rna6318, rna6318 (mRNA) Nannochloropsis gaditana

Overview
Namerna6318
Unique Namerna6318
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length735
Alignment locationCM002468.1:236637..237333 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100246g8.10064.mrna
Orig protein idgnl|cribi|Naga_100246g8.10064
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:236637..237333 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100246g8gene6107Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6318rna6318-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24369.1cds6303Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6318 ID=rna6318|Name=rna6318|organism=Nannochloropsis gaditana|type=mRNA|length=735bp
ATGCCCTCTTGTGTTACCCCATCCCCGCTCTTCGACTCTTATATATTGGT
ACTTTTCTCATGTGGGACCCTCATACCTTCGGTTTTTACACCCGTGGGGC
CTTTTGGATGGAAATTTAAATTAAATGAGGCCAAGCATATTTTGGTCGAG
GCTGGCACTGCTGAACTCTCCGACATCATCCCTGTCCATGTTTTTTGCGA
AGCGACTTACGAGGAAGTGGAGAAGGCCCTCATTAAAGATGTGCGCCTCC
CTCAGTTGATTTCCAGCCCTAAGGGTGGTAAGAATGTTGACAATAACACG
TCAAGTATAACAACGACTGACGCCGTCACCACTCGCAGTAGGAAAAGAGC
GGCAAGCAGAAAGAAGGGGAAACAAATTTGCAGGAGTGCTCTCGTGTATC
GAGCACTAGATGCAGTGGATTCACTTGTAAGAGACGCAACATTTGATCCC
TTTCATCGGCAGCACGGTCGAATTATTGGGACAAATCACTCCCACAAGCT
GCTTCTATCTCTATGCGAAGAGTGGGGCCCTGCCATGGCGGACTTGGTGG
TCTTGAAGAAGGAAGAAATTGAAAAATTTTGTCCCTCTGGGCATTATCCA
ACACCGGTCTTGTGGAAGGAAGGAAAAGAGGTTACGATAGGTGCTGTAGT
ACGTCGCATGGTAGAAGTCTTGAGGGAGACACGAAATACGAAAGACAGAG
ATAAAGTAAGAAAGAGAGAGAGGGAGCAAGAGTGA
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protein sequence of rna6318

>rna6318-protein ID=rna6318-protein|Name=rna6318|organism=Nannochloropsis gaditana|type=polypeptide|length=153bp
MEGQGLANMLEFSKPQKLREISPSSEMGRDNNEKVYQFRYWKEIQAVKRM
CRNKFEDLDQTSLTVHKDPPNDCSHQPAIQDPPSPSNSPSSSGSSALSAG
GGTKLSQAQSGTRTRIKELEEEIAYWHQAFIDLSVTNNALLSGIVADAGN
EMK
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mRNA from alignment at CM002468.1:236637..237333-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6318 ID=rna6318|Name=rna6318|organism=Nannochloropsis gaditana|type=mRNA|length=697bp|location=Sequence derived from alignment at CM002468.1:236637..237333- (Nannochloropsis gaditana)
ATGGAAGGGCAGGGGCTGGCGAACATGCTCGAGTTTTCCAAGCCACAAAA
ATTGAGGTTTGTACCTTTAGGATTTTGATAGGAAAATTGCATATGTGCAC
ATGTAGTATCTGACCGTCAGCTATGAATGCTATAATTCAGACAAAGTGCG
TCAAAGACATGCTGCCAATCATTCACAATTTTCTCTCCAAACATCTTTGC
CGTGATAAGAGAGATAAGTCCGTCTTCTGAGATGGGGCGAGACAATAACG
AGAAAGTATATCAATTTCGATACTGGAAAGAAATCCAAGCCGTGAAGGTA
CATAGGGAGGCATGCACTCAAAAGAAGGCAAAGTTGTAAAGTCATGAAGA
CTCATAAGTCCTTACGAACTCCATCCCAGAGAATGTGCAGAAATAAATTT
GAGGATCTGGACCAGACGAGCTTGACCGTGCACAAAGACCCGCCAAACGA
TTGCAGCCATCAGCCAGCTATACAGGATCCTCCTTCGCCATCAAATTCTC
CCTCGTCTTCGGGTTCGTCCGCCTTGTCGGCGGGGGGGGGTACAAAGCTA
TCTCAAGCTCAAAGTGGAACACGGACACGGATTAAGGAGCTTGAAGAGGA
AATTGCATATTGGCATCAGGCTTTCATCGATTTGTCCGTGACTAATAATG
CGCTCCTGTCAGGTATAGTGGCGGATGCGGGCAATGAAATGAAATAA
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Coding sequence (CDS) from alignment at CM002468.1:236637..237333-

>rna6318 ID=rna6318|Name=rna6318|organism=Nannochloropsis gaditana|type=CDS|length=1386bp|location=Sequence derived from alignment at CM002468.1:236637..237333- (Nannochloropsis gaditana)
AGAATGTGCAGAAATAAATTTGAGGATCTGGACCAGACGAGCTTGACCGT
GCACAAAGACCCGCCAAACGATTGCAGCCATCAGCCAGCTATACAGGATC
CTCCTTCGCCATCAAATTCTCCCTCGTCTTCGGGTTCGTCCGCCTTGTCG
GCGGGGGGGGGTACAAAGCTATCTCAAGCTCAAAGTGGAACACGGACACG
GATTAAGGAGCTTGAAGAGGAAATTGCATATTGGCATCAGGCTTTCATCG
ATTTGTCCGTGACTAATAATGCGCTCCTGTCAGGTATAGTGGCGGATGCG
GGCAATGAAATGAAATAAAGAGATAAGTCCGTCTTCTGAGATGGGGCGAG
ACAATAACGAGAAAGTATATCAATTTCGATACTGGAAAGAAATCCAAGCC
GTGAAGATGGAAGGGCAGGGGCTGGCGAACATGCTCGAGTTTTCCAAGCC
ACAAAAATTGAGAGAATGTGCAGAAATAAATTTGAGGATCTGGACCAGAC
GAGCTTGACCGTGCACAAAGACCCGCCAAACGATTGCAGCCATCAGCCAG
CTATACAGGATCCTCCTTCGCCATCAAATTCTCCCTCGTCTTCGGGTTCG
TCCGCCTTGTCGGCGGGGGGGGGTACAAAGCTATCTCAAGCTCAAAGTGG
AACACGGACACGGATTAAGGAGCTTGAAGAGGAAATTGCATATTGGCATC
AGGCTTTCATCGATTTGTCCGTGACTAATAATGCGCTCCTGTCAGGTATA
GTGGCGGATGCGGGCAATGAAATGAAATAAAGAGATAAGTCCGTCTTCTG
AGATGGGGCGAGACAATAACGAGAAAGTATATCAATTTCGATACTGGAAA
GAAATCCAAGCCGTGAAGATGGAAGGGCAGGGGCTGGCGAACATGCTCGA
GTTTTCCAAGCCACAAAAATTGAGAGAATGTGCAGAAATAAATTTGAGGA
TCTGGACCAGACGAGCTTGACCGTGCACAAAGACCCGCCAAACGATTGCA
GCCATCAGCCAGCTATACAGGATCCTCCTTCGCCATCAAATTCTCCCTCG
TCTTCGGGTTCGTCCGCCTTGTCGGCGGGGGGGGGTACAAAGCTATCTCA
AGCTCAAAGTGGAACACGGACACGGATTAAGGAGCTTGAAGAGGAAATTG
CATATTGGCATCAGGCTTTCATCGATTTGTCCGTGACTAATAATGCGCTC
CTGTCAGGTATAGTGGCGGATGCGGGCAATGAAATGAAATAAAGAGATAA
GTCCGTCTTCTGAGATGGGGCGAGACAATAACGAGAAAGTATATCAATTT
CGATACTGGAAAGAAATCCAAGCCGTGAAGATGGAAGGGCAGGGGCTGGC
GAACATGCTCGAGTTTTCCAAGCCACAAAAATTGAG
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Synonyms
Publications