|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100662g4.4386.mrna |
| Orig protein id | gnl|cribi|Naga_100662g4.4386 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:836450..837108 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6206 ID=rna6206|Name=rna6206|organism=Nannochloropsis gaditana|type=mRNA|length=741bp
ATGACCAGAAAGGAAAAAAGTATTTCGGAAAAAGTCCGTTCGCACGCGCT
TTTCGGTGGCGCCATCACGATTTCCCTTCCAGCTTCCTTCTCCAGTGCCA
GTGACATACGACAAGTTCCCGACAACCAAGAAGTGTTCATCGACGATGCC
TCAGACGCCTCCCTCATCCTCGAGCTCTTGGATTTGGAGCGTGACAAGGA
GGGACTGGAGGCCGCTACCTATTTCTTCAACGACTTGGCCGAGCACAATG
ACGCCCAAAACGCCACTATCCAATACAAAGAAGACTTGAGCGGAACGAGC
CTGGTGCCTAATTTGGCAGCCTACCCCACATACGCCCTGGTAGGCACGCA
AACTGTCTCCAAATTCCACGCAGCGGATGCAGCGTTGTTGCCTGTTCGGA
TATACCTAGTCAATGTTCGTCTCCAACAGACGGGCACAGACGTACTTCTG
ACGCTAAACCTGCCCGCCCTGGCGCAAGCACCTGCTGCTGCTTCTTTCAA
TGCGGCGATGTTTGTCAAGGGAAACGTGTGCCCCGATTCAGGGATGGCAG
CTTTACAGGAAGCGCTAGCAAGCCTTACCATTAGGAACTGGGGCTTATTC
GGCGGTGCAATTAGAATTAGAGAATCAGTACAGCATGAGTATACACACAT
CACAGCCAGACAAGACGGAGTCGGGTGGGCATTCAGTATACGTCTCTTAA
AAGTCTCAAACAATGCATTAATTAAGTCGAGAGAAGCGTAA back to topprotein sequence of rna6206 >rna6206-protein ID=rna6206-protein|Name=rna6206|organism=Nannochloropsis gaditana|type=polypeptide|length=130bp
MPAMKSSTAGKKMKGVGKAAANGAGPASKVTPKVEDMDRKALQTLAKSLG
LKANVKTVELIAAIQEHYQHGAFTAPPASVALSSPSADALPTTAESKTSG
RARSSQEKSVKVKQSGGEGKGGMVLEALSR back to topmRNA from alignment at CM002467.1:836450..837108+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6206 ID=rna6206|Name=rna6206|organism=Nannochloropsis gaditana|type=mRNA|length=659bp|location=Sequence derived from alignment at CM002467.1:836450..837108+ (Nannochloropsis gaditana)
TCAGCCTGTATTACGCTTGTAGTAACACGCAGCGCTTATTTAACAGATAT
GCCCGCCATGAAGAGCTCAACCGCTggcaaaaaaatgaaaggagTCGGTA
AAGCCGCCGCAAACGGGGCTGGTCCTGCTTCCAAAGTAACCCCCAAGGTG
GAGGATATGGACAGGAAAGCTTTACAGGTATTCAGATTGTAATTTATTAG
AGAAATTAAACAAATGAAATGACAAGTGAAGAATGACAGGACAAGCAAAA
AGGACTCAGTAAACGTCGTGTGGGGAATACCGAAATGTGTGTGCACAGAC
GTACACCGACGCGTTTGAATGCTCGATTGCCGGCAAATTAGGATCGTTGG
CCCCCCGACAAGACTCTCCGTTTTTTATAATCACCTGCTCTCCAGACACT
TGCCAAATCCCTGGGCTTGAAAGCGAACGTTAAGACGGTGGAATTGATCG
CGGCTATCCAGGAGCATTACCAGCATGGTGCCttcaccgccccgcccgcc
tcggtGGCcttgtcttctccctctgccgACGCTCTTCCCACAACTGCGGA
GAGCAAGACATCGGGCCGTGCGAGGAGCAGTCAGGAAAAGAGCGTGAAGG
TGAAACAATCCGGGggtgaagggaagggtggcatGGTTCTGGAGGCGTTA
TCGCGGTaa back to topCoding sequence (CDS) from alignment at CM002467.1:836450..837108+ >rna6206 ID=rna6206|Name=rna6206|organism=Nannochloropsis gaditana|type=CDS|length=786bp|location=Sequence derived from alignment at CM002467.1:836450..837108+ (Nannochloropsis gaditana)
ATGCCCGCCATGAAGAGCTCAACCGCTggcaaaaaaatgaaaggagTCGG
TAAAGCCGCCGCAAACGGGGCTGGTCCTGCTTCCAAAGTAACCCCCAAGG
TGGAGGATATGGACAGGAAAGCTTTACAGACACTTGCCAAATCCCTGGGC
TTGAAAGCGAACGTTAAGACGGTGGAATTGATCGCGGCTATCCAGGAGCA
TTACCAGCATGGTGCCttcaccgccccgcccgcctcggtGGCcttgtctt
ctccctctgccgACGCTCTTCCCACAACTGCGGAGAGCAAGACATCGGGC
CGTGCGAGGAGCAGTCAGGAAAAGAGCGTGAAGGTGAAACAATCCGGGgg
tgaagggaagggtggcatGGTTCTGGAGGCGTTATCGCGGTaaATGCCCG
CCATGAAGAGCTCAACCGCTggcaaaaaaatgaaaggagTCGGTAAAGCC
GCCGCAAACGGGGCTGGTCCTGCTTCCAAAGTAACCCCCAAGGTGGAGGA
TATGGACAGGAAAGCTTTACAGACACTTGCCAAATCCCTGGGCTTGAAAG
CGAACGTTAAGACGGTGGAATTGATCGCGGCTATCCAGGAGCATTACCAG
CATGGTGCCttcaccgccccgcccgcctcggtGGCcttgtcttctccctc
tgccgACGCTCTTCCCACAACTGCGGAGAGCAAGACATCGGGCCGTGCGA
GGAGCAGTCAGGAAAAGAGCGTGAAGGTGAAACAATCCGGGggtgaaggg
aagggtggcatGGTTCTGGAGGCGTTATCGCGGTaa back to top
|