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Properties
| Property Name | Value |
|---|
| Product | myo-inositol 2-dehydrogenase |
| Orig transcript id | gnl|cribi|Naga_100020g47.5355.mrna |
| Orig protein id | gnl|cribi|Naga_100020g47.5355 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:498656..500693 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6431 ID=rna6431|Name=rna6431|organism=Nannochloropsis gaditana|type=mRNA|length=4779bp
AGGACACGCTCAGTCGCTGAGAGAGGGAACACGAACAGTAGTTATGACAA
TGAGTGCACCGCTTCCCCAATCCCGCCAAAGCCACCCCTCGCCTTTGCCC
GGTCAACATCAGCAACAAAACCCGCCCGCCTACTTTGTAGATACCAAGAA
AGGAGAAGTCAGTGAATTGAAGCAACTTCTGAAAACGCTGGCCGTGGAAA
AGGACCCGAAGCGAAAACGGGACGTGATTAAAAAAGTAATTGCCTATATG
ACGCTGGGAATTGACGTTTCACGGCTCTTCACGGAGATGGTCTTGGCAAT
AGAAACGCCAGATCTTGTTGTTAAGAAAATGGTCTACCTCTACCTGTGCA
ATTACGCCCATGCAAAACCTGATCTTGCCCTTATGTGTGTCAACACATTA
CAGCGAGACTGTTCTGCGGACGACCCCATGGTTCGAGGCCTGGCTCTGCG
GGCCCTCTGCTCGCTACGACTGCCGTCCATGCTGGAATACATCTCCGCCC
CTCTGCGGCGGGCATTGACCGACCAAAGCCCGTACGTGCGCAAGACCGGA
GTGATGGGTATCCTGAAGCTCTTTCATCTTGCGCCTGACGTAGCCCGTTC
CGCAAACTTCGTGGATCTGCTGTACAACATGATCCAGGACCCGGACCCGC
ACGTGGTCACCAATTGCCTGATAGTGCTGGGGGAGATGCTGGCTGCGGAG
GAGGGCGGCATGGCGGTCAACCAGCCCCTGATTCTGCACCTTCTCGGTCG
GCTTGGGGAGTTCAACGAATGGGGTCTGACGCAAATTCTGGCGCTGGTGG
CGAAGTACCATCCTGCTGACGAGGAGGAGCTCTTCACCATCATGAACTTG
CTAGACCCCGTGCTGCGGACCTCAAACAGCGGGGTGGTTCTCAGCACGAT
CAAGTGTTTCTTGCACCTAACTACAGCAGTACCTGATCTTCAACCGCAGG
TGTACTTGCGAGTCAAGGCGCCTTTACTCACGCTCATGGCCGGAGGGAAC
CCGGAGGTGGAATATTGCATTTTAAAGCACTTGGAGGCGATGGTGCATCG
CGCCCCTGGTGTTTTTGATGACGAATATAGACAGCTCTATGTACGGTATA
ATGAACCTACTTTCGTGAAGTACGAAAAAATCGATATTTTGGCCATCATC
GCTAACGAAGAAACGGTCGGTGACATTGTCGCAGAGCTGGCCGAGTATTC
AACAGACGTGGACCAAGAGGTGTCGCGACGGTCGATTCGCGCCATCGGAA
ACATTGCCTTTCGCTTGCCCAGCGCGGCAGGCATGGTTCTGGAGCGCTTG
GTAGGCTTTTTGGACGTGGACATGAACAGCATGCGGCCTGAGACAATCTT
GGTAATGAGGGACATTCTTCGACGCTATCCCGAGCGGAAGGCAGAGGCGC
TACCCCGCCTCCAGCCTTGCATGCGCCGCGTTGATAATCACCCAGAAGCT
CAAGCTGCGCTAATCTGGATGACTGGCGAGTACGGTGGAAAGAATTTTCC
GGAGGGTCCGTACCTTTTGGAGCCGTTAATTGATAGCTACGCTACCATTT
CGTCGGCATTGGTCAAATTGAGCTTGTTGACTGCCGCAATGAAACTTTTT
TTTAAGCGTCCTCCGGAAATGCAAAGCATGCTAGGTCGCCTCCTGGCAGC
TGCGACCAATGATTTGACGTCTCAGGACGTCCACGACCGGGCTCTACTGT
ATTACCGTCTCCTAGTGGCAGACGTAGAGGCGGCCAAGCGTGTGGTTCTA
GGCGAGCACGAAATGGATGTCAACCGTACAACGATCGTAGGCACTTTCGC
GGAGGAGCGAGATATGACCAGCTTGCGTGACAAGCTTTTCGGTGAGTTTA
ATACATTGGCTGTCATATACGGAAAACCTTCTTCTCAATTCGTCAGCCCT
TCGTATCGGATTAAGCCTGCAGAAACCAGCCTGACGCCTTTCATGATGGG
TGTCCAAATTGGTGACAGCGGTAATAATGGAAACAATCTCTTGGACCTGC
ATGCTGATGACAGCTTGTTGCCTGGGGGCGGCGTAGAGTGCGGCGTTGAA
AGCGAGTCGCCCTCACGCGCAGGCAGTACAAATCCTGAAGGTAGCACCGC
CTATACAGGTCCCTCCTCTGATCTCCTCGACATGAGCGACATGGGTGTTT
CTCTCGCGGTACCAACAGATCGTATAACAACGCCGAGTGCATCGCAACAG
GATTTTTGTACATCTACCCTAGCGCTCATTGACTCATTTCGAATGGAGCC
GGAGACCTTTCAACACTTGTGGGCAGAACTTCCTGAAAGTATATCTTACA
ATGTAGACTTGACAGTTCTTCCTACGGACGGGCTATCAACACTAGAGACA
TCACTTTTATCGCGGGGTATAAAATGCTTGGCAAGCGGGGAGGTGACTGA
TGTATTCAAACTTTTCCTGTACGGGCAACATGAATTGGGGCGTTTGTATT
TGATTCAAATCGTAATACATAAGTTGTCGAAACGATTGAATCTTACGCTC
AAAATTGGTAGGCCTGAAATGGAGTCGGAAGGGGATGACGGAAAAGACAG
GTCGGCGAACGCTGTGGTCGAATTGATTACCCAGGTGTTGTCCTCCCTGC
ACCTATTGTGATGAAGCAAAGGAGTTCTGCTCGACGCCTTATTTCGTAGC
TTAAGTAATCAATGGACAGGAATGGCCATATAGTATACTCGACGCATGTT
TTCCACCAGCCGTTCACGATAGATCACAGTCAATACAATCGTCACATACT
TGTCTAATTTCTTTAATTAGATTTCCGATTCTTATGGCATTGAAGGCGAT
ACAGAAGGGCTTTCATGCGAATGATATGAATCTAATTCACCGTCTTCTTG
CCGCATCAGTGCATCCTTGGTGATTTTCCACACCTTGCGACTCAGAAGCA
TCGGACTGTGAGCCAAACTCGCCATGAGATGTTCTTCTTCCAAATCGTGT
CGCGTCAGGATGCCGGATAGATGCCCATTCCGACTTATTACCAATAAATG
TCGTAATCCTAAATTGCGAAAAAGACGATAGGCGCGGGGGACGGCGGTGG
ACTCAGTCACGAGGTATGGTGCTGTGTCGCAGTATGGTCGCAGATCGATC
CATGAAAATTTTTCGCTTTCCGTCAAACATATGGTAGCAATGCTTGGAAA
ATGGGGGAAGAACTGTTCTACCTTTTCGTAGGGCAAGACAGGTGTAACCA
CGGCAGCACTCGTATCGCGCAATACAGATTCTGATTTTTCACCGCTGAAG
GCTTTCAAAAATAGAAGTGAACAAAGTATGTCACGAGAAATAGTTCCAAA
TACTGTACAATCATCTTCACGAAGTGGAAAGCAGTGATGCGCAGTTGCGG
CGAGCAGCTCGTAAATCCTCCCAACTTGGTCAACAGGATGCAAGCACAAA
GGCTCTGTTGCCATGATCTCACACACCCGCAGATCACTAACACGGGCTTC
TTGTGGACATTGGGGCTCCAAAAATGGAATTTTACGGAGGTGGATATGCA
TATGGTAGATACTTTCGTTGAATGCATTTCCGACCCATCTTGACAAAAAT
AGGCTTATGCTGAGCGGAAGAAGCAAATTCATATTTCCTGTCGCCTCTAA
CAGAATCAAAGCCAGCGAAATAGTCATGCGACACATACCACCTAACACAG
CAGAAGCCATCACCAATGCGTAAACACCTGGTTCAGCAAAACCTCCCAAA
GGATGAAGGGCTTGACCAACGACGCGTCCCAATGCAGCTCCTGACAATAA
AGAGGGAATGAAAAGGCCAAAGGGCACGGAAGCTCCAAAAGTCATGAATG
CCATGAAAAAGTATGGACAGAAGAAACACAATAATGCCGCAGTCGAGAAA
ACCGGCTCCCCACTTTGAAGATGCATCGGTAGGTGAAAAAGTATTCGAAG
CGAGTCGTCCCACGACTGTAAATATAAGGAAGCGAGTTCGTTGTAGCTGT
CATCTCCCGCACACAAAAATGGTCGCAAGGTACTGGCGTAACTATAAATT
CCAGTAGTTGTGTCGAGCTGGGGACGCGAGCGGCACCGGCCGGCAAACGG
GAGGCCGAAAGACAGAACAGCCATCAAAGTCGTCAGGCTCATGAGCTCCA
GCATTTTCTTACGAGGTGTGGTAACATGAGCCAAGCGAAAGACAGTCAGG
CGCCGATTCATTTGATTGAAAGCAGCCCCTAGGAGTCCTCCTAGTACTCC
CATGACCGCAAAAATCGACAAATCTTTTTGCTCGTATAATGGGCCTGAAT
TAGGAAACGGATCCAGAAACGATAGCTGATTCACAAATTCTGGAGGCAAG
ACGCTAAGTAGAAGATATCCAGTTAGCGCAGTTCCTATTGCACAGAAGAA
GCATCGCCATGTCAATTTCAGTGTCATGAAGGATGCGCCTTCTTCCAATG
CGAAAAATACACCTCCAATCGGTGCTCCAAACGCCGCAGCAACACCCCCC
GCTGTTGCGCACGCGACAAAATCTCTTCGTTCCTTATCGTTACGGAAATC
TTCAAAAGAAAGTCGACGCTCAAGGCCCCAAATTTTGCCTTGCGAAAACA
AAGAACCTAAAATCGCGCAACAAGAGACAATGGGACCTTCGAATCCCAAA
GGCAATCCTGAAGCTTGCGCAAATATTACCCCAACAGCCTTGCCATATAA
AGTGTTGAAGTGCATTACGTGAGGAAGATTCACGCCATTTAAGTAACTCT
TTACCTCTGCCATCCCTGAACCTCCTACAGCTGGCTGCAAAAGCGTCACG
ACCCCAGCAACCACCGCAAATAGCAGAGA back to topprotein sequence of rna6431 >rna6431-protein ID=rna6431-protein|Name=rna6431|organism=Nannochloropsis gaditana|type=polypeptide|length=334bp
MPGEVLRVGVIGVGRIGRVHIETIQSIKNAVVTMVADIWEEGARQVCEQY
GIPKYVKDYKDLIAAADVDAVLICSPTDQHASQIIEASRAGKTIFCEKPI
SLNLEIIDEVCNVVEETGALCMVAFQRRFDPTFRRLQAAVTKGEIGDVHM
IAITSRDPGPPPVAYIAQSGGLHCDMAIHDFDMARFITGSDIVEVFTKGD
CKIDPAIAEAGDIDTSLVVLKFANGVIGTISNSRKATYGYDQRVEVFGSK
GMIQSENLRPNMCTLATAESVHQDLPFNFFMDRYTEAYKVEMEEFVKCAL
AGSKPPCGVAEGRAATKVAMAAAASMKSNAPVAL back to topmRNA from alignment at CM002468.1:498656..500693+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6431 ID=rna6431|Name=rna6431|organism=Nannochloropsis gaditana|type=mRNA|length=2038bp|location=Sequence derived from alignment at CM002468.1:498656..500693+ (Nannochloropsis gaditana)
GCAGCACAAGCTTACGGTGACAGGCTACTTCCACGAATCACAATCGTGTC
AGACCCCACGAAATGTGCCAGCACGCGGGAAGGCtggcaagcaggaggag
gcctgctcctcgcgccctccctcacgagGCCTCAGCTCCGCCGGCCCCCC
GTGGGGTGAATTAGGAGAGGGTATTCCAACGCTCAAATGCCCGCTGTTCC
GGCCACGGCACAGGAAATATAGCCCACCGTTTGTGGAAGCTGCAGGAGCA
TATCTTGCCGGTATGTAGAACCATCGGTCTTTGCATTAATTAACGGAGAT
GTAGCTGGTCTTATCCGTGAAGCGGGTTCGAGATCGTATCCTTTGCACCG
CCTACCATGTCTTGCTGTTTTCCTGTGAATAGAGCGAACGTCCTTACCAA
ATTGTCCGCGCACTGATTGAACTACTCTTTCTTATCCAATACAACAGTCG
AAACCAAAGGAAATCATGCCGGGAGAGGTACGTGGATATGAATGGGGATG
GTTTGGGGTTTTTTCTGCACCGAACAAGAAAACTTCGAATGATGAATCTT
TGTTTGCCATCATGTACCCGGGTCTCGGAGACATGGGAAAAGCAATACGA
CGTTTCGTGTTAGTGAGCCTGAGTGGTTGGCCTGGTGCGTTGGTACTAAG
GTTTCACTGATTTGTGACTTGTCATCCTGTTGCCTCATCCTAGGTCCTTC
GGGTCGGTGTGATTGGAGTGGGGCGAATCGGTCGCGTTCACATCGAGACG
ATCCAATCCATCAAGAATGCTGTAGTTACTATGGTTGCCGATatttggga
ggaaggggcgaggcAAGTCTGCGAGCAGTACGGCATCCCCAAGTACGTGA
AGGATTACAAGGATCTCATCGCCGCCGCGGATGTAGACGCCGTACTCATT
TGCTCGCCTACGGATCAGCACGCTTCTCAAATTATCGAAGCATCGCGTGC
GGGCAAAACAATCTTCTGTGAAAAGCCCATTTCTTTAAATTTGGAGATCA
TTGATGAGGTGTGCAACGTTGTTGAAGAGACGGGTGCTCTGTGTATGGTA
GCATTTCAGCGCCGTTTTGATCCCACCTTTCGCCGTCTGCAAGCTGCGGT
GACAAAGGGTGAAATTGGTGACGTCCACATGATCGCCATCACCTCGCGAG
ACCCGGGCCCGCCGCCGGTCGCCTATATTGCCCAGTCGGGAGGCTTGCAC
TGCGACATGGCCATCCACGATTTCGACATGGCACGCTTCATCACTGGGTC
CGATATAGTCGAGGTCTTCACCAAGGGCGACTGTAAGATAGACCCGGCAA
TTGCGGAGGCTGGCGACATCGATACCTCGCTGGTAGTGCTCAAGTTTGCA
AATGGCGTCATCGGCACTATTTCGAATTCCCGGAAGGCCACCTACGGCTA
CGACCAGCGCGTGGAAGTGTTCGGCTCGAAGGGCATGATTCAGTCTGAAA
ACCTGCGCCCTAATATGTGCACGCTGGCCACGGCAGAGTCCGTGCACCAG
GACCTGCCTTTCAATTTCTTCATGGACCGCTACACCGAGGCCTAcaaggt
ggagatggaggagttcGTCAAATGCGCACTTGCCGGCTCAAAACCCCCTT
GCGGTGTCGCAGAGGGGCGTGCCGCCACGAAGGTAGCGATGGCTGCCGCG
GCCTCCATGAAGTCGAACGCCCCTGTTGCGCTCTAAGGCATCGACGCAGA
GATGCGTGTTGGATGCCGCCGACctcatctctccctttgCGCATGATTAC
AGCCAGGATCGCTAGTCTTGGGTATAGGTCGCGGGGAATATAtgaagcaa
agaaaaggtTATACGAGTAACGCACGATCAAGGCAATCAGTCGCACGGTT
GTCTTCACACTCGTTGGGTTTGTTACgaaagcggaggcggaaTGGGGTGG
GGAGTGTGCTTGAGAATCGTTAACTTTGGATGAAGAGGTTTTGAGCCCGA
CCCGAATGTCTGGAAGCGAACTACGAAACGAATAAGCTTCTCGCATAAAA
CGGACAAATTTTATTTTTCAGCAGTGCTTTTTGTAAAA back to topCoding sequence (CDS) from alignment at CM002468.1:498656..500693+ >rna6431 ID=rna6431|Name=rna6431|organism=Nannochloropsis gaditana|type=CDS|length=2010bp|location=Sequence derived from alignment at CM002468.1:498656..500693+ (Nannochloropsis gaditana)
ATGCCGGGAGAGGTCCTTCGGGTCGGTGTGATTGGAGTGGGGCGAATCGG
TCGCGTTCACATCGAGACGATCCAATCCATCAAGAATGCTGTAGTTACTA
TGGTTGCCGATatttgggaggaaggggcgaggcAAGTCTGCGAGCAGTAC
GGCATCCCCAAGTACGTGAAGGATTACAAGGATCTCATCGCCGCCGCGGA
TGTAGACGCCGTACTCATTTGCTCGCCTACGGATCAGCACGCTTCTCAAA
TTATCGAAGCATCGCGTGCGGGCAAAACAATCTTCTGTGAAAAGCCCATT
TCTTTAAATTTGGAGATCATTGATGAGGTGTGCAACGTTGTTGAAGAGAC
GGGTGCTCTGTGTATGGTAGCATTTCAGCGCCGTTTTGATCCCACCTTTC
GCCGTCTGCAAGCTGCGGTGACAAAGGGTGAAATTGGTGACGTCCACATG
ATCGCCATCACCTCGCGAGACCCGGGCCCGCCGCCGGTCGCCTATATTGC
CCAGTCGGGAGGCTTGCACTGCGACATGGCCATCCACGATTTCGACATGG
CACGCTTCATCACTGGGTCCGATATAGTCGAGGTCTTCACCAAGGGCGAC
TGTAAGATAGACCCGGCAATTGCGGAGGCTGGCGACATCGATACCTCGCT
GGTAGTGCTCAAGTTTGCAAATGGCGTCATCGGCACTATTTCGAATTCCC
GGAAGGCCACCTACGGCTACGACCAGCGCGTGGAAGTGTTCGGCTCGAAG
GGCATGATTCAGTCTGAAAACCTGCGCCCTAATATGTGCACGCTGGCCAC
GGCAGAGTCCGTGCACCAGGACCTGCCTTTCAATTTCTTCATGGACCGCT
ACACCGAGGCCTAcaaggtggagatggaggagttcGTCAAATGCGCACTT
GCCGGCTCAAAACCCCCTTGCGGTGTCGCAGAGGGGCGTGCCGCCACGAA
GGTAGCGATGGCTGCCGCGGCCTCCATGAAGTCGAACGCCCCTGTTGCGC
TCTAAATGCCGGGAGAGGTCCTTCGGGTCGGTGTGATTGGAGTGGGGCGA
ATCGGTCGCGTTCACATCGAGACGATCCAATCCATCAAGAATGCTGTAGT
TACTATGGTTGCCGATatttgggaggaaggggcgaggcAAGTCTGCGAGC
AGTACGGCATCCCCAAGTACGTGAAGGATTACAAGGATCTCATCGCCGCC
GCGGATGTAGACGCCGTACTCATTTGCTCGCCTACGGATCAGCACGCTTC
TCAAATTATCGAAGCATCGCGTGCGGGCAAAACAATCTTCTGTGAAAAGC
CCATTTCTTTAAATTTGGAGATCATTGATGAGGTGTGCAACGTTGTTGAA
GAGACGGGTGCTCTGTGTATGGTAGCATTTCAGCGCCGTTTTGATCCCAC
CTTTCGCCGTCTGCAAGCTGCGGTGACAAAGGGTGAAATTGGTGACGTCC
ACATGATCGCCATCACCTCGCGAGACCCGGGCCCGCCGCCGGTCGCCTAT
ATTGCCCAGTCGGGAGGCTTGCACTGCGACATGGCCATCCACGATTTCGA
CATGGCACGCTTCATCACTGGGTCCGATATAGTCGAGGTCTTCACCAAGG
GCGACTGTAAGATAGACCCGGCAATTGCGGAGGCTGGCGACATCGATACC
TCGCTGGTAGTGCTCAAGTTTGCAAATGGCGTCATCGGCACTATTTCGAA
TTCCCGGAAGGCCACCTACGGCTACGACCAGCGCGTGGAAGTGTTCGGCT
CGAAGGGCATGATTCAGTCTGAAAACCTGCGCCCTAATATGTGCACGCTG
GCCACGGCAGAGTCCGTGCACCAGGACCTGCCTTTCAATTTCTTCATGGA
CCGCTACACCGAGGCCTAcaaggtggagatggaggagttcGTCAAATGCG
CACTTGCCGGCTCAAAACCCCCTTGCGGTGTCGCAGAGGGGCGTGCCGCC
ACGAAGGTAGCGATGGCTGCCGCGGCCTCCATGAAGTCGAACGCCCCTGT
TGCGCTCTAA back to top
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