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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100302g1.811.mrna |
| Orig protein id | gnl|cribi|Naga_100302g1.811 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:873366..875760 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6219 ID=rna6219|Name=rna6219|organism=Nannochloropsis gaditana|type=mRNA|length=516bp
ATGGAGGGGTGGTCTTTTGTCTGGGAAGGAGGGAAACGGGAGGAAGGAGG
GAGGGGAGAAGGAAGCGAAGAAAGGAGGGAGTTCTCGCAAGAGGTCCTGG
TGCAGCAGTCGCCCCCCCGTCACCTCGTCTCCCCCGCCCCCTGTTTCCAC
AGGCAACGGCAGCGGCAGCGCGTACCCTCAGAGGGTGAACCCCCCGGGCT
CGACCTCGTCTCCCTTCGGCGATTTCGGTTCTGGAGGCGCCAGCACGCCT
GGACCAAGTGGAGCCCCCCCCGGCTCCGTGTACGCCCCCTACTACTTCAA
CATCGGAAGCGTCGAGTCCTTCGAACGAAAGCTGGAGAGCGTGCAGGTGA
GGGGGCGGGCAGGAAGGGAGGGAGGAGTGAAAGGAGGGAGACTACCTTAA
GGGGCTGGGGAGACGCGTTCCCCTCCGAAGCCGGGAGCCCTCACGACCTG
ACGGCTCCTCCTAACCTCCCCCTCTCTCCTTCCTTCCTGCCCATCTCCCT
CCTCAGCGCGACTTGA back to topprotein sequence of rna6219 >rna6219-protein ID=rna6219-protein|Name=rna6219|organism=Nannochloropsis gaditana|type=polypeptide|length=286bp
MNIYFFQWHFQRRSLAPTTVVWATKRVGWFKPLERKVSHLSSSSTCSPCL
SCFSHPRGKQAHRKTRRQFDSREHACRGVDNIFQAYRDGLLQFYLAACQA
PEYLKLNSDVPCILARSTSGGSFLSPVVSHRGHTLHADLPLRPFFPLPFF
HHPCGEALVACAERLRAILSQGGRICERGSQWKRRGRSAERGQGRRPSRQ
PAAATAPKRRRGWRGWGGRRRLWRTWRWGPCGLERAAADVYHRVDGARSP
IILRARREGNILAGVCDSGPGVRGGGAHHCQQPERG back to topmRNA from alignment at CM002467.1:873366..875760- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6219 ID=rna6219|Name=rna6219|organism=Nannochloropsis gaditana|type=mRNA|length=2395bp|location=Sequence derived from alignment at CM002467.1:873366..875760- (Nannochloropsis gaditana)
ATGAATATATACTTCTTTCAATGGCATTTTCAGCGCCGTAGCCTGGCTCC
GACGACAGTCGTATGGGCAACAAAGAGAGTCGGCTGGTTCAAACCCCTTG
AAAGAAAAGTCTCCCACCTTAGCTCCTCATCGACCTGCTCGCCTTGTCTT
TCCTGCTTCAGCCACCCGCGAGGAGTTATTGTGGCGTTGTGGGAGGGTGC
CCAGCGTACTCTGCTTCAACAGAGCGAGAGTGAAATGCTGTGCGATTTGT
CATGTGAAAGTCATATCCTCCTCCTTGCATGAAATTCACTTCAGAGGCAA
TTATTCCAGTAATTCTCCTTCTTTTCCACTGGCTCTGCTTCTCTCAAATA
TGCAGGCACTATTTTTTGGGTTATAGTTTCCTGTGAGTTATATATACGCG
GGCGCTTTCTCGGTGGGTTATTTTTCCATAGAACCCTGCCTGGAGTACCA
TTCATCTGCCTCGAGTGCCCATTTCTCACGAAGTGGTGGTAGATATTTCA
TAAATGTCATCTCTTTAAGATTATTGCGTCATATAATACCAAGAAGTCTT
CCTCACGCCTCGCCAGACCATGCACACACATGCACGTCGGCGGCGACATA
GTACACTCCATGTACACATTTCCCATAGCATAAAAACTCTTTATTGAGTA
CTATGAAGAATGTGAGATCAATATCATTCCTACATATGAATATTGCAGAA
ATCAGTTTCAAGGAAGAACGGAGGTGCGTGATGATGGTATGTCGAAAGCG
TGCGGCGCCTCAATTGATCTGGTTGCAGGCGCGTGGCTCCGCTTTCCCCG
GCAATCCTCCCCGGAGGAGAGACGATGACTCACCCCGACGCCAACGCCGA
GCGGCGTGGGGCACTACAGAGCACACTTAACCGAAAATCTGGCCAGGCAT
GCTGCCAGAGGCCGGGCTGTGATGTATGGAGGGACATTTGAAATTTTGGA
CGTGGACCGGCGGCGTTCGTAGGGATTTGGTCTGGCATGCCCGCATTCTG
ACATCAGGAGCAGAAGTCTCAGCTTCGATCCTCTTTCTTGGCCTTGGAGT
GCGCCACTGGCGACTCCTACGTTTGAACACTGGATAGGGTGCAATAGTGT
ATAGTGATTCATGGAGCTTGCGTGATGCGGGGGGCCATGCAGGGTAATCT
GTGTGCGCCTTTCTTTTTCAGACGAGCAGGACTTCCAAAGGGCAGAAGCA
AGGAGGAAGCTCCTGCAGGCTGCTGTATTCTAGATCGGAGACGCAGCTAA
TTTTTTTTACCACACATTGAACCGGAAGCTCTAGAAACAGGCACATCGAA
AGACACGTCGCCAGTTTGACAGTCGTGAGCACGCGTGCCGAGGGGTTGAC
AACATTTTTCAAGCTTACAGGGACGGTTTGCTTCAATTCTACTTAGCCGC
TTGCCAGGCACCAGAATACCTGAAGCTAAACTCCGATGTACCGTGCATCC
TTGCGCGCAGCACGTCAGGTATATAGACTTAGGGAAAAGTGTATGCACCA
GGATTGTATCGGATAGTAATAGCCGGGCACATGGGAAACCTGCCATTGTG
CCGTGTGTCAGCGCGTCGACCCCTTATCTGTGTCTTCACCCGTCTTGGAA
CAAACCATCACAGGGGGGAGCTTTCTGTCTCCGGTCGTCTCGCACAGGGG
CCACACTCTCCATGCGGACCTTCCCCTCCGTCCCTTCTTCCCACTCCCCT
TCTTTCACCACCCTTGTGGAGAGGCTCTGGTCGCGTGTGCCGAAAGGCTT
CGGGCAATTTTATCCCAAGGAGGGAGGATCTGCGAGCGAGGAAGCCAATG
GAAAAGGTGAGTGGTAGTTGGATATCATATGGAAAGAGACGTGGGGAAGA
AGGCGGAGAGCTGACCGAGCAGTGTGGAGGATTCTGACGGAGGTACCCTG
GTCCACTCACAGGCGGGGACGGAGCGCGGAAAGAGGACAAGGGAGACGGC
CCTCACGCCAACCAGCAGCAGCAACAGCACCAAAAAGGCGGAGGGGGTGG
AGGGGGTGGGGGGGGCGGAGGCGGCTTTGGAGGACCTGGAGGTGGGGGCC
CTGCGGACTCGAACGGGCGGCTGCTGACGTCTATCATAGGTAGGCCAGGG
GGTGGGACGGGGAGAGGAGTTCCACGCTCTAGGGAGGCATTTTGGAAAGG
TAGAATGGTTCTTGTCTTTTGCGCCACAAGAGAACACTGGTGGTATGACC
CTAGCTTAATTTGCCCCTCCTCCCCCCCTCCCTATTCTCCCTTCCCCCTC
CTCTCTTACCAGGGTTGACGGCGCTCGGTCTCCTATTATCCTCCGAGCCC
GCCGGGAAGGAAATATCCTGGCAGGAGTTTGTGACTCAGGTCCTGGAGTC
CGGGGAGGTGGAGCGCATCATTGTCAGCAACCGGAACGTGGCTAA back to topCoding sequence (CDS) from alignment at CM002467.1:873366..875760- >rna6219 ID=rna6219|Name=rna6219|organism=Nannochloropsis gaditana|type=CDS|length=4305bp|location=Sequence derived from alignment at CM002467.1:873366..875760- (Nannochloropsis gaditana)
GGTTGACGGCGCTCGGTCTCCTATTATCCTCCGAGCCCGCCGGGAAGGAA
ATATCCTGGCAGGAGTTTGTGACTCAGGTCCTGGAGTCCGGGGAGGTGGA
GCGCATCATTGTCAGCAACCGGAACGTGGCTAAGCGGGGACGGAGCGCGG
AAAGAGGACAAGGGAGACGGCCCTCACGCCAACCAGCAGCAGCAACAGCA
CCAAAAAGGCGGAGGGGGTGGAGGGGGTGGGGGGGGCGGAGGCGGCTTTG
GAGGACCTGGAGGTGGGGGCCCTGCGGACTCGAACGGGCGGCTGCTGACG
TCTATCATAGGGGGGAGCTTTCTGTCTCCGGTCGTCTCGCACAGGGGCCA
CACTCTCCATGCGGACCTTCCCCTCCGTCCCTTCTTCCCACTCCCCTTCT
TTCACCACCCTTGTGGAGAGGCTCTGGTCGCGTGTGCCGAAAGGCTTCGG
GCAATTTTATCCCAAGGAGGGAGGATCTGCGAGCGAGGAAGCCAATGGAA
AAGAAACAGGCACATCGAAAGACACGTCGCCAGTTTGACAGTCGTGAGCA
CGCGTGCCGAGGGGTTGACAACATTTTTCAAGCTTACAGGGACGGTTTGC
TTCAATTCTACTTAGCCGCTTGCCAGGCACCAGAATACCTGAAGCTAAAC
TCCGATGTACCGTGCATCCTTGCGCGCAGCACGTCAGATGAATATATACT
TCTTTCAATGGCATTTTCAGCGCCGTAGCCTGGCTCCGACGACAGTCGTA
TGGGCAACAAAGAGAGTCGGCTGGTTCAAACCCCTTGAAAGAAAAGTCTC
CCACCTTAGCTCCTCATCGACCTGCTCGCCTTGTCTTTCCTGCTTCAGCC
ACCCGCGAGGAGGTTGACGGCGCTCGGTCTCCTATTATCCTCCGAGCCCG
CCGGGAAGGAAATATCCTGGCAGGAGTTTGTGACTCAGGTCCTGGAGTCC
GGGGAGGTGGAGCGCATCATTGTCAGCAACCGGAACGTGGCTAAGCGGGG
ACGGAGCGCGGAAAGAGGACAAGGGAGACGGCCCTCACGCCAACCAGCAG
CAGCAACAGCACCAAAAAGGCGGAGGGGGTGGAGGGGGTGGGGGGGGCGG
AGGCGGCTTTGGAGGACCTGGAGGTGGGGGCCCTGCGGACTCGAACGGGC
GGCTGCTGACGTCTATCATAGGGGGGAGCTTTCTGTCTCCGGTCGTCTCG
CACAGGGGCCACACTCTCCATGCGGACCTTCCCCTCCGTCCCTTCTTCCC
ACTCCCCTTCTTTCACCACCCTTGTGGAGAGGCTCTGGTCGCGTGTGCCG
AAAGGCTTCGGGCAATTTTATCCCAAGGAGGGAGGATCTGCGAGCGAGGA
AGCCAATGGAAAAGAAACAGGCACATCGAAAGACACGTCGCCAGTTTGAC
AGTCGTGAGCACGCGTGCCGAGGGGTTGACAACATTTTTCAAGCTTACAG
GGACGGTTTGCTTCAATTCTACTTAGCCGCTTGCCAGGCACCAGAATACC
TGAAGCTAAACTCCGATGTACCGTGCATCCTTGCGCGCAGCACGTCAGAT
GAATATATACTTCTTTCAATGGCATTTTCAGCGCCGTAGCCTGGCTCCGA
CGACAGTCGTATGGGCAACAAAGAGAGTCGGCTGGTTCAAACCCCTTGAA
AGAAAAGTCTCCCACCTTAGCTCCTCATCGACCTGCTCGCCTTGTCTTTC
CTGCTTCAGCCACCCGCGAGGAGGTTGACGGCGCTCGGTCTCCTATTATC
CTCCGAGCCCGCCGGGAAGGAAATATCCTGGCAGGAGTTTGTGACTCAGG
TCCTGGAGTCCGGGGAGGTGGAGCGCATCATTGTCAGCAACCGGAACGTG
GCTAAGCGGGGACGGAGCGCGGAAAGAGGACAAGGGAGACGGCCCTCACG
CCAACCAGCAGCAGCAACAGCACCAAAAAGGCGGAGGGGGTGGAGGGGGT
GGGGGGGGCGGAGGCGGCTTTGGAGGACCTGGAGGTGGGGGCCCTGCGGA
CTCGAACGGGCGGCTGCTGACGTCTATCATAGGGGGGAGCTTTCTGTCTC
CGGTCGTCTCGCACAGGGGCCACACTCTCCATGCGGACCTTCCCCTCCGT
CCCTTCTTCCCACTCCCCTTCTTTCACCACCCTTGTGGAGAGGCTCTGGT
CGCGTGTGCCGAAAGGCTTCGGGCAATTTTATCCCAAGGAGGGAGGATCT
GCGAGCGAGGAAGCCAATGGAAAAGAAACAGGCACATCGAAAGACACGTC
GCCAGTTTGACAGTCGTGAGCACGCGTGCCGAGGGGTTGACAACATTTTT
CAAGCTTACAGGGACGGTTTGCTTCAATTCTACTTAGCCGCTTGCCAGGC
ACCAGAATACCTGAAGCTAAACTCCGATGTACCGTGCATCCTTGCGCGCA
GCACGTCAGATGAATATATACTTCTTTCAATGGCATTTTCAGCGCCGTAG
CCTGGCTCCGACGACAGTCGTATGGGCAACAAAGAGAGTCGGCTGGTTCA
AACCCCTTGAAAGAAAAGTCTCCCACCTTAGCTCCTCATCGACCTGCTCG
CCTTGTCTTTCCTGCTTCAGCCACCCGCGAGGAGGTTGACGGCGCTCGGT
CTCCTATTATCCTCCGAGCCCGCCGGGAAGGAAATATCCTGGCAGGAGTT
TGTGACTCAGGTCCTGGAGTCCGGGGAGGTGGAGCGCATCATTGTCAGCA
ACCGGAACGTGGCTAAGCGGGGACGGAGCGCGGAAAGAGGACAAGGGAGA
CGGCCCTCACGCCAACCAGCAGCAGCAACAGCACCAAAAAGGCGGAGGGG
GTGGAGGGGGTGGGGGGGGCGGAGGCGGCTTTGGAGGACCTGGAGGTGGG
GGCCCTGCGGACTCGAACGGGCGGCTGCTGACGTCTATCATAGGGGGGAG
CTTTCTGTCTCCGGTCGTCTCGCACAGGGGCCACACTCTCCATGCGGACC
TTCCCCTCCGTCCCTTCTTCCCACTCCCCTTCTTTCACCACCCTTGTGGA
GAGGCTCTGGTCGCGTGTGCCGAAAGGCTTCGGGCAATTTTATCCCAAGG
AGGGAGGATCTGCGAGCGAGGAAGCCAATGGAAAAGAAACAGGCACATCG
AAAGACACGTCGCCAGTTTGACAGTCGTGAGCACGCGTGCCGAGGGGTTG
ACAACATTTTTCAAGCTTACAGGGACGGTTTGCTTCAATTCTACTTAGCC
GCTTGCCAGGCACCAGAATACCTGAAGCTAAACTCCGATGTACCGTGCAT
CCTTGCGCGCAGCACGTCAGATGAATATATACTTCTTTCAATGGCATTTT
CAGCGCCGTAGCCTGGCTCCGACGACAGTCGTATGGGCAACAAAGAGAGT
CGGCTGGTTCAAACCCCTTGAAAGAAAAGTCTCCCACCTTAGCTCCTCAT
CGACCTGCTCGCCTTGTCTTTCCTGCTTCAGCCACCCGCGAGGAGGTTGA
CGGCGCTCGGTCTCCTATTATCCTCCGAGCCCGCCGGGAAGGAAATATCC
TGGCAGGAGTTTGTGACTCAGGTCCTGGAGTCCGGGGAGGTGGAGCGCAT
CATTGTCAGCAACCGGAACGTGGCTAAGCGGGGACGGAGCGCGGAAAGAG
GACAAGGGAGACGGCCCTCACGCCAACCAGCAGCAGCAACAGCACCAAAA
AGGCGGAGGGGGTGGAGGGGGTGGGGGGGGCGGAGGCGGCTTTGGAGGAC
CTGGAGGTGGGGGCCCTGCGGACTCGAACGGGCGGCTGCTGACGTCTATC
ATAGGGGGGAGCTTTCTGTCTCCGGTCGTCTCGCACAGGGGCCACACTCT
CCATGCGGACCTTCCCCTCCGTCCCTTCTTCCCACTCCCCTTCTTTCACC
ACCCTTGTGGAGAGGCTCTGGTCGCGTGTGCCGAAAGGCTTCGGGCAATT
TTATCCCAAGGAGGGAGGATCTGCGAGCGAGGAAGCCAATGGAAAAGAAA
CAGGCACATCGAAAGACACGTCGCCAGTTTGACAGTCGTGAGCACGCGTG
CCGAGGGGTTGACAACATTTTTCAAGCTTACAGGGACGGTTTGCTTCAAT
TCTACTTAGCCGCTTGCCAGGCACCAGAATACCTGAAGCTAAACTCCGAT
GTACCGTGCATCCTTGCGCGCAGCACGTCAGATGAATATATACTTCTTTC
AATGGCATTTTCAGCGCCGTAGCCTGGCTCCGACGACAGTCGTATGGGCA
ACAAAGAGAGTCGGCTGGTTCAAACCCCTTGAAAGAAAAGTCTCCCACCT
TAGCTCCTCATCGACCTGCTCGCCTTGTCTTTCCTGCTTCAGCCACCCGC
GAGGA back to top
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