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Properties
| Property Name | Value |
|---|
| Product | ribosomal protein l35 |
| Orig transcript id | gnl|cribi|Naga_100020g43.5417.mrna |
| Orig protein id | gnl|cribi|Naga_100020g43.5417 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:508974..509567 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6435 ID=rna6435|Name=rna6435|organism=Nannochloropsis gaditana|type=mRNA|length=2155bp
CTGCACGAAGAAATGATTTCGATATCTCTCTCCCACATGGAAGCTCACGG
TAGCAAACAAATCATGCTTATCTCCAGAGTAGGTGTCCGTGCTGCCAAAA
GACGGGGGCTATACAGGGCCTAGCGCGCAGGAGGAGGCGGCGGGGTGCTC
CCAGCGCTCTCCCTCCCGTGCCAGCCCCCCTTCCCACCATGACCGAGACC
TCTCCTCTTCATACCGGGACGTCGAGCAGCACGGGGACAGGGCTATGTCT
GGTCGGGCTTGCGCCCTATTTGCAATCCAGTAACATATATGAGCGCCTGT
ACGCCAAGCAGGCGCTTCTACACGTAGATGCCAAGGTTCTGGTCAACAAC
ATGTCGACCTTGGTAACGTTATTGGATGGTTCGGGCGCCTTATCCAAGCG
CTGTGCTCTCTCTCTCCTCCAAAAGCTTTCCCCTGTTGGCCTCTTGACTG
CCCTACTCGGCCGCATCACCGTGCACCTGGACGATGAAGATGCCGACGTC
CGACGCGGAGTGGTAGCGGTGCTGGCTCACGTGCCAACGACAACCCTAGA
TTCGTACGCTGATGCCCTACTGTCCTTTGTATTCCACCCAGCCCCGTCCA
TCCGGGTGACGAGTCTGAGTGCATTGGCCTATCTCTCAGCCACCTGGACT
CAGGGGCATCTACCGGACATCTTGTCCACCGCGCTTATGGACCTGGAATC
TAGCGACGTCCGATGGGCAGCACTCGACCTGCTTCAGAAGAATGTGCACC
GATTTTTGATTGAAAAGGATTGTGAAGGCGAAGTACCGGACGGCGGAGGG
TCTAACTTCAGGCAGACGGGGACAGTTGATCCGGTTCACGGCCAAGCAGA
AACTGCGGAGATCAAGAGCACCGAGGACAATGGTAGAGATAGCATAAACA
GTTGGGTTCTCAAGAATGAGAGCATCTTGGAGAGAGGTCTTGCCGCCAGC
GATGCCTGTAACGGTGAGGATGGTGGTGTGGAGAAAATGCTTCAGGAGCA
GGCGACGAAAGCTATCCGTTGCTTTACGGATCCCGACAAATACGTTCGAT
GGAAGGCTGTGAGCGTCTTAAGCACCTATCCTTCGCATCTACTTTTGCAA
GACACGCTTGAACACTTGTTGGGGTGCCTAAACCAGCCGTTCCCCTTCGC
CCGAATCGCTGCACTCATGGCACTGTCGCGGTTAGAAGAAAAAGCGGGCC
ACAAGAAGAGGGACGACATGTCTGTGGAGAAGCACACGAGGGCTGGAGAG
AGTTTCTTGCATTTTCATGGTGAGGCTCGTGTCGTACAAGCCATGAGCAA
GCGGCTGTGGGACGAAGACTACACCGTGCGTGTGGCCTGTCTGCAGGCGC
TCAGGACCGTGCCACCGGACGTGCTGGGGGCCGCACTCATTGATGGGATG
GAAGAGGGGGATGGAGATGATTGCATCGTTGCCAAACTTGCCAGTCAGCT
GAAGGGAAGAAACTTTCCTCCTTCGGAAACAGATGGTGACGACGGGGGCC
ACTACGTGCAGCAAGCGGCAGGGCAGATACTAGAAACTTTGTACGAGGTA
TCGTCAGGAAGCTTGGTGACGGAAGATATGGTGGAAGAGGTGCACCGAAT
GCGTCTACGACAAGAAGAAGAAAGCAGAGGGTGGGATGCGAGTTGAGGCC
GACTGTCCATCATGGTCATCTTCATACGAGAAGAATAGTGCAAAGCTTAG
TGCAAAGCTAGGAGAGATGTCCTGCAAGGCCTGTCTTCCATTTAAATTTG
TGTTCAGTCAAAGTGCTCGTTATATACTTTGTCTTCTCATACATCGCCGG
TCGGCCATTGGTAGTTACTGAAGTAGTCCACGCAGCCTGCGTGGGGACTG
TGTACATGAACTGAGAATGAGGAATGATGAGGAGGCTGAAACAACGTGAG
CGGATTGCCTCACAAGAAAAATCATGCATTGCTGTTTAATGAGATTATAT
GTAGTATCCATTACAATAGCTTTTAAGCAATGTCGAAAAGTCATCATCAT
TGGAAAGGGTGTGGAATACCCTTCGGGGATGCCTCGCATATATTGTGCAT
CATTTATCGTCATGTGTATCCAGGTATTGACAGTAAGGGCCTGGAAAAAA
GAAAATATTGCATCTATTCACAAAGAATATACGATGGCAAATCAGGGTAT
TGCGG back to topprotein sequence of rna6435 >rna6435-protein ID=rna6435-protein|Name=rna6435|organism=Nannochloropsis gaditana|type=polypeptide|length=158bp
MSFSVLHWAWQKARSKVVAAVVPRLSPLHVSLQCDPSKGAVSLPTNVCVR
GKHGAKSHQGAKKRFRLLKCGEIVRGHAGKSHNTGHRSSVQMSRLRVSTT
VAPTFVRRIRRLHIPRGPLDGSSRELKSAYDEVPWISSCNFCKTSYESGC
SQVKSFFF back to topmRNA from alignment at CM002468.1:508974..509567+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6435 ID=rna6435|Name=rna6435|organism=Nannochloropsis gaditana|type=mRNA|length=594bp|location=Sequence derived from alignment at CM002468.1:508974..509567+ (Nannochloropsis gaditana)
ATGTCCTTTTCGGTGCTGCATTGGGCGTGGCAAAAGGCCAGGAGCAAAGT
GGTGGCGGCCGTCGTACCTCGCTTGTCCCCTCTTCACGTGTCTCTCCAGT
GTGATCCTTCCAAGGGCGCGGTCTCACTACCCACAAATGTTTGTGTACGC
GGGAAGCACGGAGCAAAAAGTCATCAGGGAGCCAAGAAGCGTTTCCGACT
GCTCAAATGCGGCGAGATAGTTCGAGGTCACGCCGGCAAAAGTCATAATA
CGGGGCATCGCAGCTCTGTCCAAATGTCGCGGCTCCGCGTAAGCACAACT
GTTGCCCCAACTTTCGTAAGGCGCATCCGAAGGCTAGTGTTGGGTCTTTA
AAAGAAATAATCTAAAATTAAAGTGCCTGCTCGCGACTTTACGAGCGGAT
GTGACGGTACCGGGCCTTTGCACTCGCTTCTCTCTCCGTTGAGGACATGT
CAGCATATTCCACGAGGCCCTCTGGACGGTTCTTCACGAGAGCTCAAGAG
CGCATATGATGAGGTTCCATGGATATCGTCATGCAACTTCTGTAAAACAT
CGTACGAAAGTGGGTGTTCCCAAGTCAaatccttttttttttag back to topCoding sequence (CDS) from alignment at CM002468.1:508974..509567+ >rna6435 ID=rna6435|Name=rna6435|organism=Nannochloropsis gaditana|type=CDS|length=954bp|location=Sequence derived from alignment at CM002468.1:508974..509567+ (Nannochloropsis gaditana)
ATGTCCTTTTCGGTGCTGCATTGGGCGTGGCAAAAGGCCAGGAGCAAAGT
GGTGGCGGCCGTCGTACCTCGCTTGTCCCCTCTTCACGTGTCTCTCCAGT
GTGATCCTTCCAAGGGCGCGGTCTCACTACCCACAAATGTTTGTGTACGC
GGGAAGCACGGAGCAAAAAGTCATCAGGGAGCCAAGAAGCGTTTCCGACT
GCTCAAATGCGGCGAGATAGTTCGAGGTCACGCCGGCAAAAGTCATAATA
CGGGGCATCGCAGCTCTGTCCAAATGTCGCGGCTCCGCGTAAGCACAACT
GTTGCCCCAACTTTCGTAAGGCGCATCCGAAGGCTACATATTCCACGAGG
CCCTCTGGACGGTTCTTCACGAGAGCTCAAGAGCGCATATGATGAGGTTC
CATGGATATCGTCATGCAACTTCTGTAAAACATCGTACGAAAGTGGGTGT
TCCCAAGTCAaatccttttttttttagATGTCCTTTTCGGTGCTGCATTG
GGCGTGGCAAAAGGCCAGGAGCAAAGTGGTGGCGGCCGTCGTACCTCGCT
TGTCCCCTCTTCACGTGTCTCTCCAGTGTGATCCTTCCAAGGGCGCGGTC
TCACTACCCACAAATGTTTGTGTACGCGGGAAGCACGGAGCAAAAAGTCA
TCAGGGAGCCAAGAAGCGTTTCCGACTGCTCAAATGCGGCGAGATAGTTC
GAGGTCACGCCGGCAAAAGTCATAATACGGGGCATCGCAGCTCTGTCCAA
ATGTCGCGGCTCCGCGTAAGCACAACTGTTGCCCCAACTTTCGTAAGGCG
CATCCGAAGGCTACATATTCCACGAGGCCCTCTGGACGGTTCTTCACGAG
AGCTCAAGAGCGCATATGATGAGGTTCCATGGATATCGTCATGCAACTTC
TGTAAAACATCGTACGAAAGTGGGTGTTCCCAAGTCAaatcctttttttt
ttag back to top
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