rna6209, rna6209 (mRNA) Nannochloropsis gaditana

Overview
Namerna6209
Unique Namerna6209
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length564
Alignment locationCM002467.1:844848..846115 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101548g1.3663.mrna
Orig protein idgnl|cribi|Naga_101548g1.3663
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:844848..846115 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101548g1gene5998Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6209rna6209-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24479.1cds6194Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6209 ID=rna6209|Name=rna6209|organism=Nannochloropsis gaditana|type=mRNA|length=564bp
CGCGCAGTCCACACCGGCAAGGAGCGGTCTCTCCCCGCCTACTTCAACTC
CCAGGCCGCCCAACCCCACATTCTCAACGCGGACAACTTCCAGCAGCTGA
CGCACGACACATTTAGGTGCGAGATGGCTCCCATCCAATTTTTTACTGCC
TCCATTGTTCCCGTCGTCGATGTCCGACTCACCGTGGACGCTGTAGCAGG
GACGGCTGTGATTCGCGCAATTTCTGGGCAGGTCAAGCACAGCACGAAGC
CACTCGATCTTAAGGAAGCGCAGGAGGCAGGATACGTTCACACAGGCCCG
GGGCGCTTCGACGAACTCTCTTTCCAGATGGACACCACCAACATCGTCTC
TTGGCAAAAGGTGGATGATCGCACCGTTGCCCTCACGTCTCGCATTGAGA
TGGAGATCAGCATGGAGAAGCCGGGCTGGATGCTCGTGCCCTCCTCGATG
ATGAACCGTGTGGGCTCCATGGTCCTGCATCGAATTTTGAAGAAAACTCT
GCCTGAATTCCTTGACCGCATCAAAAATGGGTACACGGGCTGGGAAGGGG
AGATGGTGGTGTAA
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protein sequence of rna6209

>rna6209-protein ID=rna6209-protein|Name=rna6209|organism=Nannochloropsis gaditana|type=polypeptide|length=165bp
MRPIFLHLTPVLCPIFLLAVVVSLVEAGWLGYLFGGKDATPTATLTQSPA
TLEACEAVLVTNMTETVQESVTDAESRLLSSSRTTFRAERTQTMRIESTE
GGEAGEEGGMEGREVDARCDGHGDGEEAESGSKEGARGRRKRDEGSGRRR
GREEKGACLPLTTLW
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mRNA from alignment at CM002467.1:844848..846115-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6209 ID=rna6209|Name=rna6209|organism=Nannochloropsis gaditana|type=mRNA|length=1268bp|location=Sequence derived from alignment at CM002467.1:844848..846115- (Nannochloropsis gaditana)
CAAAGCAAGCAATGCCAAGCGCTTGCACTCATACCAATTTATTTCCACTA
AGCATGCTGAGCCAATCGTAGCCTTTCGGGTTGCTCAAATGGCGTCTTTG
ACTTAACAACGCCAATTTTATCAGACAGCGTCATCTCGGTCTATCCTCCA
ACGCAAAGACATATTTGCCGAGCCGACAGGCGCGTGTTTAAAGCATGAGA
AATATATTTGAAAGGGACACTGTTCATTGACATGGCTAGAAATAGCTCAC
AGCATTCATTGTGGGTGGGGCATTTGTCATAAAATTGATGGTATCCGAGA
AAAAGACTGATTTCTTAAATTCCCCATGTCCCACTCACTTTCATCACTTT
TCGGTACGGAGGCGCAGTGGTAGGACGCGGCGTGGAATTTCAGACCATCA
CCACGCAGTGGTGAAAAATCGCAATTTGCGAGCTCTAATCAAGCGTCGAT
GAGGCCTATTTTCCTGCACCTTACCCCTGTCCTGTGCCCCATTTTTCTTC
TGGCCGTGGTGGTCAGTCTTGTCGAAGCGGGATGGCTGGGGTACCTCTTT
GGAGGCAAAGACGCGACGCCTGTAAGTGAAAATATATCACGAAAGCCGTG
ATCTTATCCATTCAAATGCCTGCCAAATTCTAGTCGGTGCATTTTCACGC
GAAGTCACGAGCAATAATTGCGGAATAGAGGCCTCGATCTCAGCAATACC
ATGCCATATCTCTTTCCCTCCGGCACGTCACAGACCGCCACGTTGACACA
ATCGCCGGCAACTCTTGAAGCCTGCGAGGCGGTGCTCGTCACAAACATGA
CTGAAACAGTCCAGGAATCGGTCACAGACGGTACGGAGCGCAGGGAGGCG
GGGCGGAGGCCGGTAGGGATGCACAATGGGGGAAGACATGGACGAGTGCC
TTGGAGTTGTGGGTTCAATTCTCGACGTAGCTTTGCGAGTACATCAATGC
ATGCAGCGTGAATAAGCGCTGGCCCTCTTATCCGTATTCACAGCGGAAAG
TCGCCTCTTGTCCTCCTCCCGGACTACCTTCCGAGCCGAACGGACGCAGA
CAATGCGGATAGAGAGTACGGAGGGAGGGGAGGCGGGGGAGGAGGGAGGA
ATGGAAGGGAGGGAGGTAGATGCTCGCTGCGATGGACATGGGGATGGAGA
GGAAGCGGAGAGTGGGAGCAAGGAGGGAGCGAGAGGGAGACGGAAGAGGG
ACGAGGGCAGCGGCCGGCGACGAGGAAGAGAGGAGAAGGGGGCCTGTCTG
CCGCTCACGACCCTATGG
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Coding sequence (CDS) from alignment at CM002467.1:844848..846115-

>rna6209 ID=rna6209|Name=rna6209|organism=Nannochloropsis gaditana|type=CDS|length=1485bp|location=Sequence derived from alignment at CM002467.1:844848..846115- (Nannochloropsis gaditana)
CGGAAAGTCGCCTCTTGTCCTCCTCCCGGACTACCTTCCGAGCCGAACGG
ACGCAGACAATGCGGATAGAGAGTACGGAGGGAGGGGAGGCGGGGGAGGA
GGGAGGAATGGAAGGGAGGGAGGTAGATGCTCGCTGCGATGGACATGGGG
ATGGAGAGGAAGCGGAGAGTGGGAGCAAGGAGGGAGCGAGAGGGAGACGG
AAGAGGGACGAGGGCAGCGGCCGGCGACGAGGAAGAGAGGAGAAGGGGGC
CTGTCTGCCGCTCACGACCCTATGGACCGCCACGTTGACACAATCGCCGG
CAACTCTTGAAGCCTGCGAGGCGGTGCTCGTCACAAACATGACTGAAACA
GTCCAGGAATCGGTCACAGACGATGAGGCCTATTTTCCTGCACCTTACCC
CTGTCCTGTGCCCCATTTTTCTTCTGGCCGTGGTGGTCAGTCTTGTCGAA
GCGGGATGGCTGGGGTACCTCTTTGGAGGCAAAGACGCGACGCCTCGGAA
AGTCGCCTCTTGTCCTCCTCCCGGACTACCTTCCGAGCCGAACGGACGCA
GACAATGCGGATAGAGAGTACGGAGGGAGGGGAGGCGGGGGAGGAGGGAG
GAATGGAAGGGAGGGAGGTAGATGCTCGCTGCGATGGACATGGGGATGGA
GAGGAAGCGGAGAGTGGGAGCAAGGAGGGAGCGAGAGGGAGACGGAAGAG
GGACGAGGGCAGCGGCCGGCGACGAGGAAGAGAGGAGAAGGGGGCCTGTC
TGCCGCTCACGACCCTATGGACCGCCACGTTGACACAATCGCCGGCAACT
CTTGAAGCCTGCGAGGCGGTGCTCGTCACAAACATGACTGAAACAGTCCA
GGAATCGGTCACAGACGATGAGGCCTATTTTCCTGCACCTTACCCCTGTC
CTGTGCCCCATTTTTCTTCTGGCCGTGGTGGTCAGTCTTGTCGAAGCGGG
ATGGCTGGGGTACCTCTTTGGAGGCAAAGACGCGACGCCTCGGAAAGTCG
CCTCTTGTCCTCCTCCCGGACTACCTTCCGAGCCGAACGGACGCAGACAA
TGCGGATAGAGAGTACGGAGGGAGGGGAGGCGGGGGAGGAGGGAGGAATG
GAAGGGAGGGAGGTAGATGCTCGCTGCGATGGACATGGGGATGGAGAGGA
AGCGGAGAGTGGGAGCAAGGAGGGAGCGAGAGGGAGACGGAAGAGGGACG
AGGGCAGCGGCCGGCGACGAGGAAGAGAGGAGAAGGGGGCCTGTCTGCCG
CTCACGACCCTATGGACCGCCACGTTGACACAATCGCCGGCAACTCTTGA
AGCCTGCGAGGCGGTGCTCGTCACAAACATGACTGAAACAGTCCAGGAAT
CGGTCACAGACGATGAGGCCTATTTTCCTGCACCTTACCCCTGTCCTGTG
CCCCATTTTTCTTCTGGCCGTGGTGGTCAGTCTTGTCGAAGCGGGATGGC
TGGGGTACCTCTTTGGAGGCAAAGACGCGACGCCT
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Synonyms
Publications