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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100283g7.8477.mrna |
| Orig protein id | gnl|cribi|Naga_100283g7.8477 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:182076..183745 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6291 ID=rna6291|Name=rna6291|organism=Nannochloropsis gaditana|type=mRNA|length=333bp
ATGTATCTTTGGGGGAGAGGTGCTTCCGCAGATATCCCTTCATCTCCATC
TTCCTCGTCCTCTTTGTCCTCCACGTGGGATGAAGAAGACCTGAGATCGC
GTTATACCCTAGAATACTGGGAAGAATTGTATGGGCGATTGCGTCACGCC
AGGGACCCCAGAAGTTTTGATCAGGAGGAGGTGGTCAGAATCGTGCGCCT
CATCGCTCAGTTATTGATGCTGGGCGAGGGGATGGAGGACGAAAGGATGT
TCGAATTCTTCGGGCAGAGAAATTTGCTGCCAGCGTTTTGTCAAATGACA
CGCTGCACTATCTGCTCTCTCAAAACTGCCTGA back to topprotein sequence of rna6291 >rna6291-protein ID=rna6291-protein|Name=rna6291|organism=Nannochloropsis gaditana|type=polypeptide|length=299bp
MPPSSTSCSSRGNTFGSKKREEVPERRRSASPSLSTEASFSSLTPDGEAL
KPMDSVPLPPYSAVSLLRLNPPFPVRLIAPSHPPFLSFFLRGKKGRRPLS
STPSAASADKLSPHCLPAPPLSLPPSLPSTRYLSALPLQHVDVALVSQQP
RHLTVVTWIDPALPPFLPPPSLVSSSAAASTIPLWRLRRLLPPSTPSSTG
SSSTYLACPSPRRMSRGMDEEGGEVVQRVLDLEFENMSDCQRAKHRVESA
RLQSRRETREKVRVWLECYAMVDKEGGVGRREGTRNGKGEGGALRGGIK back to topmRNA from alignment at CM002468.1:182076..183745+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6291 ID=rna6291|Name=rna6291|organism=Nannochloropsis gaditana|type=mRNA|length=1670bp|location=Sequence derived from alignment at CM002468.1:182076..183745+ (Nannochloropsis gaditana)
aggagggagggaagaagagcaacTTGAAATCTTCCCTTGTCGCCTGCTAC
CGGAGTGGCAAAAGCCATTTCCTCGACCgtattcctccccctcctcctcc
tctacctcactaccctccctccctccctcctcccgctcctcttcgcctcc
ctccttcttccacctgccacccttcccttcccccctggaagagcatgcct
ccctcctccacctcttgcaGCAGCAGAGGAAACACCTTCGGCagcaaaaa
gagagaggaagtcccggagaggaggagaagtgcATCGCCCTCCTTATCGA
CGGaggcttccttttcctccttgacgccGGACGGTGAGGCACTAAAGCCA
ATGGATTCggtgcccctccccccctacagCGCCGTATCATTACTACGTTT
aaatcctcccttccctgtccgTCTTatcgctccctctcaccctcctttcc
tttccttctttcttcgagggaaaaaaggccgtcgtcctctttcctccaca
cCGAGTGCTGCAAGTGCTGACAAACTGTCTCCCCACtgtcttcccgcccc
ccctctctcccttcctccctccctccctagtACCCGCTACCTgtccgcct
tgcccttgcaGCACGTGGATGTCGCTCTCGTCTCGCAACAGCCTCGTCAT
CTTACCGTCGTCACCTGGATCgaccctgccctccctcccttcctccctcc
tcccagccttgtttcctcctccgccgccgcctcgacCATCCCATTGTGgc
gccttcgccgcctcctccctccctccaccccttcctccaccggttcctct
tccacttaCCTcgcttgcccttccccccgaagGATGAGCAGGGggatgga
tgaggaaggaggggaggttgtgcAACGCGTCCTCGACCTAGAATTTGAAA
ATATGTCCGATTGtcaggtgagggggagggaagagcgaAAGGAAGGTAGc
agtggcgggagggagggagcatggcCAGAGAGAAATGCCGCCGGGTATGG
CAAAACCAGGGGGgaatgccctccctcgatttTTTTAAGAATCCTTGTGG
CTTTTACTCGTTCGTGTCCGCTCCTTTTTTCTAGGGTCCCTCTTTCTCAC
ATTTGgttgctttttcttgtccCTCTGggattcctcctcctcctccgtct
ccttgccctctcctttccttttctcctgctcctcttccctcaccccTATT
TCCTctatcttcttcctcgcccttgcTATTTCATCCTTAGCGGGCAAAGC
ATCGAGTGGAAAGCGCGCGTCTTCAGAGCAGGCGGGAAACCCGGGAGAAA
GTACGCGTGTGGTTGGAGTGTTACGCAATGGTtgacaaagagggaggggt
ggggaggagagagggaacaAGGAatggcaagggggagggaggggccttGA
GAGGCGGAATAAAATAAATCGGAGCCATTTTGCTGCCATGTCTGGACAGT
CCAGCCGTTCCTTGAAGGCTCGGTGATCCTACATATATCATATTATCCCG
CTCCTGAGAACAGTGTTGCCAGAGCGCGATGGCCTCTTACTTGTGCCGAT
TTACAATTCTTTCTAAGCATCACATTGTGCGTCATTTTTTGACATGAATC
ATGTACAGATGATACATCAGTCAGGCTTGCGCTCTTAACTTCCCATGATG
AAGAATCATTCTCTTTTTGT back to topCoding sequence (CDS) from alignment at CM002468.1:182076..183745+ >rna6291 ID=rna6291|Name=rna6291|organism=Nannochloropsis gaditana|type=CDS|length=1800bp|location=Sequence derived from alignment at CM002468.1:182076..183745+ (Nannochloropsis gaditana)
atgcctccctcctccacctcttgcaGCAGCAGAGGAAACACCTTCGGCag
caaaaagagagaggaagtcccggagaggaggagaagtgcATCGCCCTCCT
TATCGACGGaggcttccttttcctccttgacgccGGACGGTGAGGCACTA
AAGCCAATGGATTCggtgcccctccccccctacagCGCCGTATCATTACT
ACGTTTaaatcctcccttccctgtccgTCTTatcgctccctctcaccctc
ctttcctttccttctttcttcgagggaaaaaaggccgtcgtcctctttcc
tccacacCGAGTGCTGCAAGTGCTGACAAACTGTCTCCCCACtgtcttcc
cgccccccctctctcccttcctccctccctccctagtACCCGCTACCTgt
ccgccttgcccttgcaGCACGTGGATGTCGCTCTCGTCTCGCAACAGCCT
CGTCATCTTACCGTCGTCACCTGGATCgaccctgccctccctcccttcct
ccctcctcccagccttgtttcctcctccgccgccgcctcgacCATCCCAT
TGTGgcgccttcgccgcctcctccctccctccaccccttcctccaccggt
tcctcttccacttaCCTcgcttgcccttccccccgaagGATGAGCAGGGg
gatggatgaggaaggaggggaggttgtgcAACGCGTCCTCGACCTAGAAT
TTGAAAATATGTCCGATTGtcagCGGGCAAAGCATCGAGTGGAAAGCGCG
CGTCTTCAGAGCAGGCGGGAAACCCGGGAGAAAGTACGCGTGTGGTTGGA
GTGTTACGCAATGGTtgacaaagagggaggggtggggaggagagagggaa
caAGGAatggcaagggggagggaggggccttGAGAGGCGGAATAAAATAA
atgcctccctcctccacctcttgcaGCAGCAGAGGAAACACCTTCGGCag
caaaaagagagaggaagtcccggagaggaggagaagtgcATCGCCCTCCT
TATCGACGGaggcttccttttcctccttgacgccGGACGGTGAGGCACTA
AAGCCAATGGATTCggtgcccctccccccctacagCGCCGTATCATTACT
ACGTTTaaatcctcccttccctgtccgTCTTatcgctccctctcaccctc
ctttcctttccttctttcttcgagggaaaaaaggccgtcgtcctctttcc
tccacacCGAGTGCTGCAAGTGCTGACAAACTGTCTCCCCACtgtcttcc
cgccccccctctctcccttcctccctccctccctagtACCCGCTACCTgt
ccgccttgcccttgcaGCACGTGGATGTCGCTCTCGTCTCGCAACAGCCT
CGTCATCTTACCGTCGTCACCTGGATCgaccctgccctccctcccttcct
ccctcctcccagccttgtttcctcctccgccgccgcctcgacCATCCCAT
TGTGgcgccttcgccgcctcctccctccctccaccccttcctccaccggt
tcctcttccacttaCCTcgcttgcccttccccccgaagGATGAGCAGGGg
gatggatgaggaaggaggggaggttgtgcAACGCGTCCTCGACCTAGAAT
TTGAAAATATGTCCGATTGtcagCGGGCAAAGCATCGAGTGGAAAGCGCG
CGTCTTCAGAGCAGGCGGGAAACCCGGGAGAAAGTACGCGTGTGGTTGGA
GTGTTACGCAATGGTtgacaaagagggaggggtggggaggagagagggaa
caAGGAatggcaagggggagggaggggccttGAGAGGCGGAATAAAATAA back to top
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