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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100129g6.1879.mrna |
| Orig protein id | gnl|cribi|Naga_100129g6.1879 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:178870..179675 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna62 ID=rna62|Name=rna62|organism=Nannochloropsis gaditana|type=mRNA|length=2750bp
ATACAGATGCACAGGATGGGTAATGCCTGGCCATTACCCACTGGGCTCAG
CGCCTTTTGATGCGCTTTTCGTCTTCACGTTAAAGCCCTCCCAAGTGCTG
TGTCGCGTACACGCCGGTAATACGCCCAAATCGCGGGTGGTCAACCAACC
GTTCCCTATTCCTCTTCCAAGAGCATGCACGGAGGCTGCTGCGGCGGCCT
GACCGGGTCTGAAGAGAATAACCTTGAGAATCAAGGTCTTTATCCCCCAC
ACCCGCCACCGTACGTCGCACCCCCTTCGCCGCCGCAGCTTTATGAGGTA
CCGAATGAATTGGACCTTGCCCAGCCCTTCCTCCAAGAACCTTTTCCACT
TTGGACGGACCCCGGGCAGGAAGAAGGAGACGATCGCAGTTGGATCAGTG
GTGCGAGCACTGACAGGGGCCCCGATCTCCCCCGAGTTGCCCGCGGCGGG
CAGAGCCAGTGTAGTGAGACAAGTAGCAGTACGGCCGGAGGGCGAGCTGC
CAAGAAGCGAACCCTGTCGAATCCGCAGACGAGTCGATGGTTGACGTGCC
AGTTGTGCCGAGAGAGTAAAACCAAATGTGACGGGGCGTTCCCCTGCTCG
CGATGCTGGAACCGGATGTGCGTGTGCTGTCGGCCTCAGCAGCATACCCT
TGAAAGCGTGGCTCCGAGTCCGGGGCCGGGGGCGAAAAAACGCCGACGCC
GACGGGCGTTGCCGGAGGAAGTGACGGACCTGCTGGAGGAAGAGAAGCAG
GACGAGGCGATGGAGGTGGCGGGAAGCACCCCGTACGTGCATTTGGTTTT
CCTCCGCTCCCGGCCCCAGCCTCTGGTGGAAGTTTTCCTTCGGACCTTTG
GGGAGATGTACCTGGAGGAGCAACGGGGAGGGGCGAGGGCAGGGGGGGAG
GGAGGGAGGGACGGTCGGGGTTTCGATCGGGGGAAAGCGGTGCGATTATT
GCGGTGTTGGCAGGAGCGGAGTACCTATGTCGGGACGGACGTGACGCACG
GGATATTGCCTGCCTTGACGGGCTTGTTCCAGGTAACCGGGGAGGAACTG
GGGGAGGGAGGGGACAAGGAGGGCGGGACGGAGGGCGGGGCCGGGGCACA
CCCGCAATCCACGGAGGCGATGTTGGTGGCGGCGGAACGGTTGAGGGGCT
CGTGGGCCTCGGCTTGGGTGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGG
GGGGAGGGAGGGGCACAGGACGGTGGGGTCCTGCTCGCGGTCAGCGACGG
CACTCTCCTCCACTGGGTGGGCAACGCGGCCTTCGACCGGCTCTTTTTGA
GCGTGGCAGGTCTCTTGAACGAGTCCATGGCACGCCGGCGCTTGCCTATC
CTCCTCTTCGCCGCACTACTCCACCCACAAGATCGGCCCGTCTGGTTTCG
TGGCGTCATTCGCGCACTTTTTACCTCCCCCGGCCCCGCGCCATGCACGA
CGGGTCTCGTGGGGGAATGGGAGGGCGACGGAGTGGCTGGTCGTGAGGGT
GGTGTGGCGCCTGCTTCCCGCCCTCCTACCCCTCCTCCCTCCTTCCCTCC
CCGACTCCCTCCCCCGTCCCATGTCATCAAAGCGATTGACCGGGAGGGAC
GGATTTCCACCTACCATTTGACCGTAACGGCCCTCAACCGTCGCGTGCGT
CCTCCTCCCGGTTCTTCGGCGTCGGCCACGGAAGGAGAGGATGGGGGGAA
AGAAGGGGCAGTAGAGGAGCACGGGATGGTGATTGTTTTGGTTCCTGTGC
CCGAAACCAAAGAGGGGGGGCAGGGTGGCACCGCTCCCCCTAATGCGCCT
GTAGGGGATACAGGAGAAGGGGAAAGGGAAGTGGGAGGTGGAGGTAGGAA
GACGAGGCGGGCAGAGTCCAAGAGGAGAGGGCAGGGTGGTGGGACGGAGG
CCCTGACGCATCAATCCGCTGCTTCTCGACGAGGGAGGGGACGGTTTTCC
TCCGCTTGTGCCTCTTGTCCTCCCTCGGCCACCTCCAGCAGCCCTTCGTT
ACCCCCTTGGCCGGGCAACACTTTAGTCACCCCTCCCTCTCCTTCCCACT
CCCTGGCCGGCCTATTCCCTCCCTTTGCCGCTTCCTCCTCGTCCTCCTCC
TGTGCCGCCTCCTCCTCGTCCTCCTCCTCTGCCGCCGAGCCGGCGACCCA
CCCTCTGCTGCAGTATTTGCACATGGGGGGCGAAGGCAAGCCCGTGGATG
GAAGGGCCTCACAGAGCATCCACTCGATTGCTTACCCCCCAGTGCATCCC
CCCGAGGGTCTCGCCGGGCGAGCAGGGCGGGAGGGTGGGAGGGAGGGAGG
CGGGAAGACAGTCAGGAAAGGAAAGACGGAGGAGGAGCCGGTGGGCGGGT
GCTGTCAGCGCATTCACCCACCGGAACGGGTCTGGGCCCCTCCTTCCTAC
TCGAACTCCGCCGCCCCCCCTCCTCCTCTTCTACCTCCGCCCATGCTCCC
TGCCTTCTCCTCCCTTCCGGTCCCTTCCCACAGGCCTCCGCCCTACCTTC
CCTCCCTCCCTCCCCCAGGGGCGTCTTTGGAGGTGGCCGGTCCTCTGCCC
ACCATTTCTCATTCCGCGGAAGCCATCAACCGGGCGGGGCCTGACTCAGG
AGAGGGAGAGGGGTCAAAGGAAGGAAGGGAAGAAGGGATGGAACATGGAG
GGGAGGATTTCATGCGAGATGAGGGATTGCGCGCAGACCATGAAATATAA
GGCGGGAGGAGGGGCAACAAAGCAAAAGATGAAAAAAGTTGTTTTTTCCC back to topprotein sequence of rna62 >rna62-protein ID=rna62-protein|Name=rna62|organism=Nannochloropsis gaditana|type=polypeptide|length=146bp
MEESPNVHYPSYFPNKEDKSISSASTGTGKGWGEKERDSALLSLPSPVIW
EGEASGSCLIACFISPSHSQIEAGGLLPTCDGTEGAVESRGDVEQDASVA
VPSSLASLPPPSFCSPAVSVLKERADFLGLTQRGKPNRCAICSRFC back to topmRNA from alignment at CM002455.1:178870..179675+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna62 ID=rna62|Name=rna62|organism=Nannochloropsis gaditana|type=mRNA|length=806bp|location=Sequence derived from alignment at CM002455.1:178870..179675+ (Nannochloropsis gaditana)
AAATTCTTTCTGCTGTTCAATTTGATAACATTGCCTCCTTGACCATATTT
CCGTGGACAAATGTTGAAATCCAATTTTTATTGCTGTAAGAACGTCATAT
TTTAGACCGTACATCAATAGGAATCTGGCGCACTCCTGCAAATCAACAAC
CGTTCATTTCCCCAGAAGCCCTCATGCAAATGTAAATTTTTTTATGGAGG
AATCCCCAAACGTTCATTACCCTTCATATTTTCCAAACAAAGAAGATAAA
TCCATCTCGTCGGCCAGTACGGGCACgggaaaagggtggggagagaaaga
gagagattccgccctgctttccctcccttcacctGTAatatgggagggag
aagcctcTGGCTCCTGCTTGATCGCATGTTTCATTTCTCCTTCGCACTCA
CAGATAGAAGCAGGCGGACTTCTGCCGACCTGCGATGGTACTGAAGGAGC
TGTGGAGTCCCGGGGGGATGTTGAGCAAGACGCCTCAGTTGCGGTTCCAA
GTTCGTTGGCCAgtctcccgcccccgtctTTCTGCTCCCCTGCCGTTTCC
GTGCTAAAAGAAAGGGCCGATTTCTTGGGCTTGACCCAAAGAGGTAAGCC
GAATAGATGTGCGATATGTTCAAGGTTTTGTTGAAGCAAGTAGCCCCGAA
GGGTGGCACCGATTTCATCCCCCACAATGGCACTGAAATGTGGGTAAGAC
ACCAAAGATAAGGAGGGTCGGAGGGACGAAGTGGAAGACGATGACCCACT
GTCCGCTTCCGTAGAGGAGATGGCGACGACAGAATCAACCAAATTCCTCT
CCTGTG back to topCoding sequence (CDS) from alignment at CM002455.1:178870..179675+ >rna62 ID=rna62|Name=rna62|organism=Nannochloropsis gaditana|type=CDS|length=441bp|location=Sequence derived from alignment at CM002455.1:178870..179675+ (Nannochloropsis gaditana)
ATGGAGGAATCCCCAAACGTTCATTACCCTTCATATTTTCCAAACAAAGA
AGATAAATCCATCTCGTCGGCCAGTACGGGCACgggaaaagggtggggag
agaaagagagagattccgccctgctttccctcccttcacctGTAatatgg
gagggagaagcctcTGGCTCCTGCTTGATCGCATGTTTCATTTCTCCTTC
GCACTCACAGATAGAAGCAGGCGGACTTCTGCCGACCTGCGATGGTACTG
AAGGAGCTGTGGAGTCCCGGGGGGATGTTGAGCAAGACGCCTCAGTTGCG
GTTCCAAGTTCGTTGGCCAgtctcccgcccccgtctTTCTGCTCCCCTGC
CGTTTCCGTGCTAAAAGAAAGGGCCGATTTCTTGGGCTTGACCCAAAGAG
GTAAGCCGAATAGATGTGCGATATGTTCAAGGTTTTGTTGA back to top
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