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Properties
| Property Name | Value |
|---|
| Product | ser thr protein phosphatase family expressed |
| Orig transcript id | gnl|cribi|Naga_100397g4.9994.mrna |
| Orig protein id | gnl|cribi|Naga_100397g4.9994 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:126742..128796 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6265 ID=rna6265|Name=rna6265|organism=Nannochloropsis gaditana|type=mRNA|length=635bp
CGACGACTCTCCTGGTGCCCGAGGGGCAGCACACCACACTGGCTTCCGTC
GAACACACCTTTCGCGTTGTTACACAAACATCGCCCTCATAAGCATTTTT
AACCGCAGGCAGCAAGCAAGCAGACGTGTATCGGAATGCCCAGTAGTAGT
AATAAAGGCGCCCAAGCCGGAAATGGCGGTAGAAGTCGTGGTGAAAGCTC
ACGCCTTTCTCGGGACGTGGTCGACTTACAGGCCTCGACGACGGAGGCGG
CGGAGAATTTGATCGCGGAAGGCATCCCTGCGCGTATTTTGGAACTGCAC
GCCCTGCACCAGTCCCTTCGAACCGCCGGAAATGCCTCCGAAGCGACCGC
GGCCCGGATCAACACAGAGGGCTCCTCCCCTCCCTCTCACCCTTCCCCAG
AAAACCCACCCTCCCCTCCCGCACGCACGGGCGTGGGACCTGGTGGAGGG
GAGGAAAAGGAGGGAGTGGGAAAAGCAGAGGGAGTGGGGAAAGAAGGGGG
AGAAGGGGAAGAGGCAGGAAAGATCGACCACGTCAATGCAGAGGTCTTCG
CGCTTTTTCGCCGGGTCAAGGCGTTGGTTCTTCGGCTCGTGGAAGACTTG
GGGGTGTTAAGGTGAGGGAGGGGTGTTAAGGTGAG back to topprotein sequence of rna6265 >rna6265-protein ID=rna6265-protein|Name=rna6265|organism=Nannochloropsis gaditana|type=polypeptide|length=492bp
MKTIAVLSCAILALSGQPRAVNAQEYVAGMFSDFGMGIQQVHLAQGKDYS
TMVVSWLTAYEAPTIVRYGTKLRKLDMTATSTDVVQYTAFNTTSGYIHHV
PLRDLKPSTTYYYLIGETTNQDGSASIRYFTTLPKVGKRIKNFQLAVAAD
IGQSNDSLLTIDHLLQDPDPAMLLLAGDTSYADCDPQRWDTFFNFMQPFA
EQRPMMTLAGNHEIEFDNTTGVATAFQAYINRYRMPEVRPTEINCPFQPT
TCYPSVYTSCYDYGNSYYSFDAATVHVIMLNSYTSIDESTPQYNWLVKDL
ASVNRRKTPWVVVMTHSPMYNSNQAHQNESLAMQAAIEPLLMRYKVNIVI
AGHVHAYERTYPVYQNVVDYKDGITYIVAGAAASRWGHASKYISPIPSWS
AVRNGTQYGHGKMTFHNDRRMTWAWYRNLDGEKILRDEIKICNTAKGLPV
SCGKINAKRTKLSKFNPGRALAPDLHSTEPVEATTATKAVKA back to topmRNA from alignment at CM002468.1:126742..128796+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6265 ID=rna6265|Name=rna6265|organism=Nannochloropsis gaditana|type=mRNA|length=2055bp|location=Sequence derived from alignment at CM002468.1:126742..128796+ (Nannochloropsis gaditana)
ATGAAAACAATTGCTGTCCTTTCTTGTGCTATTCTAGCTCTCAGTGGGCA
GCCCAGAGCCGTCAACGCGCAAGAATATGTGGCTGGCATGTTCTCGGATT
TTGGCATGGGCATCCAGCAAGTCCATTTAGCCCAAGGGAAGGACTACTCT
ACCATGGTCGTGTCGTGGCTGACCGCTTATGAGGCCCCCACGATCGTTCG
CTATGGAACAAAGCTCAGGAAGCTTGATATGACTGCGACCTCGACGGACG
TGGTTCAGTACACCGCATTCAATACGACGAGTGGATACATTCACCACGTT
CCCCTCAGGGATCTCAAACCCTCCACGACCTACTACTACCTGATTGGAGA
GACTACCAACCAGGACGGCTCGGCCAGCATTCGCTACTTTACGACCCTGC
CAAAAGTAGGCAAGCGGATCAAGAACTTTCAGCTGGCTGTGGCTGCAGAC
ATTGGTCAGTCAAACGACTCTCTACTCACCATCGACCATCTCCTTCAGGA
CCCCGACCCAGCCATGCTCTTGCTTGCGGGTGATACGTCCTATGCCGACT
GCGACCCACAAAGGTGGGACACGTTCTTCAATTTCATGCAGGTAGGTGCT
ATATCGATACTctgggggaaaaggatgcgGGGAAGTAGACAACATTCGTT
GTCTTCCGGTGTCCACCCGTATTGAAAAGCTTCATGCATTGACAGtgatc
cttctccccgcatACAATGCGAAAATATTTTGGCGAGCAGCCCTTCGCAG
AGCAACGCCCCATGATGACGCTGGCAGGCAATCACGAGATTGAGTTTGAC
AACACGACTGGCGTGGCCACCGCCTTTCAGGCCTATATCAACCGGTACCG
CATGCCGGAAGTGCGTCCGACAGAGATCAATTGCCCCTTTCAGCCCACTA
CTTGTTATCCATCCGTGTATACTAGCTGCTACGATTATGGCAATTCCTAC
TACTCCTTCGATGCGGCTACGGTGCATGTCATCATGCTCAACAGCTATAC
CTCGATCGACGAGTCTACGCCCCAGTACAACTGGCTCGTCAAAGACTTGG
CCAGTGTCAATCGAAGGAAGACGCCctgggtggtggtgatgacCCACTCC
CCTATGTACAACAGCAATCAGGCCCACCAAAATGAGGTACGCATTACTAG
GGGATGGGTCGTCTAAGTGCTTTTCAAGCACCTTAGTGTGCGCATCTCTC
TCATATAGAGGATGCTAACCAGCCTTTACTATTATTATCCCTGTCTATAG
TCTCTCGCCATGCAGGCTGCCATCGAGCCTTTGTTGATGCGGTACAAGGT
CAACATCGTCATCGCCGGCCACGTGCATGCCTATGAACGCACCTATCCAG
TCTACCAGAACGTTGTTGATTACAAAGATGGCATCACCTACATCGTGGCA
GGCGCTGCGGCCAGCCGATGGGTGAGTCGATAAGTGCGATGAGGTGTcct
ggatgagggaggcgctCCAACAGAGTGCGACCGCGTcgtttgccctctcc
ttcatttaATCTCACCCTGATCCTCATCTCTCTCATCGTGTGTCTTCTCT
TTGGTGACTGTCAAACAGGGCCATGCTTCTAAATACATCAGCCCCATTCC
CTCTTGGAGCGCTGTGCGGAATGGGACGCAGTACGGTCACGGTACGTGCG
CTCCGAAGGGACCTATGTTGACACCGAGGTCGGAGGGGTAACCTAGTTTG
CATGTCAATAATCGTTTTGAGAAATGCGTGTCTTTAAGTGATTCTCTGAG
TCTCATGATTGTCCATTTTGCTCATTGATACACCTATGCTCTCCACCCGT
TGCTCAGGGAAGATGACCTTCCACAACGATCGACGCATGACGTGGGCCTG
GTACCGCAATCTCGACGGAGAAAAGATTCTTCGGGACGAGATCAAGATAT
GCAACACGGCCAAGGGTCTGCCTGTCAGCTGTGGCAAGATTAATGCCAAG
AGAACCAAGCTCAGCAAGTTCAACCCAGGACGCGCGCTGGCCCCGGACCT
GCATAGTACTGAGCCGGTGGAAGCTACCACGGCGACGAAAGCTGTCAAAG
CGTAG back to topCoding sequence (CDS) from alignment at CM002468.1:126742..128796+ >rna6265 ID=rna6265|Name=rna6265|organism=Nannochloropsis gaditana|type=CDS|length=7395bp|location=Sequence derived from alignment at CM002468.1:126742..128796+ (Nannochloropsis gaditana)
ATGAAAACAATTGCTGTCCTTTCTTGTGCTATTCTAGCTCTCAGTGGGCA
GCCCAGAGCCGTCAACGCGCAAGAATATGTGGCTGGCATGTTCTCGGATT
TTGGCATGGGCATCCAGCAAGTCCATTTAGCCCAAGGGAAGGACTACTCT
ACCATGGTCGTGTCGTGGCTGACCGCTTATGAGGCCCCCACGATCGTTCG
CTATGGAACAAAGCTCAGGAAGCTTGATATGACTGCGACCTCGACGGACG
TGGTTCAGTACACCGCATTCAATACGACGAGTGGATACATTCACCACGTT
CCCCTCAGGGATCTCAAACCCTCCACGACCTACTACTACCTGATTGGAGA
GACTACCAACCAGGACGGCTCGGCCAGCATTCGCTACTTTACGACCCTGC
CAAAAGTAGGCAAGCGGATCAAGAACTTTCAGCTGGCTGTGGCTGCAGAC
ATTGGTCAGTCAAACGACTCTCTACTCACCATCGACCATCTCCTTCAGGA
CCCCGACCCAGCCATGCTCTTGCTTGCGGGTGATACGTCCTATGCCGACT
GCGACCCACAAAGGTGGGACACGTTCTTCAATTTCATGCAGCCCTTCGCA
GAGCAACGCCCCATGATGACGCTGGCAGGCAATCACGAGATTGAGTTTGA
CAACACGACTGGCGTGGCCACCGCCTTTCAGGCCTATATCAACCGGTACC
GCATGCCGGAAGTGCGTCCGACAGAGATCAATTGCCCCTTTCAGCCCACT
ACTTGTTATCCATCCGTGTATACTAGCTGCTACGATTATGGCAATTCCTA
CTACTCCTTCGATGCGGCTACGGTGCATGTCATCATGCTCAACAGCTATA
CCTCGATCGACGAGTCTACGCCCCAGTACAACTGGCTCGTCAAAGACTTG
GCCAGTGTCAATCGAAGGAAGACGCCctgggtggtggtgatgacCCACTC
CCCTATGTACAACAGCAATCAGGCCCACCAAAATGAGTCTCTCGCCATGC
AGGCTGCCATCGAGCCTTTGTTGATGCGGTACAAGGTCAACATCGTCATC
GCCGGCCACGTGCATGCCTATGAACGCACCTATCCAGTCTACCAGAACGT
TGTTGATTACAAAGATGGCATCACCTACATCGTGGCAGGCGCTGCGGCCA
GCCGATGGGGCCATGCTTCTAAATACATCAGCCCCATTCCCTCTTGGAGC
GCTGTGCGGAATGGGACGCAGTACGGTCACGGGAAGATGACCTTCCACAA
CGATCGACGCATGACGTGGGCCTGGTACCGCAATCTCGACGGAGAAAAGA
TTCTTCGGGACGAGATCAAGATATGCAACACGGCCAAGGGTCTGCCTGTC
AGCTGTGGCAAGATTAATGCCAAGAGAACCAAGCTCAGCAAGTTCAACCC
AGGACGCGCGCTGGCCCCGGACCTGCATAGTACTGAGCCGGTGGAAGCTA
CCACGGCGACGAAAGCTGTCAAAGCGTAGATGAAAACAATTGCTGTCCTT
TCTTGTGCTATTCTAGCTCTCAGTGGGCAGCCCAGAGCCGTCAACGCGCA
AGAATATGTGGCTGGCATGTTCTCGGATTTTGGCATGGGCATCCAGCAAG
TCCATTTAGCCCAAGGGAAGGACTACTCTACCATGGTCGTGTCGTGGCTG
ACCGCTTATGAGGCCCCCACGATCGTTCGCTATGGAACAAAGCTCAGGAA
GCTTGATATGACTGCGACCTCGACGGACGTGGTTCAGTACACCGCATTCA
ATACGACGAGTGGATACATTCACCACGTTCCCCTCAGGGATCTCAAACCC
TCCACGACCTACTACTACCTGATTGGAGAGACTACCAACCAGGACGGCTC
GGCCAGCATTCGCTACTTTACGACCCTGCCAAAAGTAGGCAAGCGGATCA
AGAACTTTCAGCTGGCTGTGGCTGCAGACATTGGTCAGTCAAACGACTCT
CTACTCACCATCGACCATCTCCTTCAGGACCCCGACCCAGCCATGCTCTT
GCTTGCGGGTGATACGTCCTATGCCGACTGCGACCCACAAAGGTGGGACA
CGTTCTTCAATTTCATGCAGCCCTTCGCAGAGCAACGCCCCATGATGACG
CTGGCAGGCAATCACGAGATTGAGTTTGACAACACGACTGGCGTGGCCAC
CGCCTTTCAGGCCTATATCAACCGGTACCGCATGCCGGAAGTGCGTCCGA
CAGAGATCAATTGCCCCTTTCAGCCCACTACTTGTTATCCATCCGTGTAT
ACTAGCTGCTACGATTATGGCAATTCCTACTACTCCTTCGATGCGGCTAC
GGTGCATGTCATCATGCTCAACAGCTATACCTCGATCGACGAGTCTACGC
CCCAGTACAACTGGCTCGTCAAAGACTTGGCCAGTGTCAATCGAAGGAAG
ACGCCctgggtggtggtgatgacCCACTCCCCTATGTACAACAGCAATCA
GGCCCACCAAAATGAGTCTCTCGCCATGCAGGCTGCCATCGAGCCTTTGT
TGATGCGGTACAAGGTCAACATCGTCATCGCCGGCCACGTGCATGCCTAT
GAACGCACCTATCCAGTCTACCAGAACGTTGTTGATTACAAAGATGGCAT
CACCTACATCGTGGCAGGCGCTGCGGCCAGCCGATGGGGCCATGCTTCTA
AATACATCAGCCCCATTCCCTCTTGGAGCGCTGTGCGGAATGGGACGCAG
TACGGTCACGGGAAGATGACCTTCCACAACGATCGACGCATGACGTGGGC
CTGGTACCGCAATCTCGACGGAGAAAAGATTCTTCGGGACGAGATCAAGA
TATGCAACACGGCCAAGGGTCTGCCTGTCAGCTGTGGCAAGATTAATGCC
AAGAGAACCAAGCTCAGCAAGTTCAACCCAGGACGCGCGCTGGCCCCGGA
CCTGCATAGTACTGAGCCGGTGGAAGCTACCACGGCGACGAAAGCTGTCA
AAGCGTAGATGAAAACAATTGCTGTCCTTTCTTGTGCTATTCTAGCTCTC
AGTGGGCAGCCCAGAGCCGTCAACGCGCAAGAATATGTGGCTGGCATGTT
CTCGGATTTTGGCATGGGCATCCAGCAAGTCCATTTAGCCCAAGGGAAGG
ACTACTCTACCATGGTCGTGTCGTGGCTGACCGCTTATGAGGCCCCCACG
ATCGTTCGCTATGGAACAAAGCTCAGGAAGCTTGATATGACTGCGACCTC
GACGGACGTGGTTCAGTACACCGCATTCAATACGACGAGTGGATACATTC
ACCACGTTCCCCTCAGGGATCTCAAACCCTCCACGACCTACTACTACCTG
ATTGGAGAGACTACCAACCAGGACGGCTCGGCCAGCATTCGCTACTTTAC
GACCCTGCCAAAAGTAGGCAAGCGGATCAAGAACTTTCAGCTGGCTGTGG
CTGCAGACATTGGTCAGTCAAACGACTCTCTACTCACCATCGACCATCTC
CTTCAGGACCCCGACCCAGCCATGCTCTTGCTTGCGGGTGATACGTCCTA
TGCCGACTGCGACCCACAAAGGTGGGACACGTTCTTCAATTTCATGCAGC
CCTTCGCAGAGCAACGCCCCATGATGACGCTGGCAGGCAATCACGAGATT
GAGTTTGACAACACGACTGGCGTGGCCACCGCCTTTCAGGCCTATATCAA
CCGGTACCGCATGCCGGAAGTGCGTCCGACAGAGATCAATTGCCCCTTTC
AGCCCACTACTTGTTATCCATCCGTGTATACTAGCTGCTACGATTATGGC
AATTCCTACTACTCCTTCGATGCGGCTACGGTGCATGTCATCATGCTCAA
CAGCTATACCTCGATCGACGAGTCTACGCCCCAGTACAACTGGCTCGTCA
AAGACTTGGCCAGTGTCAATCGAAGGAAGACGCCctgggtggtggtgatg
acCCACTCCCCTATGTACAACAGCAATCAGGCCCACCAAAATGAGTCTCT
CGCCATGCAGGCTGCCATCGAGCCTTTGTTGATGCGGTACAAGGTCAACA
TCGTCATCGCCGGCCACGTGCATGCCTATGAACGCACCTATCCAGTCTAC
CAGAACGTTGTTGATTACAAAGATGGCATCACCTACATCGTGGCAGGCGC
TGCGGCCAGCCGATGGGGCCATGCTTCTAAATACATCAGCCCCATTCCCT
CTTGGAGCGCTGTGCGGAATGGGACGCAGTACGGTCACGGGAAGATGACC
TTCCACAACGATCGACGCATGACGTGGGCCTGGTACCGCAATCTCGACGG
AGAAAAGATTCTTCGGGACGAGATCAAGATATGCAACACGGCCAAGGGTC
TGCCTGTCAGCTGTGGCAAGATTAATGCCAAGAGAACCAAGCTCAGCAAG
TTCAACCCAGGACGCGCGCTGGCCCCGGACCTGCATAGTACTGAGCCGGT
GGAAGCTACCACGGCGACGAAAGCTGTCAAAGCGTAGATGAAAACAATTG
CTGTCCTTTCTTGTGCTATTCTAGCTCTCAGTGGGCAGCCCAGAGCCGTC
AACGCGCAAGAATATGTGGCTGGCATGTTCTCGGATTTTGGCATGGGCAT
CCAGCAAGTCCATTTAGCCCAAGGGAAGGACTACTCTACCATGGTCGTGT
CGTGGCTGACCGCTTATGAGGCCCCCACGATCGTTCGCTATGGAACAAAG
CTCAGGAAGCTTGATATGACTGCGACCTCGACGGACGTGGTTCAGTACAC
CGCATTCAATACGACGAGTGGATACATTCACCACGTTCCCCTCAGGGATC
TCAAACCCTCCACGACCTACTACTACCTGATTGGAGAGACTACCAACCAG
GACGGCTCGGCCAGCATTCGCTACTTTACGACCCTGCCAAAAGTAGGCAA
GCGGATCAAGAACTTTCAGCTGGCTGTGGCTGCAGACATTGGTCAGTCAA
ACGACTCTCTACTCACCATCGACCATCTCCTTCAGGACCCCGACCCAGCC
ATGCTCTTGCTTGCGGGTGATACGTCCTATGCCGACTGCGACCCACAAAG
GTGGGACACGTTCTTCAATTTCATGCAGCCCTTCGCAGAGCAACGCCCCA
TGATGACGCTGGCAGGCAATCACGAGATTGAGTTTGACAACACGACTGGC
GTGGCCACCGCCTTTCAGGCCTATATCAACCGGTACCGCATGCCGGAAGT
GCGTCCGACAGAGATCAATTGCCCCTTTCAGCCCACTACTTGTTATCCAT
CCGTGTATACTAGCTGCTACGATTATGGCAATTCCTACTACTCCTTCGAT
GCGGCTACGGTGCATGTCATCATGCTCAACAGCTATACCTCGATCGACGA
GTCTACGCCCCAGTACAACTGGCTCGTCAAAGACTTGGCCAGTGTCAATC
GAAGGAAGACGCCctgggtggtggtgatgacCCACTCCCCTATGTACAAC
AGCAATCAGGCCCACCAAAATGAGTCTCTCGCCATGCAGGCTGCCATCGA
GCCTTTGTTGATGCGGTACAAGGTCAACATCGTCATCGCCGGCCACGTGC
ATGCCTATGAACGCACCTATCCAGTCTACCAGAACGTTGTTGATTACAAA
GATGGCATCACCTACATCGTGGCAGGCGCTGCGGCCAGCCGATGGGGCCA
TGCTTCTAAATACATCAGCCCCATTCCCTCTTGGAGCGCTGTGCGGAATG
GGACGCAGTACGGTCACGGGAAGATGACCTTCCACAACGATCGACGCATG
ACGTGGGCCTGGTACCGCAATCTCGACGGAGAAAAGATTCTTCGGGACGA
GATCAAGATATGCAACACGGCCAAGGGTCTGCCTGTCAGCTGTGGCAAGA
TTAATGCCAAGAGAACCAAGCTCAGCAAGTTCAACCCAGGACGCGCGCTG
GCCCCGGACCTGCATAGTACTGAGCCGGTGGAAGCTACCACGGCGACGAA
AGCTGTCAAAGCGTAGATGAAAACAATTGCTGTCCTTTCTTGTGCTATTC
TAGCTCTCAGTGGGCAGCCCAGAGCCGTCAACGCGCAAGAATATGTGGCT
GGCATGTTCTCGGATTTTGGCATGGGCATCCAGCAAGTCCATTTAGCCCA
AGGGAAGGACTACTCTACCATGGTCGTGTCGTGGCTGACCGCTTATGAGG
CCCCCACGATCGTTCGCTATGGAACAAAGCTCAGGAAGCTTGATATGACT
GCGACCTCGACGGACGTGGTTCAGTACACCGCATTCAATACGACGAGTGG
ATACATTCACCACGTTCCCCTCAGGGATCTCAAACCCTCCACGACCTACT
ACTACCTGATTGGAGAGACTACCAACCAGGACGGCTCGGCCAGCATTCGC
TACTTTACGACCCTGCCAAAAGTAGGCAAGCGGATCAAGAACTTTCAGCT
GGCTGTGGCTGCAGACATTGGTCAGTCAAACGACTCTCTACTCACCATCG
ACCATCTCCTTCAGGACCCCGACCCAGCCATGCTCTTGCTTGCGGGTGAT
ACGTCCTATGCCGACTGCGACCCACAAAGGTGGGACACGTTCTTCAATTT
CATGCAGCCCTTCGCAGAGCAACGCCCCATGATGACGCTGGCAGGCAATC
ACGAGATTGAGTTTGACAACACGACTGGCGTGGCCACCGCCTTTCAGGCC
TATATCAACCGGTACCGCATGCCGGAAGTGCGTCCGACAGAGATCAATTG
CCCCTTTCAGCCCACTACTTGTTATCCATCCGTGTATACTAGCTGCTACG
ATTATGGCAATTCCTACTACTCCTTCGATGCGGCTACGGTGCATGTCATC
ATGCTCAACAGCTATACCTCGATCGACGAGTCTACGCCCCAGTACAACTG
GCTCGTCAAAGACTTGGCCAGTGTCAATCGAAGGAAGACGCCctgggtgg
tggtgatgacCCACTCCCCTATGTACAACAGCAATCAGGCCCACCAAAAT
GAGTCTCTCGCCATGCAGGCTGCCATCGAGCCTTTGTTGATGCGGTACAA
GGTCAACATCGTCATCGCCGGCCACGTGCATGCCTATGAACGCACCTATC
CAGTCTACCAGAACGTTGTTGATTACAAAGATGGCATCACCTACATCGTG
GCAGGCGCTGCGGCCAGCCGATGGGGCCATGCTTCTAAATACATCAGCCC
CATTCCCTCTTGGAGCGCTGTGCGGAATGGGACGCAGTACGGTCACGGGA
AGATGACCTTCCACAACGATCGACGCATGACGTGGGCCTGGTACCGCAAT
CTCGACGGAGAAAAGATTCTTCGGGACGAGATCAAGATATGCAACACGGC
CAAGGGTCTGCCTGTCAGCTGTGGCAAGATTAATGCCAAGAGAACCAAGC
TCAGCAAGTTCAACCCAGGACGCGCGCTGGCCCCGGACCTGCATAGTACT
GAGCCGGTGGAAGCTACCACGGCGACGAAAGCTGTCAAAGCGTAG back to top
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