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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100283g5.8472.mrna |
| Orig protein id | gnl|cribi|Naga_100283g5.8472 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:187352..192184 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6293 ID=rna6293|Name=rna6293|organism=Nannochloropsis gaditana|type=mRNA|length=889bp
GTGGCCTTGGCTGAAATCGCTCAAGACGGGGCCCGTCGACTTGTTGCCCT
GCCTGGACGCGTACCAGGGTGGCCGAGAGGGGCCGGAAGGGGGGAGGGTG
TGGCGGGAGTTTTGTCTTCGCCACGGTCGTAGCATGCGCCGGGCCGGGAT
CGGGAGACGTATGGGGGGAGGGGGAGGGGGAGGGGCTGGTTGGGGGGAAG
AGTATACGCTGAGCGTGGAGATTTTCGACCGAAAAGGGGGGTTCCGTCTC
TTCTGCTCCTACGGACGCGTCAGCATCATGCACCAAGGAGTCGGGGTGGA
AGGGCGGTGGATGACAAAGCTCGCGGTCACTGGCTTTGCCTCCTGCTGGC
ATTTCTCGGCGGCTTCCCGGGATTCTGTCCACGGTCGCTTTGAGACCATC
AAGGATTACTTCGAACGCGCCCACGAGCCAGGACTGGAGCATTGCTTGTG
CACGGAAGTGACAGCCATGCATAAGAAAACTGGGCGGATGGCGGTGCTGT
ACGCTTCCAGCAAAGAATCTCGCCGTCGGCTGGCGGGGGAAAAGAACGGC
ACGTCGTACTTTGAAGAGGAGCTTCGCCCTGCCTTTGCCTCCTCGGCCGG
GGTCATGGCGTCTACCGCAAGCGGGTCCTCCCATCCTGGCCTTCCTCCTT
CTCTCTCCTCCTTCTGCGCCCCCTCGCCCGGTATTCCTTACTTGGCCGCC
TCCGGCATTGCAGTCAGTAAGGTCTCCACCCCTCCCTCCACCTCCTCCCT
CTCTCCACTGCCCGCCGGTATCCCCTCGATGGACGAGGAGAAGGAACAAA
AGTACCGGGTAGACCGGTTGTATCTGATATTTTCCACGGAACGTCGATGG
GATTTGCCCAAAATCTTTGAGGGATTGGAATGGACGTAA back to topprotein sequence of rna6293 >rna6293-protein ID=rna6293-protein|Name=rna6293|organism=Nannochloropsis gaditana|type=polypeptide|length=766bp
MVSATRRHRRYGGYGGGSGGRGKGTGRGGAHAVGQQGVDETLLRKYHQAA
DLIAPVERDEEKRNVHRVREYWLEHEAIKHLATLQALQIPVATFESHFLQ
ANAHNPKYVRGTLRETVRTFFREFTDEAGVRVLTLKLSERMVYSKPSKNI
LKRWNLSNGMLYFFYAAVGRSAPPTGDEILEPFYFQKRVDFIRKVCGGGE
GAGSDVGLALSLPPALRPAGERGQGEAVGGGEGLTEAGVGTAATAAGGLG
GRGERHRAGSHDFFYQQEQLQQAGRSRKRRREGGGAPLPLSELYVPADPV
SASVEKAGVKEEAPVEVEDGDEEAVHLLLSFLKERVWAGVEEKAVRDAVS
AGVWRLVAEESLEADPSLAYLARPARTFWVPSLAPPAWEEGKEGGVEGGV
EGWGWENGCLPVFVRACRRNWAKVEGVWEAWNEDLGNNALEWKELWRDVG
AEEGEEGGVEEDLGMDLGLELKAPVAGESGRKEEEDSFLLFPCSLEGAQA
ETENVSMPSMGVMRDGREDVTEGVTEGGLPEHRGAPVVFAPVPDPNGDFP
PLGYGQTRPFPSLVPSTDPSSLSFSSTPTRSVTVAPPPGDVFFSVSVEGE
DGKEDGREDRREDGREGAVFQEGALKPWVKQEEMREEREEEATEVVSAGT
SAAATVEGGEGGTEEVWEDGEEGRMMMDLGLNMGDATLQAFMAGVGGGME
GGKEGGKGGVGGREGMTGEVNTSGRGMGEGGCGLVDESFYFAYPGPQSEV
GSNGEVPPLPVSENLF back to topmRNA from alignment at CM002468.1:187352..192184- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna6293 ID=rna6293|Name=rna6293|organism=Nannochloropsis gaditana|type=mRNA|length=4833bp|location=Sequence derived from alignment at CM002468.1:187352..192184- (Nannochloropsis gaditana)
GATACACCTCAATGCATCTATTAACAGCTCAAAGCTAGAAAGACCAAAAG
CTTGTATGAGTCACATAATGTCTCCACACATGCACGTAGCCTTGCCCAGA
AATTCTTTTTTAAGTTCAAGCCTTTCGAAAAAACCTCCCAGCTTTTTTAT
TTCATTTTTTCCCCGCCCCGCTCGCTTTCAGGGCTTGGCATGTTCTTGTT
TCTTATATGCGTGTTTACGCGACCCCCATTCGGCACATTCTTCTGTTCCC
TTTGCGTCCATGTTATCCACCATGCATGTGCCTCTGCTGGCATGGACATA
CGTTTTCGACGTTTCTGGGAGTCGGTGGTGATCCATTTCCCTTTTTTCGT
CTGCTCTGACATCAGCGTGTACGTACAGCGAGCAGAAGAAAGGAGCTTTC
TTGGCAGCTGGTGCAGTCAGCAAAATTTCCAGGCGTTGATCACTTGCAAG
GTGCGTGCCCTAGACAAATTCCCACAGCCAATGCACTTCAAAATAGTATT
GGAGGATTCGTGTTCGTTGTCACCGGTGTCTATGGTGAGAAAAGTGGTTG
AATGTGAGGGAAAGGAAGCGCATCCTTCGACGGCCCACGGGGGTGTTCTG
CGGACACGCACGTTGCGACCGAAGTTGCTTCCCTGTTGTCATTTTTGACA
GTAGTGGGCCGCGGTGTCGTATCCGTCCTCACCGCGCACTTGAGTGTTAG
TATTCTCACATGTAGTGTACAGTGCGTGTCGAAAAGTCCATTCTAGCTCC
GAGTTACGCCTCGTGTAGAAGTGGCAGAATGCGATCAAGCAGAAATTGCC
TTGTTATGTCCCCAACCTCCCCCGGACGCCCATACTCAATGTGCACACAG
TTACCAGCCGACATCTTGATGATATGTGGGAGAGCATGATAGCGAGGTGT
CTGTGTGTCTTGTGGCGTGCCTTGGGGTGATGTATCGATGCATTTCTTCA
AGAGACCAGCGAAGCGGAGAGGGGAAGGTGCGGGGTAGCCCCTGGACCTT
ATAGGGATGAGCACACCTTACGTTTTTGTGTGTGGTGTTGCTAACAAGGC
TGCTTCGCAACGGGATGAGGTTAGATCGTGATGCTCGACACTTGCAGGAA
GAGTACGCTTGAGGCTTTACCAGGCGAGGCGGTGTCGAGTAAGGCCTCCA
AGGAAACCGGCCATCCACCTCCCGACGTCTTCGTGTCGTCGCTTGAAGGA
AGCATGAGTGTACAATCTTCATCTCTTTTTGATCAACCTTGTCTCACCGT
CCATGCCTTTGCTCGTATTTTCTCCCCGGTCCTGACAGGAAAGACACCCA
CGCACTGACCCTTCCCGGCACGGTGATTGGGACACGCGAGACGAACCTAG
AGGAGACAGTCCGCGCCACCTTCCCTCTCCTGCTCCCCCGCCTTTGTACA
AACAGCACTGCGGGGTTGAGAGGAAATTTGGAAGGGAAGAGTAGTGCAGA
CGTCTCTAGTAGCGTGACTGGCTGTGCCGACGAGTTGCAGCAGCCACAGC
CCTTGCCGAGCACCCCAAAGGGTCCGAGGCAATCCCCAGAGACAACAAGC
CACGAGAACCGTCCTTTGCCGCTGCGCACGGCGCGAGGGACGTTTTGCAG
CCGCGCCGTTTACGAGGAAACGGACGTCGGTACCAATTTATTGAAGAGCA
CGGGCAAGCATAGCAGCCAACGGCGTCGAGTCGGCACCATGGTCTCTGCA
ACGCGGCGCCATCGGCGGTACGGAGGTTACGGCGGAGGCAGTGGGGGGCG
GGGGAAGGGCACAGGGCGGGGGGGTGCCCACGCTGTGGGCCAGCAGGGCG
TGGACGAGACGCTTTTGCGCAAGTACCACCAGGCGGCGGACCTGATCGCG
CCGGTGGAACGGGACGAGGAGAAGCGGAACGTGCACCGGGTGCGGGAGTA
CTGGCTCGAGCACGAGGCGATCAAGCACTTGGCCACCCTGCAAGCCCTGC
AGATTCCCGTGGCCACGTTTGAATCCCACTTCTTGCAGGCGAACGCCCAC
AACCCCAAGTATGTCCGAGGGACGTTACGGGAAACGGTTCGCACCTTCTT
CCGAGAATTCACCGACGAGGCCGGCGTCCGGGTCTTGACGCTGAAATTGT
CGGAAAGGATGGTGTACTCGAAACCCAGCAAGAATATTTTGAAACGCTGG
AATCTGAGCAACGGCATGCTGTACTTCTTCTACGCGGCGGTGGGTCGGTC
GGCACCGCCGACAGGGGACGAAATCCTGGAGCCTTTTTATTTCCAAAAGC
GCGTGGACTTTATCCGCAAAGTGTGCGGTGGTGGGGAAGGCGCGGGGAGT
GACGTGGGACTGGCGTTGTCCCTTCCCCCGGCCCTACGGCCTGCGGGCGA
ACGAGGGCAGGGCGAGGCGGTGGGCGGGGGAGAGGGGCTGACAGAGGCAG
GGGTAGGAACGGCAGCCACCGCCGCGGGAGGGTTGGGAGGCAGGGGAGAA
CGGCACCGCGCGGGTTCACACGACTTTTTCTACCAGCAAGAGCAACTGCA
GCAAGCGGGCAGATCCAGGAAACGCCGCCGGGAAGGGGGAGGGGCGCCTC
TACCCCTGTCGGAGCTCTATGTCCCCGCCGACCCGGTCAGTGCCTCCGTG
GAGAAGGCGGGCGTGAAGGAGGAAGCCCCGGTTGAAGTGGAGGATGGAGA
CGAGGAGGCAGTGCACCTGTTGCTAAGCTTTTTGAAAGAGCGAGTTTGGG
CGGGCGTGGAGGAGAAAGCCGTGCGGGACGCCGTATCGGCGGGGGTGTGG
CGCTTGGTGGCCGAAGAAAGCCTGGAGGCGGATCCCTCCCTTGCTTACCT
GGCACGACCCGCCCGGACGTTTTGGGTCCCCTCCTTGGCACCCCCGGCAT
GGGAGGAAGGGAAGGAGGGCGGGGTGGAGGGCGGGGTGGAGGGTTGGGGG
TGGGAGAATGGATGCCTTCCAGTCTTTGTCCGGGCTTGTCGCCGGAATTG
GGCGAAGGTGGAAGGGGTGTGGGAGGCGTGGAACGAGGACCTGGGGAACA
ATGCCTTGGAGTGGAAGGAGCTGTGGCGGGACGTGGGGGCGGAGGAAGGG
GAGGAGGGCGGGGTGGAGGAAGACCTGGGCATGGATCTGGGCTTGGAATT
GAAGGCCCCGGTGGCGGGGGAGAGCGGGCGGAAAGAGGAAGAGGACAGTT
TCCTCCTCTTCCCCTGCAGCTTGGAGGGGGCACAGGCAGAGACGGAGAAC
GTGTCGATGCCGTCCATGGGGGTGATGAGGGACGGGAGGGAGGACGTGAC
GGAGGGCGTGACGGAGGGCGGGCTCCCGGAGCACCGGGGCGCACCAGTCG
TGTTCGCGCCCGTGCCCGATCCGAACGGTGATTTCCCCCCCTTGGGCTAT
GGACAGACGCGTCCTTTCCCCTCCCTCGTTCCCTCCACGGACCCGTCCTC
TCTCTCCTTCTCCTCGACGCCCACCCGGTCCGTGACCGTGGCGCCCCCTC
CGGGAGACGTCTTCTTCTCCGTGTCGGTGGAAGGGGAGGACGGGAAGGAG
GACGGGAGGGAGGACAGGAGGGAGGACGGGAGGGAAGGGGCGGTGTTCCA
GGAAGGGGCGTTGAAGCCCTGGGTGAAACAAGAGGAAATGCGAGAAGAGA
GGGAGGAGGAGGCGACTGAGGTGGTTTCCGCTGGGACCAGCGCGGCTGCT
ACGGTGGAGGGGGGTGAGGGAGGGACGGAGGAGGTGTGGGAAGACGGGGA
GGAAGGCAGAATGATGATGGATTTGGGCCTCAACATGGGTGACGCTACCC
TGCAGGCCTTCATGGCGGGGGTTGGGGGGGGAATGGAGGGAGGAAAAGAG
GGAGGGAAAGGGGGGGTGGGAGGACGGGAGGGCATGACGGGCGAGGTAAA
CACGAGTGGGCGAGGTATGGGAGAAGGCGGATGCGGCTTGGTGGATGAAA
GCTTTTATTTCGCATACCCTGGACCGCAATCAGAGGTCGGTAGTAACGGC
GAAGTGCCGCCGTTGCCGGTCTCGGAGAATCTGTTTTGAGACACGGAAGG
CGAACAAGGACAGGCACGGTGGAGTAGGCGAGGGAAAGGAAGAAGACAAG
GGGGTTCGAGGGGAGGGAGGTGTCTTGTGGAGGTGGAGGGAAGGGCTGAA
GGGGCGGAAGACGGCTCAGGGCCGAGGGGGGGGGGCGGTCGCGGGAGAAG
AGGGGCGGAGGCTGGAACGGGAGGAATTTCGATGGAGTATCCTCATAGAG
GAAAGGTTGTGAGATTAAGACAATGAAGCTGGCTTAGACACGCAAAAGAG
AGGAGAAACGGGAGTCTTGGGGGCGATGAACTTGCGCCTAAGAGGACCCC
TGGGCCCATGGAAACACACAATTTCACGGTACATACATGCACAAAAAGAG
AAATAGAGACAAGTGGTAGCATTGATTGAAAAGAGAAAGGGCGGGTGAGC
AAGGATCGTCCGTGTAGAAAATCGAAGAGGAGCGTTGAGAAGCGCCCGAA
TGAAGACCGCAGGGACACGAAGGGTGAGCAGCTGTACAAAAGCAGAGACA
GAGAAGAAGGCCTTGGAGGGGATGAAATGATATAAAGCGTATAAATGTAG
GAATGAGAGAGGGAAAGATAAGACTGCTTTCTTTGGTTTTTGCAATGTCT
TATCCCGCGAGATTGAAAGAGGCAGTTTGACGGGCGGAAGAAGTGAATTT
TCACATATTGCGGGGGAAAAACACCCTCCAAACTTCTAAACCTTGATGCG
TTTACATAATTGAAGGGAAGCAAGAATTGTTTCAACATGTGAAAAAAGAG
AGAGGACGCGACCGAAAGGTTGTCACGCGCGCTTTTGGAAAGGAAAAGTG
AGGACTTTCTCCACAGTTCTGGCACCGCTTGTT back to topCoding sequence (CDS) from alignment at CM002468.1:187352..192184- >rna6293 ID=rna6293|Name=rna6293|organism=Nannochloropsis gaditana|type=CDS|length=2301bp|location=Sequence derived from alignment at CM002468.1:187352..192184- (Nannochloropsis gaditana)
ATGGTCTCTGCAACGCGGCGCCATCGGCGGTACGGAGGTTACGGCGGAGG
CAGTGGGGGGCGGGGGAAGGGCACAGGGCGGGGGGGTGCCCACGCTGTGG
GCCAGCAGGGCGTGGACGAGACGCTTTTGCGCAAGTACCACCAGGCGGCG
GACCTGATCGCGCCGGTGGAACGGGACGAGGAGAAGCGGAACGTGCACCG
GGTGCGGGAGTACTGGCTCGAGCACGAGGCGATCAAGCACTTGGCCACCC
TGCAAGCCCTGCAGATTCCCGTGGCCACGTTTGAATCCCACTTCTTGCAG
GCGAACGCCCACAACCCCAAGTATGTCCGAGGGACGTTACGGGAAACGGT
TCGCACCTTCTTCCGAGAATTCACCGACGAGGCCGGCGTCCGGGTCTTGA
CGCTGAAATTGTCGGAAAGGATGGTGTACTCGAAACCCAGCAAGAATATT
TTGAAACGCTGGAATCTGAGCAACGGCATGCTGTACTTCTTCTACGCGGC
GGTGGGTCGGTCGGCACCGCCGACAGGGGACGAAATCCTGGAGCCTTTTT
ATTTCCAAAAGCGCGTGGACTTTATCCGCAAAGTGTGCGGTGGTGGGGAA
GGCGCGGGGAGTGACGTGGGACTGGCGTTGTCCCTTCCCCCGGCCCTACG
GCCTGCGGGCGAACGAGGGCAGGGCGAGGCGGTGGGCGGGGGAGAGGGGC
TGACAGAGGCAGGGGTAGGAACGGCAGCCACCGCCGCGGGAGGGTTGGGA
GGCAGGGGAGAACGGCACCGCGCGGGTTCACACGACTTTTTCTACCAGCA
AGAGCAACTGCAGCAAGCGGGCAGATCCAGGAAACGCCGCCGGGAAGGGG
GAGGGGCGCCTCTACCCCTGTCGGAGCTCTATGTCCCCGCCGACCCGGTC
AGTGCCTCCGTGGAGAAGGCGGGCGTGAAGGAGGAAGCCCCGGTTGAAGT
GGAGGATGGAGACGAGGAGGCAGTGCACCTGTTGCTAAGCTTTTTGAAAG
AGCGAGTTTGGGCGGGCGTGGAGGAGAAAGCCGTGCGGGACGCCGTATCG
GCGGGGGTGTGGCGCTTGGTGGCCGAAGAAAGCCTGGAGGCGGATCCCTC
CCTTGCTTACCTGGCACGACCCGCCCGGACGTTTTGGGTCCCCTCCTTGG
CACCCCCGGCATGGGAGGAAGGGAAGGAGGGCGGGGTGGAGGGCGGGGTG
GAGGGTTGGGGGTGGGAGAATGGATGCCTTCCAGTCTTTGTCCGGGCTTG
TCGCCGGAATTGGGCGAAGGTGGAAGGGGTGTGGGAGGCGTGGAACGAGG
ACCTGGGGAACAATGCCTTGGAGTGGAAGGAGCTGTGGCGGGACGTGGGG
GCGGAGGAAGGGGAGGAGGGCGGGGTGGAGGAAGACCTGGGCATGGATCT
GGGCTTGGAATTGAAGGCCCCGGTGGCGGGGGAGAGCGGGCGGAAAGAGG
AAGAGGACAGTTTCCTCCTCTTCCCCTGCAGCTTGGAGGGGGCACAGGCA
GAGACGGAGAACGTGTCGATGCCGTCCATGGGGGTGATGAGGGACGGGAG
GGAGGACGTGACGGAGGGCGTGACGGAGGGCGGGCTCCCGGAGCACCGGG
GCGCACCAGTCGTGTTCGCGCCCGTGCCCGATCCGAACGGTGATTTCCCC
CCCTTGGGCTATGGACAGACGCGTCCTTTCCCCTCCCTCGTTCCCTCCAC
GGACCCGTCCTCTCTCTCCTTCTCCTCGACGCCCACCCGGTCCGTGACCG
TGGCGCCCCCTCCGGGAGACGTCTTCTTCTCCGTGTCGGTGGAAGGGGAG
GACGGGAAGGAGGACGGGAGGGAGGACAGGAGGGAGGACGGGAGGGAAGG
GGCGGTGTTCCAGGAAGGGGCGTTGAAGCCCTGGGTGAAACAAGAGGAAA
TGCGAGAAGAGAGGGAGGAGGAGGCGACTGAGGTGGTTTCCGCTGGGACC
AGCGCGGCTGCTACGGTGGAGGGGGGTGAGGGAGGGACGGAGGAGGTGTG
GGAAGACGGGGAGGAAGGCAGAATGATGATGGATTTGGGCCTCAACATGG
GTGACGCTACCCTGCAGGCCTTCATGGCGGGGGTTGGGGGGGGAATGGAG
GGAGGAAAAGAGGGAGGGAAAGGGGGGGTGGGAGGACGGGAGGGCATGAC
GGGCGAGGTAAACACGAGTGGGCGAGGTATGGGAGAAGGCGGATGCGGCT
TGGTGGATGAAAGCTTTTATTTCGCATACCCTGGACCGCAATCAGAGGTC
GGTAGTAACGGCGAAGTGCCGCCGTTGCCGGTCTCGGAGAATCTGTTTTG
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