|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_102473g1.7178.mrna |
| Orig protein id | gnl|cribi|Naga_102473g1.7178 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:159977..160811 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6278 ID=rna6278|Name=rna6278|organism=Nannochloropsis gaditana|type=mRNA|length=231bp
ATGGGACACCGTGCGCCCTCCGTGGCCCTAAGCCTGGGGAAAGTCGGCGC
AATTCGAGCGTCAGCGCAAGGGTGTCTGGGGCATCCGAACCAACCTCCCC
TCGTTTCCTTTTGCCCTCACGTGCCCGGTACCTGTCAAAGCTCAACAATC
ATGCTTACGGGTTTGGTGGCTGACTATTCTTCGGATGAGGATGGGAAAGC
AAGTCTAGGTGCGTTTTTTTCCGCCTTCTGA back to topprotein sequence of rna6278 >rna6278-protein ID=rna6278-protein|Name=rna6278|organism=Nannochloropsis gaditana|type=polypeptide|length=261bp
QFGPQLAAPPPLPPPPFAPPSLPSSLPSSSPALPQSPPPPLLDSPLGDRE
GEREGGGEDGWEDIVRRAAGKQREAAVKEQKEEEKREEERRRRKEREERW
RRREEEEKEGGREGGSVWSALRGLPLPYALVGDEELGMSVMKIQREGLRY
DRWVREGGKEGGREGERSILDVLSGGGEDWRGGVRRKGGRRRRKGWIFGT
LTYRTGRRRRRKGGRTGPRAGGRAGIPCTRGWTRRGVGRRKQGKRERSRG
REGRRRICTET back to topmRNA from alignment at CM002468.1:159977..160811+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6278 ID=rna6278|Name=rna6278|organism=Nannochloropsis gaditana|type=mRNA|length=835bp|location=Sequence derived from alignment at CM002468.1:159977..160811+ (Nannochloropsis gaditana)
CAATTTGGGCCTCAGCTTgctgcccctccgcctcttccaccgcctccctt
cgcccctccctccctcccctcctccctcccttcctcctcccccgcatTGC
CCCaatcgccccctcccccgttgcTTGATTCTCCTCTTGGAGatcgggaa
ggggagagggaaggagggggggaggatggatggGAGGACATTGTGCGGAG
GGCCGCTGGCAAGCAGCGGGAAGCCGCCGTCAAGGagcaaaaggaggagg
agaagagggaagaagagcgaaggaggaggaaagagagggaggaacggtgg
aggaggagggaggaggaagagaaggagggagggagggagggcgggagcgt
gTGGTCGGCGCTGCGCGGCTTGCCCTTACCGTACGCCTTGGTGGGCGATG
AGGAGTTGGGAATGTCGGTGATGAAGATTCAGCGGGAGGGTCTTCGGTAC
GACCGttgggtgagggagggagggaaggagggggggagggagggggagag
gagcatcCTGGACGTGttgagtggaggaggagaggattggaggggggggg
tgaggaggaagggggggaggaggaggaggaagggatggattTTTGGAACG
CTTACATatcggacggggaggaggaggaggaggaagggggggaggacggg
gccgagggcgggagggagggcggggattCCATGTACGAGGGgttggacga
ggcggggggtcgggagaaggaagcaggggaagagggagcggtcaaggggg
agggaggggaggaggaggatctgtACGGAGACctgatggaggaagtggag
gagagcgaggggaggaaggaggaaggggagaaggc back to topCoding sequence (CDS) from alignment at CM002468.1:159977..160811+ >rna6278 ID=rna6278|Name=rna6278|organism=Nannochloropsis gaditana|type=CDS|length=786bp|location=Sequence derived from alignment at CM002468.1:159977..160811+ (Nannochloropsis gaditana)
CAATTTGGGCCTCAGCTTgctgcccctccgcctcttccaccgcctccctt
cgcccctccctccctcccctcctccctcccttcctcctcccccgcatTGC
CCCaatcgccccctcccccgttgcTTGATTCTCCTCTTGGAGatcgggaa
ggggagagggaaggagggggggaggatggatggGAGGACATTGTGCGGAG
GGCCGCTGGCAAGCAGCGGGAAGCCGCCGTCAAGGagcaaaaggaggagg
agaagagggaagaagagcgaaggaggaggaaagagagggaggaacggtgg
aggaggagggaggaggaagagaaggagggagggagggagggcgggagcgt
gTGGTCGGCGCTGCGCGGCTTGCCCTTACCGTACGCCTTGGTGGGCGATG
AGGAGTTGGGAATGTCGGTGATGAAGATTCAGCGGGAGGGTCTTCGGTAC
GACCGttgggtgagggagggagggaaggagggggggagggagggggagag
gagcatcCTGGACGTGttgagtggaggaggagaggattggaggggggggg
tgaggaggaagggggggaggaggaggaggaagggatggattTTTGGAACG
CTTACATatcggacggggaggaggaggaggaggaagggggggaggacggg
gccgagggcgggagggagggcggggattCCATGTACGAGGGgttggacga
ggcggggggtcgggagaaggaagcaggggaagagggagcggtcaaggggg
agggaggggaggaggaggatctgtACGGAGACctga back to top
|