rna6264, rna6264 (mRNA) Nannochloropsis gaditana

Overview
Namerna6264
Unique Namerna6264
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length729
Alignment locationCM002468.1:122943..124044 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101168g3.7370.mrna
Orig protein idgnl|cribi|Naga_101168g3.7370
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:122943..124044 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101168g3gene6057Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6264rna6264-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24425.1cds6249Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6264 ID=rna6264|Name=rna6264|organism=Nannochloropsis gaditana|type=mRNA|length=729bp
ATGGAGGAGACAACACGGTTTCACGAGGAACGCCTGCCAGAGTCTCCCCG
GCGGCAAGCACGTGATGGGGGCCGGCTACAATTACCGCACCAACAGCCGC
CACAGGAGCAAGGACTTGATCAACATCCACAAGTCGCGACACAGCAGCCA
GAGTACGGGGATGGGCTCCATGCTTTTTTGGGGGTCACCCGAGGGGCGGC
GGGCGGCTACCCTCTCTACAGCCTGAACCTCCCTTCCTCGCCTTCCTCCC
CCCCTTCCTCCCTCCTTCCCCCTTTCCTCCCCCCCCGGGCCTCCTCTCCC
CGCCCACCGGCCCCAGCGGCCCCGCTTCTCGCCTCCACCACCCGTCCCCC
TCACCGGACGCCCGAGAAGACCCCCTGTCGTTTCCATGCCCAGCCCGGCG
GATGTGCCTCGGGGCATCAGTGCAAATTCCTCCACCAAATCGAGCGGGAC
CAGGCAGGGGGAAGGAAGGGAGGGAGGGCGAGGGAAGGCGTGGAAGGACC
GGGACGACGCGGGCATGTGGCCTTGACCAAGACTCAAGCCTCTTTCTCTT
CCCCCAACCTGACCCTCCTACCGCTCTTGCCGTCCCCGCATCCCTCGGTA
ACGCCTTACCCTCGCCCCCCATTGCGTCAATCCCACCATTTTCAACCGGC
AGGGAATAGGGGCAACCGTGCTCCGCGCTCTGTCGCGGGGGAGGGAGGGA
TGGAGGGCGGGAGGGAGGGGGAGGGTTAG
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protein sequence of rna6264

>rna6264-protein ID=rna6264-protein|Name=rna6264|organism=Nannochloropsis gaditana|type=polypeptide|length=159bp
MPSSSNKGAQAGNGGRSRGESSRLSRDVVDLQASTTEAAENLIAEGIPAR
ILELHALHQSLRTAGNASEATAARINTEGSSPPSHPSPENPPSPPARTGV
GPGGGEEKEGVGKAEGVGKEGGEGEEAGKIDHVNAEVFALFRRVKALVLR
LVEDLGVLR
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mRNA from alignment at CM002468.1:122943..124044+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6264 ID=rna6264|Name=rna6264|organism=Nannochloropsis gaditana|type=mRNA|length=1102bp|location=Sequence derived from alignment at CM002468.1:122943..124044+ (Nannochloropsis gaditana)
CGACGACTCTCCTGGTGCCCGAGGGGCAGCACACCACACTGGCTTCCGTC
GAACACACCTTTCGCGTTGTTACACAAACATCGCCCTCATAAGCATTTTT
AACCGCAGGCAGCAAGCAAGCAGACGTGTATCGGAATGCCCAGTAGTAGT
AATAAAGGCGCCCAAGCCGGAAATGGCGGTAGAAGTCGTGGTGAAAGCTC
ACGCCTTTCTCGGGACGTGGTCGACTTACAggtaaaggagggggggggtt
gaaaAGCAAATGGATGGCAACATCCTGCAAAAAAGACATCGTTCACGGAG
GTATGGGTGTGAATGGCACCCAAACCACGTCGTGGTATCGggcaggaaga
aaaattgtGTTCATGACAGCGGCAGATTTACAAGGGAGGGCCTGTATGTA
AGCATGTCGCCATGGACCAGATTTTCTTCCCATTTGCTcaccttcccacc
ttccccttcgtctcctccctctctcccccaggcctcgacgacggaggcgg
cggagaatTTGATCGCGGAAGGCATCCCTGCGCGTATTTTGGAACTGCAC
GCCCTGCACCAGgtgaggggaaagggtgaggaggttagaAGGCACTCATT
CGCACTGTATATATGCGAGGCTATCTTGACACTTCTTCTTTTGTGTACAT
GTTTTCCTTTTGCCGTGCCGAGAccgtttccccccttccaacattttctc
ctctctcccctgttttcccctttcctttctcctcccatcccctcaCCTTG
CCCtattgttccctccctccccctcacagTCCCTTCGAACCGCCGGAAAT
GCCTCCGAAGCGACCGCGGCCCGGATCAACACAGAgggctcctcccctcc
ctctcacccttccCCAGAAaacccaccctcccctcccgcacGCACGGGCG
Tgggacctggtggaggggaggaaaaggagggagtgggaaaagcagaggga
gtggggaaagaagggggagaaggggaagaggcaggaaagaTCGACCACGT
CAATGCAGAGGTCTTCGCGCTTTTTCGCCGGGTCAAGGCGTTGGTTCTTC
GGCTCGTGGAAGACTTGGGGGTGTtaaggtgagggaggggtgttaaggtg
ag
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Coding sequence (CDS) from alignment at CM002468.1:122943..124044+

>rna6264 ID=rna6264|Name=rna6264|organism=Nannochloropsis gaditana|type=CDS|length=1440bp|location=Sequence derived from alignment at CM002468.1:122943..124044+ (Nannochloropsis gaditana)
ATGCCCAGTAGTAGTAATAAAGGCGCCCAAGCCGGAAATGGCGGTAGAAG
TCGTGGTGAAAGCTCACGCCTTTCTCGGGACGTGGTCGACTTACAggcct
cgacgacggaggcggcggagaatTTGATCGCGGAAGGCATCCCTGCGCGT
ATTTTGGAACTGCACGCCCTGCACCAGTCCCTTCGAACCGCCGGAAATGC
CTCCGAAGCGACCGCGGCCCGGATCAACACAGAgggctcctcccctccct
ctcacccttccCCAGAAaacccaccctcccctcccgcacGCACGGGCGTg
ggacctggtggaggggaggaaaaggagggagtgggaaaagcagagggagt
ggggaaagaagggggagaaggggaagaggcaggaaagaTCGACCACGTCA
ATGCAGAGGTCTTCGCGCTTTTTCGCCGGGTCAAGGCGTTGGTTCTTCGG
CTCGTGGAAGACTTGGGGGTGTtaaggtgaATGCCCAGTAGTAGTAATAA
AGGCGCCCAAGCCGGAAATGGCGGTAGAAGTCGTGGTGAAAGCTCACGCC
TTTCTCGGGACGTGGTCGACTTACAggcctcgacgacggaggcggcggag
aatTTGATCGCGGAAGGCATCCCTGCGCGTATTTTGGAACTGCACGCCCT
GCACCAGTCCCTTCGAACCGCCGGAAATGCCTCCGAAGCGACCGCGGCCC
GGATCAACACAGAgggctcctcccctccctctcacccttccCCAGAAaac
ccaccctcccctcccgcacGCACGGGCGTgggacctggtggaggggagga
aaaggagggagtgggaaaagcagagggagtggggaaagaagggggagaag
gggaagaggcaggaaagaTCGACCACGTCAATGCAGAGGTCTTCGCGCTT
TTTCGCCGGGTCAAGGCGTTGGTTCTTCGGCTCGTGGAAGACTTGGGGGT
GTtaaggtgaATGCCCAGTAGTAGTAATAAAGGCGCCCAAGCCGGAAATG
GCGGTAGAAGTCGTGGTGAAAGCTCACGCCTTTCTCGGGACGTGGTCGAC
TTACAggcctcgacgacggaggcggcggagaatTTGATCGCGGAAGGCAT
CCCTGCGCGTATTTTGGAACTGCACGCCCTGCACCAGTCCCTTCGAACCG
CCGGAAATGCCTCCGAAGCGACCGCGGCCCGGATCAACACAGAgggctcc
tcccctccctctcacccttccCCAGAAaacccaccctcccctcccgcacG
CACGGGCGTgggacctggtggaggggaggaaaaggagggagtgggaaaag
cagagggagtggggaaagaagggggagaaggggaagaggcaggaaagaTC
GACCACGTCAATGCAGAGGTCTTCGCGCTTTTTCGCCGGGTCAAGGCGTT
GGTTCTTCGGCTCGTGGAAGACTTGGGGGTGTtaaggtga
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Synonyms
Publications