rna6301, rna6301 (mRNA) Nannochloropsis gaditana

Overview
Namerna6301
Unique Namerna6301
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1177
Alignment locationCM002468.1:205228..206107 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100508g4.5686.mrna
Orig protein idgnl|cribi|Naga_100508g4.5686
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:205228..206107 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100508g4gene6093Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24384.1cds6286Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6301rna6301-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6301 ID=rna6301|Name=rna6301|organism=Nannochloropsis gaditana|type=mRNA|length=1177bp
TCTGAACAAGATCTTCCATGTTAAGTCAAGCAACCCTTTCCTTTTTGCAA
AATTAAAGGGTACACCTGCATCTATCGCCCTGAAAAGCGACTCGACCTTT
CTTCCTCCTCATGTCCACGGTAGCAGCTTTTAAAGCAGGGGGGCACAATG
CTTTTGTCGTAGGTTGGACCGGAGAAGTGGGCAAGGAGGTTGTCTCGTCT
CTGGCCGCCACGGATGCCTACAAGAAAGTTTATCTGATCGGACGCCGCAA
TGCCGAGCTCCCCGCAGGGCCCGGGTACGAGAAAATGGAACAACGAATCC
TGGATTTCGACTCCCTCTTGACCGACCCACCCTCTCCGGCCACCATCGCG
GCTTTTGCCGACGCCGACGTTGGTTTCTGTTGCCTGGGGACCACCAGGGG
GAAAAGCGGGGTCGATGGTTTCATCAAGGTGGATTATGAGTACGTGCTGG
GCGCTGCCCGCGCCGCCAAAGCAGGCGGCCTCCAGGCCTTCCACGTCGTC
ACCTCCGTGGGCAGCAACGCCGCCAGCCGCATGCTCTACCCCAAGACCAA
AGGCCGTGCCGAGGAGGGTCTCAAAGAATTAAGCCTGGCGCGGCTCTCCA
TCTACCGCCCCGGCGTCCTTCTCTGCAATCGGGCCGAGAAACGGTTGTTG
GATCAGGCCGGTCGTTTCTTTCTGGCGCCGGTAGCGGCCGTGGCGCCCAC
CGCCATGACCGTCCCCACCAAGGTTGTGGGGCGAGCGATGGTAGTCAATT
CGGTCCTGGGAGGGGTGGAGGGAGGCACAGAAACGTTGGAAAACGCCGCG
ATCCATGCCATGGCCAAGAAAGATCTGTAGAAAAAGCGCGCGAAGGACGG
AGGAAGGCGGGAATGGAGGGAGGGAAAAGGGCGAGAGGTGGGGAGGGAGG
GTAGGGGTAGGAGGACATCGACAAGAGGGCTCCCCGCGGTCAAGGGAAGG
GGGGGCACGCCAAAGCAAGACATGGAAATGCCGCAGCCACGGAACGAACG
AGCCAAAGGCAAACGTGACAAGGGAAACACCGAGCAGGGAGGGGTCGAAG
TGCGGGGTGGGTCTTCCTCCATCTGACTTTTGATTTCGCGCAATCCCTCT
TCGAGGGCGCCGTCTTCTCCTCATCCTACAGCCCCCCGTCCCGCCGTTGC
TTCCGCCCCAACAACCTGTCGCTTATT
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protein sequence of rna6301

>rna6301-protein ID=rna6301-protein|Name=rna6301|organism=Nannochloropsis gaditana|type=polypeptide|length=102bp
MARSSQDENGRKKRQKKEQQQHHHHQQANGMEDDDDGDDSSDEDYVPPDA
GQYLLILFLFRTCFQSFLPDLWCLWQAGGESGMFFFPSPTPSHSLTEAHF
HE
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mRNA from alignment at CM002468.1:205228..206107-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6301 ID=rna6301|Name=rna6301|organism=Nannochloropsis gaditana|type=mRNA|length=880bp|location=Sequence derived from alignment at CM002468.1:205228..206107- (Nannochloropsis gaditana)
AGCAGCTACCGGAGGCCGGAGACAAGTTAAATTTCAATGAGGCCTTTTGG
AAGTCGACGCGGAATTTGTTTCGGATTTTGTTCTTCCCTATGACTAATAA
ACTTCTCTGGCATGCTAGATCTTGAATGGCACGCTCGAGTCAGGATGAAA
ACGGGCGTAAAAAAAGACAGAAGAAGGAACAACAACAACACCACCACCAC
CAACAAGCAAATGGGATGGAGGACGACGATGACGGAGATGATAGCTCGGA
CGAGGACTACGTGCCACCCGACGCAGGTCAGTACTTATTGATTCTCTTTT
TATTTCGTACTTGTTTCCAAAGCTTCCTGCCGGATTTGTGGTGCTTGTGG
CAAGCCGGTGGGGAGAGTGGCATGTTTTTCTTCCCTTCTCCAACGCCTTC
TCACTCACTGACTGAGGCACATTTCCACGAGTGAACAGAGGGAGGGGATG
AGAGAAAAAAAGCTTTATGTATTAGAAGCAGGGTTTGACTCCGTCGAACG
CAAAATTCTTGTACTTCCCTGCTTTCCTGTTGGCTTAACGGACTTCCTTT
TCTGGGTGGACAGATGGAGAGGAAGACACGCCGGGCGTGGGCATCCGGGG
TAGCCGCGGGCATGGCAATGACGGTGTGAGCCGTGCAAGCCTGCCTCGAC
CTGGGACGCGGCGGGCGCAGGAAGAGCAAGAACAACGCGTGGAGGCCATG
TGGGAAGAAATGCAGCGGGAAGATCGGAACGGTCTAGCCAAGGTGTTGAG
GAGCACGGAGGGCAGAGGGACAGGCTCGGGGGGGAAAGCCAGGAATGGGG
AGAAGAAACGACGGAGAGCCCAAGAGCTGTTGGCGGGCATTTTTGGAAAC
AACACGGCGTCGTCGATGGTGGCGAAAGCG
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Coding sequence (CDS) from alignment at CM002468.1:205228..206107-

>rna6301 ID=rna6301|Name=rna6301|organism=Nannochloropsis gaditana|type=CDS|length=309bp|location=Sequence derived from alignment at CM002468.1:205228..206107- (Nannochloropsis gaditana)
ATGGCACGCTCGAGTCAGGATGAAAACGGGCGTAAAAAAAGACAGAAGAA
GGAACAACAACAACACCACCACCACCAACAAGCAAATGGGATGGAGGACG
ACGATGACGGAGATGATAGCTCGGACGAGGACTACGTGCCACCCGACGCA
GGTCAGTACTTATTGATTCTCTTTTTATTTCGTACTTGTTTCCAAAGCTT
CCTGCCGGATTTGTGGTGCTTGTGGCAAGCCGGTGGGGAGAGTGGCATGT
TTTTCTTCCCTTCTCCAACGCCTTCTCACTCACTGACTGAGGCACATTTC
CACGAGTGA
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Synonyms
Publications