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Properties
| Property Name | Value |
|---|
| Product | protein sel-1 |
| Orig transcript id | gnl|cribi|Naga_100047g37.6067.mrna |
| Orig protein id | gnl|cribi|Naga_100047g37.6067 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:411749..414878 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6392 ID=rna6392|Name=rna6392|organism=Nannochloropsis gaditana|type=mRNA|length=1338bp
ATGCATTATAAGCTAGGTTTAAATCAGACAAGATCAATGGTGCGTCTCCC
AGTTGCCTCCAGCCTGCTCCTGACATTCGCTGCAGGAGCCTACATTGCGT
CGGAAACCTTCAAAGCTTCAGGCGGAAAGACATTTCAAGAGTGAGTTTCT
CTAGACTTATCAGCGGTCTTGTAGAAGTTTACCTCTGGAGCGATTTGTTG
GGCAAAATGGTGCTGATTTAGAGCCGCCCTATGCCTAGTTAATTCAGCAT
AGCGTGGATAGGAACTGACATGAGCACACCCACAACAGCTTGAAATCTCT
TCCGCTGTTTGCCTACCATCCTATTTTAATGGTAACTTCCTGGCTATTCT
TCGCGCCGCTCTCTTGGAGCCTGATTCTGGCTCGGGGAACAACCATGATC
AAGGCCAAGCGCATTCTCCTTACCCAGCTTCACGCCGCTTCAATGTTCTT
AGCTGTTGTTTGCTGGATTGCAGCCTTGCTCTCTATTTTCATGCACAAGC
ACAACCTGAACAAGGAACACTTTACATCGTCGCACAGCATGGTCGGAGCC
TCAGTCTTTGTGCTAGTCTTACTCAGCTACGCGTCGGCTTTTTACAATGT
CGTCGATGTCAGGACAAAGGAGATCAAGTTTAATTGGAACTCCAAGATCC
ATAAAACGCTCGGCAAGGCGGCTCTGGTTGCTTCAGGTTTTGCCATATCA
ACGGGGCTCTTTACCCGCTGGGGCAAAACGACGTTTGAGGATAAGAATGT
ACGCATCGGTCTTGCCTTGTGTATCATTGTGCCTCAGGTAGTGGTGGCTT
TGGACGTGATGGCTCGTTTTGCTGGACACAAAAATGAGCGAAAGGGGAGT
TGAAGAGAAGAAATCTGGATAGGAAGAGATAGGACTTTGAATGACGCTCG
TGGACGATAATGGTCGCTGAAAGGCACAGCATATGAAACTGACAATAAGG
CTGTAGCTATTATGTGCTTTTCATACTTCCACAGCATCACATCACCGAGT
TAGAAAATACTGTGCCATGACTTTTGTAAAGTTTGAGTCGACATCCGTTA
TGCATACCACCTTTCAATTTTGAGGATACACGGTACAAATGTACACGCAA
TCTCACTTTGGTCTGCACAACAACCATGTTGCCTTGAAGAGTGACTGTCG
CTCTCCCGAAAAAAAGGTCTGGAAAGAGTACAGACAGGTGTGTCGTGCAC
AGGGGGCAGTCTGATTTATTTTGAGTTTTTTTCCAAGGGAAGGGTACGCG
GTCCCTTGTTCGTGGCTTACCTACAAGAATACACCGTTTCAAGTAATCTG
GAGATGAGACATGCGGTAAAGCTATACTTTCACACGTC back to topprotein sequence of rna6392 >rna6392-protein ID=rna6392-protein|Name=rna6392|organism=Nannochloropsis gaditana|type=polypeptide|length=929bp
MEVDPSFHTSGIAERCCRLERTVVRALMLVLLFSVLSTTASTDAAATIED
KATTISSNGPGGKGGPVQGPKAAGGEKNKPGKESHHNLDHLAKAKRLAII
FGRSKKGDADLDNLTRSFTWEQFGPTYCEVGRVFTEGVAGEDGSVTVARN
LTRGLDYLARAAHKYGYPHAQHRLAVAHVTGLYGEPPPLPVALPDATEAE
EIGSGGEAAALLLNHFAAMAGDVAGSMAMGFRYLYGHGVAIDCEKAALYY
EVAANVAVEELGRLKVLPPNERVRLFDGNLAGVTSQRKAAMEADQQLVDY
YKHTAEKGDVSAQVALGKLYFHGSQGVPQNLAKAAVFLEEAARAGDPLAA
GSIGHMYLLGVGVRQNNETARRFFVRGQESGDAASLNGLGHMYMYGMGVE
KNVEKAIKLLQRAAHEKGYSEAFYNLGLIYAGLVGEKEEEKEKQGEGDRS
RKSTSGGESDARADREEEPDSISLSAKHLQELREDPLLAGLPQEMFDKLA
DITLQAADFEKVARETLEKKGDKGIESKSGRLTASVTSAKELGERKGTRS
LAKALKYFSLAAQTGHMGALHKLGQMSAQGIATPRACSTAVHAFKSVAER
GPWVTAMSKALARHKRGDLLGALILYMHLAEIGYEVAQSNAALLLEEGTC
GMLSPTACQALAVRYYRHASRQGNAEASLKVGDAHYYGTAGLPVDFSRAA
RYYQTAAELRQPQAMFNLGLMHQYGVGLKQDFHLAKRFLDASAEAYPDAK
WPVNLALAGLYLHWWLMGEDQSLRESPIVTTAPGVSVLVEHSVLAKLARA
WERKKEQWRQVWADMPASWGGGAGRAGASIGVGKEEETWSWPHILEMLSA
LDTLLIVALSSAFLYVMRLRAEQREEMARRRRGRQGSEGGVPRVADVGEN
TVPLTDYQEESRAVRSADENLDIDREQQD back to topmRNA from alignment at CM002468.1:411749..414878+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6392 ID=rna6392|Name=rna6392|organism=Nannochloropsis gaditana|type=mRNA|length=3130bp|location=Sequence derived from alignment at CM002468.1:411749..414878+ (Nannochloropsis gaditana)
CTCCATTGTTCGGGTTTACACTACGAGCCTTTACCGCCGATTTGATGTGA
TATTGACGGGCAGCGTGAGCAATACTGTCATGCGTGGCGTGGGGTTTCGA
TTTGCATCATCAACATGGTCCCGCGAAAAATAGGAATGTCGCCGTCGGTC
TGTTCAAAAGGAAGCTGATCTGCCCATATCGCTTTTAAACACAGGGTTCC
TTGAGAATAAAAAGTAAAACACGCACGCTCAGTTCCGGTCAAGTTTATGA
TAGCAAGTGCTGTCCACATTGACGATAATTGCGAGTGCAATGGAGGTAGA
TCCTAGTTTTCATACCTCAGGCATCGCGGAGAGATGCTGTAGGCTTGAAA
GGACCGTCGTCCGTGCTCTCATGCTTGTTCTGCTATTTAGTGTGCTTTCC
ACCACCGCATCCACCGATGCGGCTGCCACCATCGAGGATAAGGCTACCAC
AATATCTTCAAATGGACCTGGAGGCAAAGGCGGCCCTGTCCAAGGCCCCA
AAGCCGCTGGCGGGGAGAAGAACAAgcccgggaaggagagccaCCACAAC
CTCGACCATCTCGCCAAAGCCAAACGCCTTGCCATTATCTTCGGGCGTTC
CAAAAAGGGGGACGCCGACTTAGACAATCTTACGCGATCGTTCACTTGGG
AGCAATTCGGGCCGACTTACTGTGAAGTCGGGCGAGTTTTTACTGAAGGG
GtggcaggggaggacgggtccGTGACGGTGGCTCGAAATTTGACGCGAGG
ACTAGACTACCTGGCACGCGCCGCCCATAAGTATGGCTATCCTCACGCAC
AACACCGTTTGGCCGTCGCCCACGTGACGGGCCTATACGGCGAGCCCCCG
CCACtgcccgtcgccctccccgatgccacggaggcagaggagattGGCTC
AGGCGGCGAGGCGGCAGCCTTGCTTCTTAACCACTTCGCTGCGATGGCGG
GAGACGTTGCAGGATCTATGGCTATGGGTTTCCGGTACTTGTATGGACAT
GGCGTGGCTATAGATTGTGAGAAGGCCGCCTTGTACTACGAGGTGGCCGC
GAATGTCgccgtggaggagttggGGAGGCTGAAGGTGTTGCCGCCCAATG
AGCGGGTGCGCCTCTTCGACGGGAACCTGGCGGGGGTAACATCTCAACGA
aaggcggccatggaggcaGATCAGCAGCTGGTCGACTATTACAAGCACAC
TGCCGAGAAAGGCGACGTGAGCGCGCAGGTCGCTCTGGGCAAGCTCTACT
TCCATGGCTCCCAAGGAGTGCCTCAAAacctggccaaggccgccgtaTTT
CTTGAGGAGGCCGCCCGGGCAGGGGATCCCCTGGCTGCGGGCAGCATAGG
GCACATGTACCTGTTGGGGGTGGGCGTCCGGCAGAACAACGAGACCGCTC
GTCGGTTTTTTGTGCGCGGACAAGAGTCAGGGGACGCAGCCAGTCTGAAC
GGGCTGGGGCATATGTACATGTACGGAATGGGCGTGGAAAAAAAtgtgga
gaaggcgatcaAACTCCTGCAAAGGGCAGCACATGAGAAGGGATACTCGG
AGGCCTTCTACAATCTGGGCTTGATCTACGCAGGCCTTgtaggggagaaa
gaggaggaaaaagagaagcaAGGCGAGGGGGACAGAAGCCGGAAATCGAC
AAGTGGAGGAGAGTCGGATGCACGCGCAGACCGAGAGGAGGAACCAGACT
CCATTTCACTGTCCGCGAAGCATTTACAGGAACTGAGAGAGGACCCTTTG
CTCGCGGGATTGCCCCAAGAAATGTTCGACAAGCTCGCAGACATCACCCT
ACAGGCTGCCGACTTTGAGAAGGTCGCAAGAGAGACAttggagaaaaagg
gagacaagggaatTGAAAGCAAGTCGGGTCGCTTGACAGCATCCGTTACG
TCAGCAAAGGAACTTGGGGAGCGTAAGGGGACCAGGAGCCTCGCGAAGGC
TCTGAAATACTTCTCCCTGGCCGCACAGACCGGGCACATGGGCGCCTTGC
ACAAGCTGGGCCAGATGTCCGCCCAAGGCATCGCCACGCCCCGCGCCTGC
TCCACGGCCGTTCACGCCTTCAAAAGCGTCGCCGAGCGCGGACCTTGGGT
CACTGCCATGAGCAAGGCCCTTGCCCGGCACAAGCGCGGGGACCTCCTTG
GCGCCCTAATCTTGTACATGCACCTGGCTGAGATCGGCTACGAAGTCGCG
CAGTCCAACGCCGCGCttctcttggaggaggggacctGCGGGATGCTCTC
TCCGACAGCCTGCCAGGCGCTTGCAGTCCGATATTATCGCCACGCCTCGC
GGCAAGGCAACGCGGAAGCGAGCCTGAAAGTGGGAGATGCTCATTATTAC
GGTACCGCTGGTCTCCCCGTCGACTTTTCGCGCGCGGCACGTTACTACCA
AACGGCGGCCGAGCTCCGTCAGCCTCAGGCCATGTTCAACCTGGGGCTCA
TGCACCAGTACGGTGTAGGGCTGAAGCAAGACTTCCACCTGGCCAAGCGA
TTTCTTGACGCCTCTGCGGAAGCCTACCCGGACGCCAAGTGGCCCGTGAA
CCTGGCGCTGGCGGGGCTCTACCTCCACTGGTGGCTCATGGGGGAGGATC
AATCGCTGAGGGAGTCGCCGATCGTGACGACGGCCCCCGGGGTGAGTGTC
CTCGTGGAACACTCGGTCTTAGCAAAGCTGGcgagggcctgggagaggaa
gaaggagcaaTGGCGACAGGTGTGGGCCGATATGCCAGCCAGTTGGGGGG
GCGGCGCAGGGCGTGCTGGAGCATCCATAGGAGtcggcaaggaagaggag
acatgGAGCTGGCCTCATATTTTAGAAATGCTGTCCGCATTGGACACTCT
GCTAATTGTGGCCCTGTCCTCCGCATTCTTGTACGTAATGCGCCTTCGGG
CAGAGCAACGCGAGGAAATGGCCAGACGTCGAAGAGGGCGGCAGGGGAGT
GAGGGTGGTGTGCCTAGGGTAGCAGACGTGGGAGAGAATACGGTACCTTT
GACAGATTATCAGGAAGAATCAAGGGCTGTAAGATCAGCGGACGAAAATT
TAGATATAGATAGAGAACAACAAGACTGAAGAATGCCTGACGTGaaacag
gaagaaggaaattAATAGCCAAGAAAGGGT back to topCoding sequence (CDS) from alignment at CM002468.1:411749..414878+ >rna6392 ID=rna6392|Name=rna6392|organism=Nannochloropsis gaditana|type=CDS|length=2790bp|location=Sequence derived from alignment at CM002468.1:411749..414878+ (Nannochloropsis gaditana)
ATGGAGGTAGATCCTAGTTTTCATACCTCAGGCATCGCGGAGAGATGCTG
TAGGCTTGAAAGGACCGTCGTCCGTGCTCTCATGCTTGTTCTGCTATTTA
GTGTGCTTTCCACCACCGCATCCACCGATGCGGCTGCCACCATCGAGGAT
AAGGCTACCACAATATCTTCAAATGGACCTGGAGGCAAAGGCGGCCCTGT
CCAAGGCCCCAAAGCCGCTGGCGGGGAGAAGAACAAgcccgggaaggaga
gccaCCACAACCTCGACCATCTCGCCAAAGCCAAACGCCTTGCCATTATC
TTCGGGCGTTCCAAAAAGGGGGACGCCGACTTAGACAATCTTACGCGATC
GTTCACTTGGGAGCAATTCGGGCCGACTTACTGTGAAGTCGGGCGAGTTT
TTACTGAAGGGGtggcaggggaggacgggtccGTGACGGTGGCTCGAAAT
TTGACGCGAGGACTAGACTACCTGGCACGCGCCGCCCATAAGTATGGCTA
TCCTCACGCACAACACCGTTTGGCCGTCGCCCACGTGACGGGCCTATACG
GCGAGCCCCCGCCACtgcccgtcgccctccccgatgccacggaggcagag
gagattGGCTCAGGCGGCGAGGCGGCAGCCTTGCTTCTTAACCACTTCGC
TGCGATGGCGGGAGACGTTGCAGGATCTATGGCTATGGGTTTCCGGTACT
TGTATGGACATGGCGTGGCTATAGATTGTGAGAAGGCCGCCTTGTACTAC
GAGGTGGCCGCGAATGTCgccgtggaggagttggGGAGGCTGAAGGTGTT
GCCGCCCAATGAGCGGGTGCGCCTCTTCGACGGGAACCTGGCGGGGGTAA
CATCTCAACGAaaggcggccatggaggcaGATCAGCAGCTGGTCGACTAT
TACAAGCACACTGCCGAGAAAGGCGACGTGAGCGCGCAGGTCGCTCTGGG
CAAGCTCTACTTCCATGGCTCCCAAGGAGTGCCTCAAAacctggccaagg
ccgccgtaTTTCTTGAGGAGGCCGCCCGGGCAGGGGATCCCCTGGCTGCG
GGCAGCATAGGGCACATGTACCTGTTGGGGGTGGGCGTCCGGCAGAACAA
CGAGACCGCTCGTCGGTTTTTTGTGCGCGGACAAGAGTCAGGGGACGCAG
CCAGTCTGAACGGGCTGGGGCATATGTACATGTACGGAATGGGCGTGGAA
AAAAAtgtggagaaggcgatcaAACTCCTGCAAAGGGCAGCACATGAGAA
GGGATACTCGGAGGCCTTCTACAATCTGGGCTTGATCTACGCAGGCCTTg
taggggagaaagaggaggaaaaagagaagcaAGGCGAGGGGGACAGAAGC
CGGAAATCGACAAGTGGAGGAGAGTCGGATGCACGCGCAGACCGAGAGGA
GGAACCAGACTCCATTTCACTGTCCGCGAAGCATTTACAGGAACTGAGAG
AGGACCCTTTGCTCGCGGGATTGCCCCAAGAAATGTTCGACAAGCTCGCA
GACATCACCCTACAGGCTGCCGACTTTGAGAAGGTCGCAAGAGAGACAtt
ggagaaaaagggagacaagggaatTGAAAGCAAGTCGGGTCGCTTGACAG
CATCCGTTACGTCAGCAAAGGAACTTGGGGAGCGTAAGGGGACCAGGAGC
CTCGCGAAGGCTCTGAAATACTTCTCCCTGGCCGCACAGACCGGGCACAT
GGGCGCCTTGCACAAGCTGGGCCAGATGTCCGCCCAAGGCATCGCCACGC
CCCGCGCCTGCTCCACGGCCGTTCACGCCTTCAAAAGCGTCGCCGAGCGC
GGACCTTGGGTCACTGCCATGAGCAAGGCCCTTGCCCGGCACAAGCGCGG
GGACCTCCTTGGCGCCCTAATCTTGTACATGCACCTGGCTGAGATCGGCT
ACGAAGTCGCGCAGTCCAACGCCGCGCttctcttggaggaggggacctGC
GGGATGCTCTCTCCGACAGCCTGCCAGGCGCTTGCAGTCCGATATTATCG
CCACGCCTCGCGGCAAGGCAACGCGGAAGCGAGCCTGAAAGTGGGAGATG
CTCATTATTACGGTACCGCTGGTCTCCCCGTCGACTTTTCGCGCGCGGCA
CGTTACTACCAAACGGCGGCCGAGCTCCGTCAGCCTCAGGCCATGTTCAA
CCTGGGGCTCATGCACCAGTACGGTGTAGGGCTGAAGCAAGACTTCCACC
TGGCCAAGCGATTTCTTGACGCCTCTGCGGAAGCCTACCCGGACGCCAAG
TGGCCCGTGAACCTGGCGCTGGCGGGGCTCTACCTCCACTGGTGGCTCAT
GGGGGAGGATCAATCGCTGAGGGAGTCGCCGATCGTGACGACGGCCCCCG
GGGTGAGTGTCCTCGTGGAACACTCGGTCTTAGCAAAGCTGGcgagggcc
tgggagaggaagaaggagcaaTGGCGACAGGTGTGGGCCGATATGCCAGC
CAGTTGGGGGGGCGGCGCAGGGCGTGCTGGAGCATCCATAGGAGtcggca
aggaagaggagacatgGAGCTGGCCTCATATTTTAGAAATGCTGTCCGCA
TTGGACACTCTGCTAATTGTGGCCCTGTCCTCCGCATTCTTGTACGTAAT
GCGCCTTCGGGCAGAGCAACGCGAGGAAATGGCCAGACGTCGAAGAGGGC
GGCAGGGGAGTGAGGGTGGTGTGCCTAGGGTAGCAGACGTGGGAGAGAAT
ACGGTACCTTTGACAGATTATCAGGAAGAATCAAGGGCTGTAAGATCAGC
GGACGAAAATTTAGATATAGATAGAGAACAACAAGACTGA back to top
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