTTAGCAGG
ACGTGGGGGCGGGGGAAAGCACCAGACGGCGCTTGTCTCGACGCTCATGC
AATTGCTCTCTTCCAGCGGCGGGAATGGAGAGGACGGTGGGAGCAAGCTG
CCGAGTGTGGGGAGTATGCTCAGCGGAGCTTCTTCTACAGTACTTCTCTC
GAAAGAGGCCAGTATTCTTGAGGCGTCGAGAGAGATGGCAGCCTCGCGTA
AGGCATGCCTGGTGGTGGGTGAGAACGGTGAGCTGATCGGGTTGGTCACC
TTCAAGGACGTGTTGGGGCGGGTGGTGGCGAAGGGGCTGTCGCCGGGGGG
GGCGATTCTGGGCGAGGTGATGACGCCCAAGCCTGCGAGCGTGACCCCGG
ACATGTCACTGTTGGATGCGTTGTACACGATGCGGGACGGACACTTCTTG
AATTTGCCTGTGGTGGAGGAGACTCGTTGAATGGTGGAGCGTCGCGCCGC
AGCGGTGTTGTTGACAGGCAAGGACGGGACTTTGAGCGGCATCTTGACGG
ACACAGACGTGACCCGACGTGTGGTGTCGAAGGAGCTGTCGGTGGAGGGG
ACGACGGCGGAAGACGTGATGACTGCGAACCCGACGACGGTGACGCTGGA
GGATGATTGCTTGGACGCACTGACCTTGATGGTACGGGGCAGCTTCCGTC
ATCTTCCCGTGCTGGACTCTGGGGACGCGGTGGTGGGATGCCTGGACATC
GCCAAGTGCTTGAACGATGCTATCACTCGGTTGGAGAAGATGGAGGAGCA
TCGGGAGAAACAGTTGGGCAACGGTACGAACAAGCAGCTGGAGGCAGCAG
CGATGGCGATGGCGTTAGCAGGACGTGGGGGCGGGGGAAAGCACCAGACG
GCGCTTGTCTCGACGCTCATGCAATTGCTCTCTTCCAGCGGCGGGAATGG
AGAGGACGGTGGGAGCAAGCTGCCGAGTGTGGGGAGTATGCTCAGCGGAG
CTTCTTCTACAGTACTTCTCTCGAAAGAGGCCAGTATTCTTGAGGCGTCG
AGAGAGATGGCAGCCTCGCGTAAGGCATGCCTGGTGGTGGGTGAGAACGG
TGAGCTGATCGGGTTGGTCACCTTCAAGGACGTGTTGGGGCGGGTGGTGG
CGAAGGGGCTGTCGCCGGGGGGGGCGATTCTGGGCGAGGTGATGACGCCC
AAGCCTGCGAGCGTGACCCCGGACATGTCACTGTTGGATGCGTTGTACAC
GATGCGGGACGGACACTTCTTGAATTTGCCTGTGGTGGAGGAGA
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Synonyms
Publications