rna622, rna622 (mRNA) Nannochloropsis gaditana

Overview
Namerna622
Unique Namerna622
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2245
Alignment locationCM002456.1:16068..17012 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100225g5.3529.mrna
Orig protein idgnl|cribi|Naga_100225g5.3529
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:16068..17012 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100225g5gene598Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna622rna622-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM30051.1cds622Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna622 ID=rna622|Name=rna622|organism=Nannochloropsis gaditana|type=mRNA|length=2245bp
CCACAAAAGTTATACAGATAGGCCAAAAGAGTCCCCATCATCAATGTTAC
GCATAAACCCGACGTTGGGTCGGCGCCTGCTGGCTAGGACCACGCAAAAA
GAAGTCTCCTGCATGCGCACGGCCTCCTATTTGTTGAACTCCCTTACCCC
CCCGGGCCGGACTCCATGTCCTCACGCGTGCAGCCAACCTTATCCCGTCA
GCTTCCGACCCCCACCCGCCCTCGAGTCGCTTCGATTTTTTTCTTCAAAA
CCGGCGAACCCTCCTGCAGCAGAAGCACACGAATTTCAGGCAGAGACACG
CCAATTATTGGACATTGTCATTCACAGCGTCTATACTGACAAGGAGGTGT
TTCTGCGAGAACTAATCTCCAATGCTTCGGACGCGCTAGAAAAGCTGAGG
CACATCCAAGTCACAGGAGAAGCGACCGTCGCAGACGCATCTTTGCCATT
AGAGATAAATATTACCACGGACGAGGAGAAGGGGACTCTGACGCTCCGAG
ATACAGGCCTGGGGATGACGAAGACGGAATTGGTCTCCAACCTGGGCACG
ATCGCGCGCTCAGGCTCGAAGGCCTTTGTCAAGGAGCTGAAGGAAAAAGC
CGGGGAGGGGTCGGCAGACGCGGCGGGCATCATCGGCCAGTTTGGCGTGG
GTTTCTACAGCGCCTTCATGGTGGGCGACAGCGTGGAGGTGACCTCCCGC
TCGTACAGCCTCGAGGAGCCCGGGCACACGTGGAAGAGCACGGGCTCGGG
GTCCTACGAGATCGGGCCTGTAGAAGGGGAGGCGGAGGAGCGAGGGTCCC
GGATCACCATCCATCTGAAGGACGACTGCAAGGAGTTCTCGAAGCCCGCG
CGGGTCAAGGAGATCATTAAGAAGTACTCCAATTTTGTCAACTTTCCCAT
TAAGGTTAACGGTGAAGTCTGTAACACGGTGCGTGCCTTGTGGACCGAGG
ACAAGAGCGGCATATCGGAAGAGCAATACAAGGAGTTCTACCGATTTATC
GCCAACGCCTACGACGACCCCTGCTACCGGCTTCACTTCCGTACAGACGC
GCCCCTGGATCTGAAGGTGCTCTTCTTCATTCCTTCCTTCCACGGGGAGA
AGTTCGGCATGGGGCGATTGGAGCCGGGCGTGAGTTTATACAGTCGCAAG
GTCCTGATCGAGTCCAAATGCGGACGTATCTTACCAGACTGGATGCGCTT
TGTCAAGGGCGTGGTGGACTCCGAGGATCTGCCCCTTAGCATCTCCCGGG
AGAAAGCCCAGGACACTGCTCTGCTCAAGCGCATCGAGCGGGTACTGGTG
CGGAAGGTGCTGAAGCAGCTGGAAGACGAGGCGCGGAAGGATCCTGAGAA
GTACAAGGAGAAATTTTTCAAAGAATTTGGATATTTTCTCAAGGAAGGTA
TCTGCCACGATTTTGAAAACGCGTCTCGCATTGCCAAATTGCTCTACTAC
GAGTCTTCCCGTCTGCCTTCCGGGGAGACTACCTCCTTCGATGAGTACAT
CTCTCGTTGCGACCCCGAGCAAAATGCCATCTACTTCCTCTGTGCGCCTA
ATCGGGAGCTGGCTGAGGCCTCACCGTATTTTGAAGCATTCAAACGCAGC
AACAAAGAGGTCATCTTTGTGTACAATGCTATCGACGACTTTGTAATGAA
CAATCTCAAGACTTACCACGGCCGCGATTTTAAAACGGCTGAGGCAACGG
GGCTAGATTTGGGTCCAGGAAAAAAGGAGGGGGAAGAAGACGCGAAAGAC
AAAGCAGAGGAGTCCTCCGCGCCTACCCCTCTGACCGAGGCGGAGGTGGA
GGATCTTGGCAAGTGGCTTGTGTCCACCCTACCAAACAAGCTTCAGGACG
CCAAGGCTACTTCGAGGCTCTACGACTCACCCGCTATTGTCACCGACCAC
GAGTCAGGAGCGCTGCGGAGAATGATGCGGATGGTGGAGCAGCAATCCAT
GGGCCAGGCCTCTTTCATACCCAAGCAGCACTTGGAGCTGAATCCCCGGC
ACCCGATTATCATCCGCTTGCACAGTCTTCGAACCGAGGATGCTGAGCTG
GCAAAGGTGGTGGCCGAGCAAATCTTTGACAACGCCATGGTAGCCGCGGG
TCTGTTGGATGACTCGCGCGTGATGCTTCCTCGACTGAACAAACTGATGG
AGCGACTAGTCCAATCGGCGAACAAACACAGACATAAGGCAGGTTTTTCC
TTGATTGGATCTTTTAGGTGCAGGCTAACGGCGGTTGCGATTTGA
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protein sequence of rna622

>rna622-protein ID=rna622-protein|Name=rna622|organism=Nannochloropsis gaditana|type=polypeptide|length=297bp
MRTEATMEADECETRQRYHHAAMPASATFGSQLGLSAEKGGMIEEDEELH
RLEQHMEGIGKNSKDSDTSFFQKARQTTLEGLAALKRSISGSREKEREER
EEMCRKEVVFGERGYGTCPSSELEQDMHRMMQAAVDVLKEPTESPTRNTT
RLHAPELYHPESVTSYEELRKRNATGKEMEGESDIDATTQQVVSKMFDAS
GEETKPEGLEVEEKENQSVIDSLGSKATGIVEKMGAMTQSTQDIKDNNEE
DQEDDALEMMQIRKGCICACICVGKRYLIMRVPGIHPRKLRKQVMLK
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mRNA from alignment at CM002456.1:16068..17012-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna622 ID=rna622|Name=rna622|organism=Nannochloropsis gaditana|type=mRNA|length=945bp|location=Sequence derived from alignment at CM002456.1:16068..17012- (Nannochloropsis gaditana)
ATGCGCACAGAGGCTACGATGGAAGCAGATGAATGTGAGACCCGACAACG
GTATCATCACGCGGCAATGCCCGCGAGTGCTACTTTTGGGTCTCAACTGG
GGCTAAGTGCTGAGAAGGGAGGTATGATAGAAGAGGATGAAGAGCTGCAT
CGGCTGGAACAACACATGGAGGGAATTGGCAAAAACTCAAAAGATTCTGA
TACGAGCTTCTTTCAAAAAGCTCGGCAGACCACATTGGAGGGTTTAGCGG
CTCTGAAGCGCTCCATTAGTGGCAGCCGGGAGAAGGAGAGGGAGGAGAGG
GAGGAAATGTGCCGTAAGGAGGTAGTTTTTGGAGAGAGGGGTTACGGAAC
TTGTCCGTCCTCCGAGCTTGAGCAAGACATGCATCGCATGATGCAGGCAG
CTGTTGACGTTTTGAAGGAACCGACTGAGAGTCCCACGCGTAATACTACT
CGTTTGCATGCACCTGAGCTTTACCACCCGGAATCGGTGACTAGCTACGA
AGAATTGAGGAAACGGAATGCGACAGGTAAGGAAATGGAAGGAGAGTCAG
ATATAGACGCCACCACGCAACAAGTCGTGTCGAAGATGTTTGATGCAAGT
GGTGAAGAGACAAAGCCAGAAGGTCTCGAGGTCGAGGAGAAGGAAAACCA
GTCTGTCATCGACAGCCTGGGAAGCAAAGCCACAGGAATCGTCGAAAAGA
TGGGAGCTATGACACAAAGTACACAAGACATCAAAGACAACAACGAAGAG
GATCAAGAAGATGATGCCCTGGAAATGATGCAGATGTTCACGCCGGAGTA
ATTCGGTTTGACGTGTAATAAAAACGGGGATGAAAGACGGAAGGGATGCA
TATGTGCGTGCATTTGCGTAGGTAAGAGGTACTTAATAATGAGGGTCCCG
GGTATTCATCCAAGAAAACTTCGGAAACAAGTTATGTTGAAATAG
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Coding sequence (CDS) from alignment at CM002456.1:16068..17012-

>rna622 ID=rna622|Name=rna622|organism=Nannochloropsis gaditana|type=CDS|length=1788bp|location=Sequence derived from alignment at CM002456.1:16068..17012- (Nannochloropsis gaditana)
ACGGAAGGGATGCATATGTGCGTGCATTTGCGTAGGTAAGAGGTACTTAA
TAATGAGGGTCCCGGGTATTCATCCAAGAAAACTTCGGAAACAAGTTATG
TTGAAATAGATGCGCACAGAGGCTACGATGGAAGCAGATGAATGTGAGAC
CCGACAACGGTATCATCACGCGGCAATGCCCGCGAGTGCTACTTTTGGGT
CTCAACTGGGGCTAAGTGCTGAGAAGGGAGGTATGATAGAAGAGGATGAA
GAGCTGCATCGGCTGGAACAACACATGGAGGGAATTGGCAAAAACTCAAA
AGATTCTGATACGAGCTTCTTTCAAAAAGCTCGGCAGACCACATTGGAGG
GTTTAGCGGCTCTGAAGCGCTCCATTAGTGGCAGCCGGGAGAAGGAGAGG
GAGGAGAGGGAGGAAATGTGCCGTAAGGAGGTAGTTTTTGGAGAGAGGGG
TTACGGAACTTGTCCGTCCTCCGAGCTTGAGCAAGACATGCATCGCATGA
TGCAGGCAGCTGTTGACGTTTTGAAGGAACCGACTGAGAGTCCCACGCGT
AATACTACTCGTTTGCATGCACCTGAGCTTTACCACCCGGAATCGGTGAC
TAGCTACGAAGAATTGAGGAAACGGAATGCGACAGGTAAGGAAATGGAAG
GAGAGTCAGATATAGACGCCACCACGCAACAAGTCGTGTCGAAGATGTTT
GATGCAAGTGGTGAAGAGACAAAGCCAGAAGGTCTCGAGGTCGAGGAGAA
GGAAAACCAGTCTGTCATCGACAGCCTGGGAAGCAAAGCCACAGGAATCG
TCGAAAAGATGGGAGCTATGACACAAAGTACACAAGACATCAAAGACAAC
AACGAAGAGGATCAAGAAGATGATGCCCTGGAAATGATGCAGATACGGAA
GGGATGCATATGTGCGTGCATTTGCGTAGGTAAGAGGTACTTAATAATGA
GGGTCCCGGGTATTCATCCAAGAAAACTTCGGAAACAAGTTATGTTGAAA
TAGATGCGCACAGAGGCTACGATGGAAGCAGATGAATGTGAGACCCGACA
ACGGTATCATCACGCGGCAATGCCCGCGAGTGCTACTTTTGGGTCTCAAC
TGGGGCTAAGTGCTGAGAAGGGAGGTATGATAGAAGAGGATGAAGAGCTG
CATCGGCTGGAACAACACATGGAGGGAATTGGCAAAAACTCAAAAGATTC
TGATACGAGCTTCTTTCAAAAAGCTCGGCAGACCACATTGGAGGGTTTAG
CGGCTCTGAAGCGCTCCATTAGTGGCAGCCGGGAGAAGGAGAGGGAGGAG
AGGGAGGAAATGTGCCGTAAGGAGGTAGTTTTTGGAGAGAGGGGTTACGG
AACTTGTCCGTCCTCCGAGCTTGAGCAAGACATGCATCGCATGATGCAGG
CAGCTGTTGACGTTTTGAAGGAACCGACTGAGAGTCCCACGCGTAATACT
ACTCGTTTGCATGCACCTGAGCTTTACCACCCGGAATCGGTGACTAGCTA
CGAAGAATTGAGGAAACGGAATGCGACAGGTAAGGAAATGGAAGGAGAGT
CAGATATAGACGCCACCACGCAACAAGTCGTGTCGAAGATGTTTGATGCA
AGTGGTGAAGAGACAAAGCCAGAAGGTCTCGAGGTCGAGGAGAAGGAAAA
CCAGTCTGTCATCGACAGCCTGGGAAGCAAAGCCACAGGAATCGTCGAAA
AGATGGGAGCTATGACACAAAGTACACAAGACATCAAAGACAACAACGAA
GAGGATCAAGAAGATGATGCCCTGGAAATGATGCAGAT
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Synonyms
Publications