Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100047g39.6089.mrna |
| Orig protein id | gnl|cribi|Naga_100047g39.6089 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:417652..418340 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6394 ID=rna6394|Name=rna6394|organism=Nannochloropsis gaditana|type=mRNA|length=2433bp
TCTCTCCTCGATGAGTCCATAAAGATAATCTTCCCTAACTTGAGCAGGCC
CAGGTATTGGCAGCAGTCTTATCGTGCGTCATGCCTCAGAAAAACAGATG
CGGCCCCCTGCTTTTAATGGGCCGTCCGGTCCGAGTGAGCGGTAGCCAAA
TCCTCGCCGTGCCGTCTCCCAGAGAGCTAGCGCCACCATCGACCACACCA
CCCGTCAAGTGAAATATTTGCAAGCGTCTGCAACGATGTTATGCTCGGTG
TTAGCCACTAATTCTTTTCTGTGCCCACTTTTGTGGATTTCATCTTTTGA
GGGACGATCACTCGACATGTCATGTCAGTACCTTTGTACCATCAGTAGTT
ATTGCACTGGTTTTCCATATTAGGTGATATTCGACAATGGCCAGCAAGGA
GGAAATTGAAGCGCTCATCAAGGCAAAAGGGGACGAAATCCGGCAGCTCA
AAGCTGAAAAATCGGAAAAGGATACAATTCTGGCTCAGGTTGCGCTCTTA
AATGAGCTGAAGGCGAAGTACAAAGAGACAACAGGCGAAGACTTTGGGCC
GCCTCCATCTTCGAGCAAGAAGAAGGGGGAAGCAAAGAAAACTGATGGCG
CACCTGCGTGTGGATTAAAAGTGGACCCTCGTAAAGCGGCCAAAGAGGCC
AGGGCTGCGAAACGAGCCGCCGGGGGTGTGGATCAGGCTACTTCCACGTC
CTCAAATAGCGGGGGAAACGCCTCGGATGCTGCAACCTCGAATAGTGGCT
CTGCTCCATCGGTGCCAAGCCTTGAAAGCGCAAAGTACGGGAACTTGCCT
ATGGTCCAGTCGCTTGGCATGACTGACAGGGTCTGGGGCCGCATCGACGG
CCTCTCGCCCTCGCGGGCTGGGCAGCGGGTGCTTCTCCGTGGCCGGCTGC
ACACCTCTCGTGCCGTAGGGAAGGGGGTCTTCCTACTACTCCGACAAGGC
ATCGCAACGGTGCAGGCAGTTGTCTACCAGGGCCCGGGGGTGGACAAGGG
CATGGTCAAGTTCGCGGGGGCGGTGCCCCGGGAGTCCGTCATCGACCTGG
TCGGGACCTTGACAGAGCCTAGAGAGCCCGTGGAGAGCGCAACGGCCAGG
CTGGTGGAAGTGCAGGTCGATGAGCTGTACGTGGTCAGCGCTGCCGAGAA
CGTCTTGCCCTTCCAGCTCGAAGACGCCTCCCGGCCCGAGGCGAGCGAGG
ACCCGGAGATGCCCTCGGTAGGGATGGACAACAGGCTGAACTACAGGTGG
ATAGATACAAGGACGGCAGCCAATCAAGCCATCTTCCGTATTCAGCACGG
CGTTTCTCAGCTCTTCCGGGAATTCCTCTCCGAGCGCGGCTTCGTGGAGA
TCCACACGCCCAAGCTGCTGGGCGGTGCCTCCGAGTCAGGATCCTCGGTT
TTCACGCTCACCTACTTCGACCAAAGTGGGTGCTTGGCGCAGTCTCCGCA
GCTCTATAAGCAAATGGCCTGTGCGTGCGGAGGGTTCGAGAAGGTCTTCG
AGGTGGGTCCAGTCTTTAGAGCGGAGAAAAGCTTCACGCACCGGCATCTG
TGCGAGTTCACGGGCCTTGACTTGGAGATGGCCATCCACGAGCATTACTA
CGAAGTCCTCGAGTTATTCTCCGACCTCTTCATTTATATCTTTGACAACC
TCGCCACTCGCTTCGCGGCTGAGCTGCAGGCTGTCAACAAACAGCATCCC
TTCGAGCCCCTTCAATTTTGCCGACCCTCTCTTCGGCTGTCGTTTGCGGA
GGGGGTGGCTCTCCTTCGAGAAGCTGGCTATGACGCCAGCGAGATGGAGG
ACCTGGACACGGAGAAGGAGAAGGCGCTGGGCAGGATAGTGAAGGAGAAG
TATAAGACGGACTTCTACATGATGGACCGGTACCCGCTCTCTGTGCGGCC
CTTCTACACGATGCCGTGTCCGGACGACCCCACGCTCTCCAATTCCTTCG
ACATGTTCATCCGAGGCGAGGAGATCGTGTCAGGGGCCCAACGGATCCAT
GACGTGGAGCTCCTGGGAGAGCGCATCGATGCCATGGGAGTGCCTCAGGA
GACGCTGCGGACATACATGGATGCCTTTCGACACGGGGCGCTGCCGCATG
GGGGAGGGGGCATAGGTCTCGAGAGGGTTGTGATGCTCTACCTGGGCCTG
AAGAACATCAGGAAGACAAGCCTTTTCCCTCGAGATCCCAAGCGATTGGC
ACCCTAGGATGTTCGAACACGAGTAGTGTCAAAAGTGAGCTAATGAAGTA
GCCACAGCCCGCCTATGTTTGAGATAAAAAGGTGCAGCGCAAGACGGTGG
GGGAAAGAAAAAAAAATCTCGACCCGAATGGAGGTATTTTCCCCTCATTG
GGAAAATACTGTATATTCGACAGGATGTAGACATGATTGACCGATAATTC
ACCGTTTCTATGAAGCAATGATTTGGTGCATGT back to topprotein sequence of rna6394 >rna6394-protein ID=rna6394-protein|Name=rna6394|organism=Nannochloropsis gaditana|type=polypeptide|length=136bp
MITLNARQRRHTSSSGALLKWMLMLSSARFVDSSSAPTNAPLPFLFMNVG
SSSFTHARSSSQLKVILGSCMDDTEAVVMKRKPRNQTKAFKILGKFLSGS
SSGVSEKQLPPDTLHQLQTIRNALERIKSYHGKLSK back to topmRNA from alignment at CM002468.1:417652..418340- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6394 ID=rna6394|Name=rna6394|organism=Nannochloropsis gaditana|type=mRNA|length=689bp|location=Sequence derived from alignment at CM002468.1:417652..418340- (Nannochloropsis gaditana)
CACTTCGTAGAGAATGATAACCTTGAACGCCAGACAAAGGCGACATACGT
CTTCGTCAGGCGCTCTCCTCAAATGGATGCTTATGTTGTCGTCAGCACGC
TTTGTTGACTCTTCTAGCGCACCAACCAACGCTCCCCTCCCCTTCCTTTT
CATGAATGTAGGATCGTCGTCTTTTACTCATGCCCGGAGTTCAAGTCAGT
TAAAAGTTATATTGGGCAGCTGCATGGACGACACAGAGGCAGTTGTGATG
AAGCGAAAGCCCCGCAATCAGACCAAAGCTTTCAAGATACTCGGCAAATT
TTTGTCAGGAAGCTCTTCGGGTGTTTCCGAGAAACAGGTTGGTTTGCAAA
TATCTGGCAACACAGGCTGGGCGATCTAGTGCTTCACGTTCGCAAACATA
TACCTGATTTACAGCTTCCACCAGACACGCTTCACCAGCTCCAAACGATA
CGCAATGCGTTGGAGAGAATAAAATCCTATCACGGCAAACTCAGTAAGTA
GACTTAGCCTTACATAGATGGCCACGAGGACGATAGTGCGAGCGCGGCTT
TCGGTGTAAGACCAGAAGCATAGACGAAGCACACCATACGAGTAGAAGCG
AGAACAAGGAAATAAAAGATCATAAATACATGCACCAAATCATTGCTTCA
TAGAAACGGTGAATTATCGGTCAATCATGTCTACATCCT back to topCoding sequence (CDS) from alignment at CM002468.1:417652..418340- >rna6394 ID=rna6394|Name=rna6394|organism=Nannochloropsis gaditana|type=CDS|length=822bp|location=Sequence derived from alignment at CM002468.1:417652..418340- (Nannochloropsis gaditana)
CTTCCACCAGACACGCTTCACCAGCTCCAAACGATACGCAATGCGTTGGA
GAGAATAAAATCCTATCACGGCAAACTCAGTAAGTAGATGATAACCTTGA
ACGCCAGACAAAGGCGACATACGTCTTCGTCAGGCGCTCTCCTCAAATGG
ATGCTTATGTTGTCGTCAGCACGCTTTGTTGACTCTTCTAGCGCACCAAC
CAACGCTCCCCTCCCCTTCCTTTTCATGAATGTAGGATCGTCGTCTTTTA
CTCATGCCCGGAGTTCAAGTCAGTTAAAAGTTATATTGGGCAGCTGCATG
GACGACACAGAGGCAGTTGTGATGAAGCGAAAGCCCCGCAATCAGACCAA
AGCTTTCAAGATACTCGGCAAATTTTTGTCAGGAAGCTCTTCGGGTGTTT
CCGAGAAACAGCTTCCACCAGACACGCTTCACCAGCTCCAAACGATACGC
AATGCGTTGGAGAGAATAAAATCCTATCACGGCAAACTCAGTAAGTAGAT
GATAACCTTGAACGCCAGACAAAGGCGACATACGTCTTCGTCAGGCGCTC
TCCTCAAATGGATGCTTATGTTGTCGTCAGCACGCTTTGTTGACTCTTCT
AGCGCACCAACCAACGCTCCCCTCCCCTTCCTTTTCATGAATGTAGGATC
GTCGTCTTTTACTCATGCCCGGAGTTCAAGTCAGTTAAAAGTTATATTGG
GCAGCTGCATGGACGACACAGAGGCAGTTGTGATGAAGCGAAAGCCCCGC
AATCAGACCAAAGCTTTCAAGATACTCGGCAAATTTTTGTCAGGAAGCTC
TTCGGGTGTTTCCGAGAAACAG back to top
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