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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100047g41.6060.mrna |
| Orig protein id | gnl|cribi|Naga_100047g41.6060 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:419333..420462 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6396 ID=rna6396|Name=rna6396|organism=Nannochloropsis gaditana|type=mRNA|length=5062bp
TAGACCCACGTTTTAACATAACCTCTCGATCCGTTTCGCGAGTCTCCGCT
CCGCCGCTGCAACTTGAAGTTGCCTTTCCTAAATACATACCGCTGAGACG
CGCGACAATTTAGCTCTTCTTGTACGCAGAGGCCGAGCCTGCTGAGCCTA
CTGATATATATATATATATATATAACTATATAGTCAGACGTCAGACGCAC
GTCAGTCCTGTCAATGTTTAAGTTTTCTTGCTTGATTCGCTTTTGCATTG
CGAGCCTTGAGACATCGGAACTATTTTACAAGAATAGATTGGCTTTATTT
GATGGTGGTCTCCGCAATTGTTTTTCAATGAGGGAAACGCTTGCGTTATG
GAACCGTCTTACTGGGGATATCTCGCATTTTGGATATCTCGCAAAGAAAT
AATGGCAATACTACTAGTACTCATGGGTAATTAAGGAAGACAGGAGGTTA
CATTCTGAATTTCTTTCGGGTGCGGGATCAAGGCCGCTGGCAGCTCTGCA
TAAGTGGTGTGGATCATTTTGCATGACGTGCCCGTAGCCAGGTGCAACAC
TCACACGAACACGACGAACCTTCTTCCAGGCGCATTTTCCGCCTCAACGA
ACACGAAAAATTATGTTGCACTTATAAGCTGGGTTGACAGAACAAAGTAC
AAGACATGTGGCATATCGAAAATTGATTTCGTACATTTCTCAAAAATACA
TGTTATCCCCGCTTTCTGATCTTGACTCCGCAAATCAACCTTTCATGGCA
CCCGTTCGAGCAAATGGCACTTTTTTGGCGTTTGACGCTTCTGTCAAGCC
TCCTCTTGATCCGGAAACATACGGCGTCTCGTCTCCGACAGTGGCAGCAT
GAACAAGCAAGTGACTCTACAAACACAGCGACCACGGGCACACTGACTTG
GAGAGCTAACACCACCAACTCCGTGCTTCCTGAAGAATGTAGTGCGGTCT
CGGAGGAATGTATGGATCAGCTTATCTCTGTGGCAGATGATGCACACAAT
GCAAACGTATCTGATGTGGGGAGTCTATACAATTTTTGTGGAACTGAATG
TGGTAAAAACTATACAGGCCATGTGACGGCGATTCTCCAGGGGAAATGCA
TGAGTATCCTCCCTCCTCGGTCCAACGGGTCTCTCGATTCAAACATCGAC
GGAGTGGAGCGCACAAGGCCTGCCGCGGTGGTCGTCATTAACGTCACTCG
GCACTCAAATGATGACAGGAGAATCCCTGTCAGTCCTGAGCACAGCAATG
TATACGCTGAAATGCGGAGTTGACCGATGAAAACGGAGATGACGGTGACA
ATGACAATGAAGATGACGACGACGATGATGACCACCTGAGAGATGGGGAC
GCGAGGGTACATATTAGCAATGTTGTGTCAGTGAACGATTCCCTGGTGAC
ATCGTCGGTACAAAAACGTGTGGATTTATTTCGGAAAGATCGTTTTGGCA
CTGTTCTGGGTTGTGTAAAAGCCGCTGACGGGGAGATGTGTTCGGCTAAA
CAAGGTTGTGACTTTTTCAATTCATGCTGCTACTCTTCTTGGTCTCGACT
GGGCGACTTTGCCGGCTACCCGTTGACATGTCGTAGCGTTCGAGCAATAG
AGTATATGTGTCCTGGGATCATACGGTTTTTAGGAACTGATGGGTGCACG
TAGTTTTGTATCACAGGCGCTATGTTGACTTAAATTAGTGCTTGAGGATA
TACCACCATCATCCCTTCGCGTAAAGACCCCGGACGGGAACCTTTCAATA
CGTTTTAAAACTCGAAAGAAAAGCAGAGAGATGCGAAGAAAGATACAAAA
TACTGGAAAGCATAACATTAATTTGTTAGAGTCACTACCCAACCACGTTC
GGGCACGTAAGAAAAATCAGCGAGGAGAGCGCCGGACACCAGCTAATAGC
CTGTAGGCAACAGCTCCCACAAATTAAAAGAAGTATACCTTCACTCAAAG
CTTATATACGTCGGGAGCGGTGTGCGTATCTACCCTTAAACATTTTTTTA
AAGGGATCAGCTTTTGATTAAGGGCAGCGAAGGTTGCGCTGTTGCAGTCT
CTCGTCTCGTCGTTGAGATCATGTCTTTTCCCTTACTTGCCGCACAAGTA
GTATGAATGGTCCTCTCACCCGCTTTTCGTTTCCGGATGCAATCCCCGTT
GTGGTACCATGCAAGGTTTCCTGGGACTTTAGAGGACAACGCCGTCATCG
GATTTTCTCCCGGATCCTCAAAGTGGCGTTCATAAAGCGGTTCGCCGTAT
CAGGGGCTGTGAGGACTGTCATCACGAGCACCCACGTTGGCAGCGGGAGG
AGGCGCCCCCCCAAGGAGGAGGAGGAACAGAAAGGAGCGGAACGCAGCGT
ACGTCCACGACGCGGAGACAACTCAACATCTGTGAGAAGCGCATCACATC
GACCTGGAGCCATGACACAAAGTTTTGATCCCGAGACTGAAGCACAGCGG
CAGGAAGATCAGCATTTGCGAGGTATGCGACACGCCCATCACCCGCAGGG
GAGATCACGCATGGACGAAGGAGTGGAAGCCCGTAATACCGCCTTTACTA
GATCACGGCTAGGTGATGAGCATGGTGGCCGACATGACAACGCGGAGGAT
GTGGGGGCTTTCGGAGAGGAGCTTGATCCGATGCTGGACTCAATCACCGA
CACGCGAGCGTCAGGCGTTGCGCACACTGCAAGGAATCTAGATGGCTACA
GTGCGGCGACCAGCATCACAAACCGCGTGAGCGAAGTCTCAGACCTTCAC
AGCCGGCGTCCATCGTCCCTGCGGACGTCCATACAGCCTTCCTGTCCCAC
GCCCGGCCTCAACGAAAATGACAACGAAAGCATGGGAAAAAACGCGAATG
ACGCGGCTGGCTCAGAGGCGCTGGGCCCTTCTGTCAGTCTTTCTCCCTGT
CGCACAAGCTGGCCCGTGTCTGGGGACGGCGCAACGCCTTATTTCGAGGG
CATGCTGCTCGAGGCTCTAGACAGTGTCGACGTCTGGTGCGAGGCGGAAG
TCATCGGGGTCAACACCGCCTCCCGCCACGTGCGCGTGACGTATCTATAT
TGGAGCGATAAGTACGACGAGGACATCCCTCTCTTCTCCACCCGGCTGGC
TCCGTATCCCACCCACACCTTTCAACCCGGGCGGCCCGAGACCTTGCAGG
TGCGACAGCGCGTCGAAGTCGAAGTCGAGGGCGCGGACCAGGCGAGAAAA
TGGGTACATGCTGAGGTGAAAGGTGTGTCTGGGGATGGCAGGCAAGTCCT
CGTGGCCTGTAAAGGTCGGGGCCGGCTCGAGGAGTGGCTGCCCCGAGACA
GTGCCCGTATCCGGGCCTACGGGAGGTTCAAGAAGTGCCTGGCCGCTAAG
CAGAGCCGGTACGGGAAAGCCGCCCTTGCCGCTACCACAGGGAGTCATGT
TGTCAACGGCGAGGTCCACGCCGGGTTGAAGCGCCCCCCTCTAAGACTTG
TCGGGGGGTCGAACCAGCATTACCCGCAGCCGCCTCAGTCGCGGAGCCAA
ACGCGGGTGGATCTGAATGATCTGCACCGTCGCGCCATCGCCGCCAGCAG
TGACAGGTACAGCGCCTATCAAGCCGCTCTAAGCCGACACGGACTCTCGA
TTCAGCCCATCGAGGGGGATGGAAACTGCCTCTTTCGGTCGGTCTCGCAC
CAGGTATACGGCACGGACGCACACCACATGTTGATCCGCGACAAGTGCAT
GGCCTACATGGATCTGGAGCGCCAGTATTTCGAGCCGTACGTAGTGGGAG
GAATGAGTGAGTTCTTGCGGTACCTGGAACTGAAGCGTCGCGACGGAGTT
TGGGGGGACGACCCGGAGGTGCAGGCCCTCTGTGAGATGTACGATCGGCC
TGCAGAGATCTGGGCCTTCGACGCCGCGGAGGGTGCGAAGAAGCTCAGGA
CTTTCCACGAGGCGAGCGGGTTCACCGGGCGCTCGATGGCGCCGGGCGGC
AGTGCACCGATGCGGTTGAGCTATTACGGGGGAGGACACTACGACTCGTT
GGTGCGGGTAGGGGGTCGGGATGGCGGTGAGGCGGGGGGAGGAGAGGTTC
CAGGAATGGTTGAAAATCGGGCGCTTGAGATGGCACAACAGCGACAGGCA
GCTTCTACAGGTAGGGGGGCGTTTGGAATGGAGGAGTCGAAGCAGAGGTC
CGACCAGGAAGCGACGGAGGAAGCTGCCGTTGAAGCCGCCTTGAAGGCGT
CGAGGGAGGACTTCGATTCCTTCACGGACCTGGAAACCGCACTGGAGTTA
TCGGCAGAGGCGCATTTACAAGCGGAACTGATGCGGTCGGCCGTGGCATC
AACAGAGGAGGAATTGGTGAAAAAAGTATTGGAGGACAGTTTGAAGGGAT
CAGACGGGGAGCAGGGACCAAGCACGGAAGAGGAGATGGTGCGAGTCGCG
ATGAAGGAATCACTGGCCGAGGGAGGGTTGGCAAGGGACGAGGGCGCGGC
AGCAGAAGCGGCGACAATGGTAGATCACGAGTACCAGGAGGCTTTGACCC
TAAGCATGTCTGGGGTGGGGGCGGATGCCGGGCGACAGGGCGAGGCCGTG
GATTTTGGTGAGCTGGTAGAGGACGGGGAGCTGGCCCGAGCAATTGCTCT
CTCATTGAAGCACATACAGGGCCAAGATCAATCTCTTCAGGAGGATAATT
ATAGTGTTGAAGAAGACCACGGCGCCTCATTTTTGTCGATGTCGCCTGCT
CCCGCCAGTTCGTCACCGCCCGTAGCTGCTGATTCTTTCGGGAGTGGCGC
CAGCCTGGAAGATGCATACCTTCGAGAGCAACACGAAAATCTTGAACAAG
CTCGCGCGCGAAAAGAAGAGGCTGACCTTCAACGGGCTGTGGAAGCTTCC
TTAGGACAACAACATTGTAGTGATGGAAGGGGACCTGATAATTGAGCTCG
AAAGAAGACCACCCCCTAGTAATGATATTGACAATTTATGATCACTATCT
GAGGACGACAAATGTACATACTATGAGTAGAATGTGTACGAAGTATGTAA
AAAGGGACCAAAAAGAAGTATTTTCCAAGAGCATATCACAATTGGCCGTT
CGACTATTTTTT back to topprotein sequence of rna6396 >rna6396-protein ID=rna6396-protein|Name=rna6396|organism=Nannochloropsis gaditana|type=polypeptide|length=100bp
MYPRVPISQVVIIVVVIFIVIVTVISVFIGQLRISAYTLLCSGLTGILLS
SFECRVTLMTTTAAGLVRSTPSMFESRDPLDRGGRILMHFPWRIAVTWPV back to topmRNA from alignment at CM002468.1:419333..420462- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna6396 ID=rna6396|Name=rna6396|organism=Nannochloropsis gaditana|type=mRNA|length=1130bp|location=Sequence derived from alignment at CM002468.1:419333..420462- (Nannochloropsis gaditana)
GAACACATCTCCCCGTCAGCGGCTTTTACACAACCCAGAACAGTGCCAAA
ACGATCTTTCCGAAATAAATCCACACGTTTTTGTACCGACGATGTCACCA
GGGAATCGTTCACTGACACAACATTGCTAATATGTACCCTCGCGTCCCCA
TCTCTCAGGTGGTCATCATCGTCGTCGTCATCTTCATTGTCATTGTCACC
GTCATCTCCGTTTTCATCGGTCAACTCCGCATTTCAGCGTATACATTGCT
GTGCTCAGGACTGACAGGGATTCTCCTGTCATCATTTGAGTGCCGAGTGA
CGTTAATGACGACCACCGCGGCAGGCCTTGTGCGCTCCACTCCGTCGATG
TTTGAATCGAGAGACCCGTTGGACCGAGGAGGGAGGATACTCATGCATTT
CCCCTGGAGAATCGCCGTCACATGGCCTGTATAGCTATGAAAGTACGCAT
TTGAGCAGTCTAAACTGCTTTGTTTAATACCTACCGTTCAAATCTTGTGC
CAATCAAACTTACTTTTTACCACATTCAGTTCCACAAAAATTGTATAGAC
TCCCCACATCAGATACGTTTGCATTGTGTGCATCATCTGCCACAGAGATA
AGCTGATCCATACATTCCTCCGAGACCGCACTACATTCTTCAGGAAGCAC
GGAGTTGGTGGTGTTAGCTCTCCAAGTCAGTGTGCCCGTGGTCGCTGTGT
TTGTAGAGTCACTTGCTTGTTCATGCTGCCACTGTCGGAGACGAGACGCC
GTATGTTTCCGGATCAAGAGGAGGCTTGACAGAAGCGTCAAACGCCAAAA
AAGTGCCATTTGCTCGAACGGGTGCCATGAAAGGTTGATTTGCGGAGTCA
AGATCAGAAAGCGGGGATAACATGTATTTTTGAGAAATGTACGAAATCAA
TTTTCGATATGCCACATGTCTTGTACTTTGTTCTGTCAACCCAGCTTATA
AGTGCAACATAATTTTTCGTGTTCGTTGAGGCGGAAAATGCGCCTGGAAG
AAGGTTCGTCGTGTTCGTGTGAGTGTTGCACCTGGCTACGGGCACGTCAT
GCAAAATGATCCACACCACTTATGCAGAGCTGCCAGCGGCCTTGATCCCG
CACCCGAAAGAAATTCAGAATGTAACCTCC back to topCoding sequence (CDS) from alignment at CM002468.1:419333..420462- >rna6396 ID=rna6396|Name=rna6396|organism=Nannochloropsis gaditana|type=CDS|length=303bp|location=Sequence derived from alignment at CM002468.1:419333..420462- (Nannochloropsis gaditana)
ATGTACCCTCGCGTCCCCATCTCTCAGGTGGTCATCATCGTCGTCGTCAT
CTTCATTGTCATTGTCACCGTCATCTCCGTTTTCATCGGTCAACTCCGCA
TTTCAGCGTATACATTGCTGTGCTCAGGACTGACAGGGATTCTCCTGTCA
TCATTTGAGTGCCGAGTGACGTTAATGACGACCACCGCGGCAGGCCTTGT
GCGCTCCACTCCGTCGATGTTTGAATCGAGAGACCCGTTGGACCGAGGAG
GGAGGATACTCATGCATTTCCCCTGGAGAATCGCCGTCACATGGCCTGTA
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